Entry: PS00641

General information about the entry
Entry name COMPLEX1_75K_1
Accession number PS00641
Entry type PATTERN
Date JUN-1992 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00554
Name and characterization of the entry
DescriptionRespiratory-chain NADH dehydrogenase 75 Kd subunit signature 1.
Pattern P-x(2)-C-[YWSD]-x(7)-[GA]-x-C-R-x-C.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 44 hits in 44 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 44 hits in 44 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 1
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 97.78 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 3,iron_sulfur(?)
  • `Interesting' site in the pattern: 8,iron_sulfur(?)
  • `Interesting' site in the pattern: 11,iron_sulfur(?)
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
HOXU_CUPNH  (P22318), NDUS1_ARATH (Q9FGI6), NDUS1_BOVIN (P15690), 
NDUS1_DICCI (Q2LCP5), NDUS1_DICDI (Q34312), NDUS1_DROME (Q94511), 
NDUS1_GORGO (Q0MQG1), NDUS1_HUMAN (P28331), NDUS1_MACFA (Q4R6K9), 
NDUS1_MOUSE (Q91VD9), NDUS1_NEUCR (P24918), NDUS1_PANTR (Q0MQG2), 
NDUS1_PONAB (P0CB67), NDUS1_PONPY (P0CB68), NDUS1_RAT   (Q66HF1), 
NDUS1_RECAM (O21241), NDUS1_SOLTU (Q43644), NQO3_PARDE  (P29915), 
NQO3_THET8  (Q56223), NUOG2_RHIME (P56914), NUOG_BLOFL  (Q7VRV7), 
NUOG_BUCAI  (P57257), NUOG_BUCAP  (Q8K9Y2), NUOG_BUCBP  (Q89AU1), 
NUOG_ECO57  (Q8XCX2), NUOG_ECOL6  (Q8FFJ9), NUOG_ECOLI  (P33602), 
NUOG_MYCBO  (P59962), NUOG_MYCTU  (P95175), NUOG_PSEAE  (Q9I0J6), 
NUOG_PSEFL  (Q9KGW3), NUOG_PSEPK  (Q88FH2), NUOG_PSESM  (Q87ZQ4), 
NUOG_RICBR  (Q1RKD2), NUOG_RICCN  (Q92G92), NUOG_RICFE  (Q4UK22), 
NUOG_RICPR  (Q9ZCF6), NUOG_RICTY  (Q68VV2), NUOG_SALTI  (P0A1Y5), 
NUOG_SALTY  (P0A1Y4), NUOG_SHEON  (Q8EI34), NUOG_SHIFL  (Q7UC56), 
NUOG_STRCO  (Q9XAR0), NUOG_YERPE  (Q8ZDL2)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
NDUS1_ACACA (Q37373)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
HOXU_RHOOP  (P22659), NDUS1_MESAU (P86203)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 2FUG; 2YBB; 3I9V; 3IAM; 3IAS; 3M9S; 4HEA;

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