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Entry: PS00659

General information about the entry

Entry name [info] GLYCOSYL_HYDROL_F5
Accession [info] PS00659
Entry type [info] PATTERN
Date [info] JUN-1992 (CREATED); DEC-2004 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00565

Name and characterization of the entry

Description [info] Glycosyl hydrolases family 5 signature.
Pattern [info]
[LIV]-[LIVMFYWGA](2)-[DNEQG]-[LIVMGST]-{SENR}-N-E-[PV]-[RHDNSTLIVFY].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 174 in 174 different sequences
Number of true positive hits 79 in 79 different sequences
Number of 'unknown' hits 0
Number of false positive hits 95 in 95 different sequences
Number of false negative sequences 69
Number of 'partial' sequences 5
Precision (true positives / (true positives + false positives)) 45.40 %
Recall (true positives / (true positives + false negatives)) 53.38 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 7
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
79 sequences

CELE_CLOTH  (P10477    ), EGCSE_CYANO (Q9GV16    ), EGCSE_HYDVU (Q6L6S1    ), 
EXG1_CANAL  (P29717    ), EXG1_SCHPO  (Q9URU6    ), EXG1_WICAO  (O93939    ), 
EXG1_YEAST  (P23776    ), EXG2_CANAL  (Q5AIA1    ), EXG2_WICAO  (O93983    ), 
EXG2_YEAST  (P52911    ), EXG3_SCHPO  (O74799    ), EXG_CANOL   (Q8NKF9    ), 
EXG_KLULA   (Q12628    ), EXG_LACK1   (Q875R9    ), EXG_PICAN   (Q12626    ), 
EXG_SACU7   (Q876J3    ), EXG_SCHOC   (Q12700    ), EXG_YARLI   (Q12725    ), 
GUN1_ACIC1  (P54583    ), GUN1_BACCJ  (P06566    ), GUN1_BACIU  (P07983    ), 
GUN1_BUTFI  (P20847    ), GUN1_CRYFL  (Q04469    ), GUN1_RUMAL  (P16216    ), 
GUN2_BACCJ  (P06565    ), GUN2_BACSU  (P10475    ), GUN2_HYPJE  (P07982    ), 
GUN3_BACCJ  (P19570    ), GUN3_BACIU  (P23549    ), GUN3_FIBSS  (P14250    ), 
GUN4_RUMAL  (Q07940    ), GUN5_BACAG  (O85465    ), GUN5_THEFU  (Q01786    ), 
GUNA_BUTFI  (P22541    ), GUNA_CLOCE  (P17901    ), GUNA_CLOLO  (P54937    ), 
GUNA_PAEBA  (O08342    ), GUNA_RUMAL  (P23660    ), GUNA_RUMFL  (P16169    ), 
GUNA_STRLI  (P27035    ), GUNA_XANCP  (P19487    ), GUNB_CALSA  (P10474    ), 
GUNB_CLOC7  (P28621    ), GUNB_CLOTH  (P04956    ), GUNB_NEOPA  (Q12647    ), 
GUNB_PAELA  (P23550    ), GUNB_RUMAL  (P23661    ), GUNC_CELJU  (P27033    ), 
GUNC_CLOSF  (P23340    ), GUNC_CLOTH  (A3DJ77    ), GUNC_CLOTM  (P0C2S3    ), 
GUND_CELFI  (P50400    ), GUND_CLOC7  (P28623    ), GUND_CLOCE  (P25472    ), 
GUNG_CLOTH  (Q05332    ), GUNH_CLOTH  (P16218    ), GUNN_PECAT  (Q59394    ), 
GUNV_PECCC  (Q47096    ), GUNW_PECSS  (Q59395    ), GUNZ_DICD3  (P07103    ), 
GUN_BACA3   (P06564    ), GUN_BACS6   (P19424    ), GUN_CLOSA   (P15704    ), 
GUN_PAEPO   (P23548    ), GUN_RALSL   (P17974    ), GUN_RALSO   (P58599    ), 
GUN_ROBSP   (P23044    ), MAN1_ORYSJ  (Q0JKM9    ), MAN2_ORYSJ  (Q0JJD4    ), 
MAN5_CELJU  (B3PF24    ), MAN7_ORYSJ  (Q2RBB1    ), MAN8_ORYSJ  (Q0IQJ7    ), 
MANA_STRLI  (P51529    ), MANB_CALSA  (P22533    ), SPR1_SACU7  (Q876J2    ), 
SPR1_YEAST  (P32603    ), XYNA_THESA  (P36917    ), XYNX_CLOTM  (P38535    ), 
YIS7_YEAST  (P40566    )
» more

UniProtKB/Swiss-Prot
False negative sequences
69 sequences

6GAL_HYPRU  (Q76FP5    ), EXG2_SCHPO  (Q10444    ), EXGA_ASPCL  (A1CRV0    ), 
EXGA_ASPFC  (B0XN12    ), EXGA_ASPFN  (B8N151    ), EXGA_ASPFU  (Q4WK60    ), 
EXGA_ASPNC  (A2RAR6    ), EXGA_ASPOR  (Q7Z9L3    ), EXGA_ASPTN  (Q0CR35    ), 
EXGA_EMENI  (Q5B5X8    ), EXGA_NEOFI  (A1D4Q5    ), EXGB_ASPFC  (B0XRX9    ), 
EXGB_ASPFN  (B8NBJ4    ), EXGB_ASPFU  (Q4X1N4    ), EXGB_ASPOR  (Q2TZQ9    ), 
EXGB_ASPTN  (Q0C8Z0    ), EXGB_EMENI  (Q5B6Q3    ), EXGB_NEOFI  (A1DGM6    ), 
EXGD_ASPCL  (A1CTI3    ), EXGD_ASPFC  (B0Y7W2    ), EXGD_ASPFN  (B8NNK9    ), 
EXGD_ASPFU  (Q4WMP0    ), EXGD_ASPNC  (A2QX52    ), EXGD_ASPOR  (Q2UMV7    ), 
EXGD_ASPTN  (Q0CHZ8    ), EXGD_EMENI  (Q5AVZ7    ), EXGD_NEOFI  (A1DMX4    ), 
EXG_BLUGR   (Q96V64    ), GUN3_HUMIN  (Q12624    ), MAN1_ARATH  (Q9FZ29    ), 
MAN1_SOLLC  (O48540    ), MAN2_ARATH  (Q7Y223    ), MAN2_SOLLC  (Q9FZ03    ), 
MAN3_ARATH  (Q9SG94    ), MAN3_ORYSJ  (Q0DM48    ), MAN3_SOLLC  (Q9FUQ6    ), 
MAN4_ARATH  (Q9SG95    ), MAN4_ORYSJ  (Q10B67    ), MAN4_SOLLC  (Q8L5J1    ), 
MAN5_ARATH  (Q9M0H6    ), MAN5_ORYSJ  (Q5W6G0    ), MAN5_SOLLC  (Q6YM50    ), 
MAN6_ARATH  (Q9LZV3    ), MAN6_ORYSJ  (Q0DCM5    ), MAN7_ARATH  (Q9FJZ3    ), 
MAN9_ORYSJ  (Q6Z310    ), MANA1_ASPTN (Q0CCD0    ), MANA2_ASPTN (Q0CUG5    ), 
MANA_ASPAC  (Q00012    ), MANA_ASPCL  (A1CGC6    ), MANA_ASPFN  (B8NVK8    ), 
MANA_ASPNC  (A2QKT4    ), MANA_ASPOR  (Q2TXJ2    ), MANA_EMENI  (Q5B7X2    ), 
MANA_MYTED  (Q8WPJ2    ), MANA_NEOFI  (A1D8Y6    ), MANB_EMENI  (Q5B833    ), 
MANC_ASPTN  (Q0C8J3    ), MANC_EMENI  (Q5AZ53    ), MAND_EMENI  (Q5AVP1    ), 
MANF_ASPCL  (A1C8U0    ), MANF_ASPFC  (B0Y9E7    ), MANF_ASPFN  (B8NIV9    ), 
MANF_ASPFU  (Q4WBS1    ), MANF_ASPOR  (Q2U2I3    ), MANF_EMENI  (Q5AR04    ), 
MANF_NEOFI  (A1DBV1    ), MANP_ARATH  (Q9LW44    ), YBQ6_YEAST  (P38081    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
5 sequences

EXG_PSEMZ   (P85924    ), GUN1_ACRSP  (P82288    ), GUNA_GLOTR  (P84194    ), 
GUNB_GLOTR  (P84196    ), GUN_SCHCO   (P81190    )
» more

UniProtKB/Swiss-Prot
False positive sequences
95 sequences

AGAR_PSEAF  (P13734    ), AL4A1_DANRE (Q7SY23    ), AMPA_HELHP  (Q7VGF0    ), 
ARCA_PSEPK  (Q88P52    ), ARCA_PSEPU  (P41142    ), ASPL2_ARATH (Q9S9K4    ), 
ATG4_ASHGO  (Q75E61    ), ATPF1_NITHX (Q1QRI1    ), CO041_BOVIN (Q5E9S8    ), 
CO041_HUMAN (Q9Y2V0    ), CO041_MOUSE (Q3U4G0    ), CO041_XENLA (Q6NRW5    ), 
CO041_XENTR (Q28HL3    ), COX1_BACP3  (P16262    ), CYAA_SCHPO  (P14605    ), 
F16A1_BURXL (Q13V64    ), F16A1_PARP8 (B2JEJ7    ), F16A3_PSEHT (Q3ICJ5    ), 
F16PA_ACIAD (Q6F982    ), F16PA_ACISJ (A1W9H6    ), F16PA_BURL3 (Q39IJ4    ), 
F16PA_CAUSK (B0T0R1    ), F16PA_CELJU (B3PGC8    ), F16PA_HERAR (A4G2P0    ), 
F16PA_HERSE (A2RQ29    ), F16PA_IDILO (Q5QVR9    ), F16PA_PARPJ (B2T699    ), 
F16PA_PSYA2 (Q4FUA6    ), F16PA_PSYCK (Q1QDE0    ), F16PA_RALPJ (B2U8C4    ), 
F16PA_RALSO (Q8XXI7    ), F16PA_SHEAM (A1S351    ), F16PA_SHEB9 (A9L375    ), 
F16PA_SHEDO (Q12JW2    ), F16PA_SHEFN (Q088C3    ), F16PA_SHEHH (B0TTL6    ), 
F16PA_SHELP (A3QAZ7    ), F16PA_SHEON (Q8EAB6    ), F16PA_SHEPA (A8H0H1    ), 
F16PA_SHESA (A0KSW7    ), F16PA_SHESH (A8FRF1    ), F16PA_SHESM (Q0HMI8    ), 
F16PA_SHESR (Q0HRA0    ), F16PA_SHESW (A1RNR2    ), G6PI_PSEFL  (Q848I4    ), 
G6PI_PSEPF  (Q3K6Q4    ), GCSP_BACFN  (Q5LDN2    ), GCSP_BACFR  (Q64UQ7    ), 
HAP2_ARATH  (F4JP36    ), ILVB2_BRANA (P14874    ), JHD1_SCHPO  (O94603    ), 
LTP_HHV7J   (P52362    ), MACF1_HUMAN (Q9UPN3    ), MACF1_MOUSE (Q9QXZ0    ), 
MACF1_RAT   (D3ZHV2    ), MICA1_DANRE (E7F9T0    ), MYOD_TOXGO  (Q9XYF6    ), 
NADL2_HUMAN (Q58DX5    ), OBSCN_HUMAN (Q5VST9    ), PAC_ARTVI   (P31956    ), 
PAC_BACME   (Q60136    ), PNPT1_HUMAN (Q8TCS8    ), PNPT1_MOUSE (Q8K1R3    ), 
PNPT1_PONAB (Q5RCW2    ), PROB_CLOAB  (Q97E63    ), PRUNE_BOVIN (Q5E9Y6    ), 
PRUNE_HUMAN (Q86TP1    ), PRUNE_MOUSE (Q8BIW1    ), PRUNE_RAT   (Q6AYG3    ), 
PSA_NAKMY   (C8XAQ3    ), PTCD3_DANRE (Q32LU7    ), PURL_SULSO  (Q9UX24    ), 
R213A_DANRE (A0A0R4IBK5), RECR_AZOC5  (A8IGX4    ), RFT1_CANGA  (Q6FPE8    ), 
RL25_RUEPO  (Q5LV90    ), RNH2_THEPD  (A1RYM0    ), RPPH_BORBR  (Q7WFP0    ), 
RPPH_BORPA  (Q7W482    ), RPPH_BORPE  (Q7VTZ7    ), RPPH_NITMU  (Q2YBW4    ), 
RUVC_THIDA  (Q3SGT0    ), SC15A_ARATH (Q9LXX6    ), SDK2_MOUSE  (Q6V4S5    ), 
SP100_MUSCR (O35893    ), SYFB_PROMP  (Q7V1J8    ), Y1530_RUBXD (Q1AVT6    ), 
Y2148_CALS8 (A4XLE5    ), Y2677_OCEIH (Q8EN13    ), Y526_SYNWW  (Q0AZJ4    ), 
Y5392_ARATH (Q9FID6    ), YB0G_SCHPO  (P87157    ), YBX7_SCHPO  (Q10201    ), 
YCSF_BACSU  (P42963    ), YL786_MIMIV (Q5UPR9    )
» more

PDB
[Detailed view]
54 PDB

1A3H; 1CEC; 1CZ1; 1E5J; 1ECE; 1EDG; 1EGZ; 1EQC; 1EQP; 1G01; 1G0C; 1H11; 1H2J; 1H4P; 1H5V; 1HF6; 1OCQ; 1QHZ; 1QI0; 1QI2; 1VRX; 1W3K; 1W3L; 2A3H; 2CKR; 2CKS; 2PB1; 2PBO; 2PC8; 2PF0; 2V38; 3A3H; 3N9K; 3NDY; 3NDZ; 3O6A; 3PZT; 3PZU; 3PZV; 3QR3; 4A3H; 4IM4; 4M80; 4M81; 4M82; 4TUF; 4U3A; 4U5I; 4U5K; 5A3H; 5BYW; 6A3H; 7A3H; 8A3H
» more

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