Entry: PS00659

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General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F5
Accession [info] PS00659
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00565

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 5 signature.
Pattern [info]
[LIV]-[LIVMFYWGA](2)-[DNEQG]-[LIVMGST]-{SENR}-N-E-[PV]-[RHDNSTLIVFY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 172 in 172 different sequences
Number of true positive hits 78 in 78 different sequences
Number of 'unknown' hits
Number of false positive hits 94 in 94 different sequences
Number of false negative sequences 69
Number of 'partial' sequences 5
Precision (true positives / (true positives + false positives)) 45.35 %
Recall (true positives / (true positives + false negatives)) 53.06 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 7
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
78 sequences

EGCSE_CYANO (Q9GV16), EGCSE_HYDVU (Q6L6S1), EXG1_CANAL  (P29717), 
EXG1_HANAN  (O93939), EXG1_SCHPO  (Q9URU6), EXG1_YEAST  (P23776), 
EXG2_CANAL  (Q5AIA1), EXG2_HANAN  (O93983), EXG2_YEAST  (P52911), 
EXG3_SCHPO  (O74799), EXG_CANOL   (Q8NKF9), EXG_KLULA   (Q12628), 
EXG_LACK1   (Q875R9), EXG_PICAN   (Q12626), EXG_SACU7   (Q876J3), 
EXG_SCHOC   (Q12700), EXG_YARLI   (Q12725), GUN1_ACIC1  (P54583), 
GUN1_BACCJ  (P06566), GUN1_BACIU  (P07983), GUN1_BUTFI  (P20847), 
GUN1_CRYFL  (Q04469), GUN1_RUMAL  (P16216), GUN2_BACCJ  (P06565), 
GUN2_BACSU  (P10475), GUN2_HYPJE  (P07982), GUN3_BACCJ  (P19570), 
GUN3_BACIU  (P23549), GUN3_FIBSS  (P14250), GUN4_RUMAL  (Q07940), 
GUN5_BACAG  (O85465), GUN5_THEFU  (Q01786), GUNA_BUTFI  (P22541), 
GUNA_CLOCE  (P17901), GUNA_CLOLO  (P54937), GUNA_PAEBA  (O08342), 
GUNA_RUMAL  (P23660), GUNA_RUMFL  (P16169), GUNA_STRLI  (P27035), 
GUNA_XANCP  (P19487), GUNB_CALSA  (P10474), GUNB_CLOC7  (P28621), 
GUNB_CLOTH  (P04956), GUNB_NEOPA  (Q12647), GUNB_PAELA  (P23550), 
GUNB_RUMAL  (P23661), GUNC_CELJU  (P27033), GUNC_CLOSF  (P23340), 
GUNC_CLOTH  (A3DJ77), GUNC_CLOTM  (P0C2S3), GUND_CELFI  (P50400), 
GUND_CLOC7  (P28623), GUND_CLOCE  (P25472), GUNE_CLOTM  (P10477), 
GUNG_CLOTH  (Q05332), GUNH_CLOTH  (P16218), GUNN_PECAT  (Q59394), 
GUNV_PECCC  (Q47096), GUNW_PECSS  (Q59395), GUNZ_DICD3  (P07103), 
GUN_BACA3   (P06564), GUN_BACS6   (P19424), GUN_CLOSA   (P15704), 
GUN_PAEPO   (P23548), GUN_RALSL   (P17974), GUN_RALSO   (P58599), 
GUN_ROBSP   (P23044), MAN1_ORYSJ  (Q0JKM9), MAN2_ORYSJ  (Q0JJD4), 
MAN7_ORYSJ  (Q2RBB1), MAN8_ORYSJ  (Q0IQJ7), MANA_STRLI  (P51529), 
MANB_CALSA  (P22533), SPR1_SACU7  (Q876J2), SPR1_YEAST  (P32603), 
XYNA_THESA  (P36917), XYNX_CLOTM  (P38535), YIS7_YEAST  (P40566)
» More

UniProtKB/Swiss-Prot
False negative sequences
69 sequences

6GAL_HYPRU  (Q76FP5), EXG2_SCHPO  (Q10444), EXGA_ASPCL  (A1CRV0), 
EXGA_ASPFC  (B0XN12), EXGA_ASPFN  (B8N151), EXGA_ASPFU  (Q4WK60), 
EXGA_ASPNC  (A2RAR6), EXGA_ASPOR  (Q7Z9L3), EXGA_ASPTN  (Q0CR35), 
EXGA_EMENI  (Q5B5X8), EXGA_NEOFI  (A1D4Q5), EXGB_ASPFC  (B0XRX9), 
EXGB_ASPFN  (B8NBJ4), EXGB_ASPFU  (Q4X1N4), EXGB_ASPOR  (Q2TZQ9), 
EXGB_ASPTN  (Q0C8Z0), EXGB_EMENI  (Q5B6Q3), EXGB_NEOFI  (A1DGM6), 
EXGD_ASPCL  (A1CTI3), EXGD_ASPFC  (B0Y7W2), EXGD_ASPFN  (B8NNK9), 
EXGD_ASPFU  (Q4WMP0), EXGD_ASPNC  (A2QX52), EXGD_ASPOR  (Q2UMV7), 
EXGD_ASPTN  (Q0CHZ8), EXGD_EMENI  (Q5AVZ7), EXGD_NEOFI  (A1DMX4), 
EXG_BLUGR   (Q96V64), GUN3_HUMIN  (Q12624), MAN1_ARATH  (Q9FZ29), 
MAN1_SOLLC  (O48540), MAN2_ARATH  (Q7Y223), MAN2_SOLLC  (Q9FZ03), 
MAN3_ARATH  (Q9SG94), MAN3_ORYSJ  (Q0DM48), MAN3_SOLLC  (Q9FUQ6), 
MAN4_ARATH  (Q9SG95), MAN4_ORYSJ  (Q10B67), MAN4_SOLLC  (Q8L5J1), 
MAN5_ARATH  (Q9M0H6), MAN5_ORYSJ  (Q5W6G0), MAN5_SOLLC  (Q6YM50), 
MAN6_ARATH  (Q9LZV3), MAN6_ORYSJ  (Q0DCM5), MAN7_ARATH  (Q9FJZ3), 
MAN9_ORYSJ  (Q6Z310), MANA1_ASPTN (Q0CCD0), MANA2_ASPTN (Q0CUG5), 
MANA_ASPAC  (Q00012), MANA_ASPCL  (A1CGC6), MANA_ASPFN  (B8NVK8), 
MANA_ASPNC  (A2QKT4), MANA_ASPOR  (Q2TXJ2), MANA_EMENI  (Q5B7X2), 
MANA_MYTED  (Q8WPJ2), MANA_NEOFI  (A1D8Y6), MANB_EMENI  (Q5B833), 
MANC_ASPTN  (Q0C8J3), MANC_EMENI  (Q5AZ53), MAND_EMENI  (Q5AVP1), 
MANF_ASPCL  (A1C8U0), MANF_ASPFC  (B0Y9E7), MANF_ASPFN  (B8NIV9), 
MANF_ASPFU  (Q4WBS1), MANF_ASPOR  (Q2U2I3), MANF_EMENI  (Q5AR04), 
MANF_NEOFI  (A1DBV1), MANP_ARATH  (Q9LW44), YBQ6_YEAST  (P38081)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
5 sequences

EXG_PSEMZ   (P85924), GUN1_ACRSP  (P82288), GUNA_GLOTR  (P84194), 
GUNB_GLOTR  (P84196), GUN_SCHCO   (P81190)
» More

UniProtKB/Swiss-Prot
False positive sequences
94 sequences

AGAR_PSEAF  (P13734), AL4A1_DANRE (Q7SY23), AMPA_HELHP  (Q7VGF0), 
ARCA_PSEPK  (Q88P52), ARCA_PSEPU  (P41142), ASPL2_ARATH (Q9S9K4), 
ATG4_ASHGO  (Q75E61), ATPF1_NITHX (Q1QRI1), CO041_BOVIN (Q5E9S8), 
CO041_HUMAN (Q9Y2V0), CO041_MOUSE (Q3U4G0), CO041_XENLA (Q6NRW5), 
CO041_XENTR (Q28HL3), COX1_BACP3  (P16262), CYAA_SCHPO  (P14605), 
DEN_HHV7J   (P52362), F16A1_BURP8 (B2JEJ7), F16A1_BURXL (Q13V64), 
F16A3_PSEHT (Q3ICJ5), F16PA_ACIAD (Q6F982), F16PA_ACISJ (A1W9H6), 
F16PA_BURPP (B2T699), F16PA_BURS3 (Q39IJ4), F16PA_CAUSK (B0T0R1), 
F16PA_CELJU (B3PGC8), F16PA_HERAR (A4G2P0), F16PA_HERSE (A2RQ29), 
F16PA_IDILO (Q5QVR9), F16PA_PSYA2 (Q4FUA6), F16PA_PSYCK (Q1QDE0), 
F16PA_RALPJ (B2U8C4), F16PA_RALSO (Q8XXI7), F16PA_SHEAM (A1S351), 
F16PA_SHEB9 (A9L375), F16PA_SHEDO (Q12JW2), F16PA_SHEFN (Q088C3), 
F16PA_SHEHH (B0TTL6), F16PA_SHELP (A3QAZ7), F16PA_SHEON (Q8EAB6), 
F16PA_SHEPA (A8H0H1), F16PA_SHESA (A0KSW7), F16PA_SHESH (A8FRF1), 
F16PA_SHESM (Q0HMI8), F16PA_SHESR (Q0HRA0), F16PA_SHESW (A1RNR2), 
G6PI_PSEFL  (Q848I4), G6PI_PSEPF  (Q3K6Q4), GCSP_BACFN  (Q5LDN2), 
GCSP_BACFR  (Q64UQ7), HAP2_ARATH  (F4JP36), ILVB2_BRANA (P14874), 
JHD1_SCHPO  (O94603), MACF1_HUMAN (Q9UPN3), MACF1_MOUSE (Q9QXZ0), 
MACF1_RAT   (D3ZHV2), MICA1_DANRE (E7F9T0), MYOD_TOXGO  (Q9XYF6), 
NADL2_HUMAN (Q58DX5), OBSCN_HUMAN (Q5VST9), PAC_ARTVI   (P31956), 
PAC_BACME   (Q60136), PNPT1_HUMAN (Q8TCS8), PNPT1_MOUSE (Q8K1R3), 
PNPT1_PONAB (Q5RCW2), PROB_CLOAB  (Q97E63), PRUNE_BOVIN (Q5E9Y6), 
PRUNE_HUMAN (Q86TP1), PRUNE_MOUSE (Q8BIW1), PRUNE_RAT   (Q6AYG3), 
PSA_NAKMY   (C8XAQ3), PTCD3_DANRE (Q32LU7), PURL_SULSO  (Q9UX24), 
RECR_AZOC5  (A8IGX4), RFT1_CANGA  (Q6FPE8), RL25_RUEPO  (Q5LV90), 
RNH2_THEPD  (A1RYM0), RPPH_BORBR  (Q7WFP0), RPPH_BORPA  (Q7W482), 
RPPH_BORPE  (Q7VTZ7), RPPH_NITMU  (Q2YBW4), RUVC_THIDA  (Q3SGT0), 
SC15A_ARATH (Q9LXX6), SDK2_MOUSE  (Q6V4S5), SP100_MUSCR (O35893), 
SYFB_PROMP  (Q7V1J8), Y1530_RUBXD (Q1AVT6), Y2148_CALS8 (A4XLE5), 
Y2677_OCEIH (Q8EN13), Y526_SYNWW  (Q0AZJ4), Y5392_ARATH (Q9FID6), 
YB0G_SCHPO  (P87157), YBX7_SCHPO  (Q10201), YCSF_BACSU  (P42963), 
YL786_MIMIV (Q5UPR9)
» More

PDB
[Detailed view]
46 PDB

1A3H; 1CEC; 1CZ1; 1E5J; 1ECE; 1EDG; 1EGZ; 1EQC; 1EQP; 1G01; 1G0C; 1H11; 1H2J; 1H4P; 1H5V; 1HF6; 1OCQ; 1QHZ; 1QI0; 1QI2; 1VRX; 1W3K; 1W3L; 2A3H; 2CKR; 2CKS; 2PB1; 2PBO; 2PC8; 2PF0; 2V38; 3A3H; 3N9K; 3NDY; 3NDZ; 3O6A; 3PZT; 3PZU; 3PZV; 3QR3; 4A3H; 4IM4; 5A3H; 6A3H; 7A3H; 8A3H
» More

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