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Entry: PS00680
General information about the entry
Entry nameMAP_1
Accession numberPS00680
Entry typePATTERN
DateJUN-1992 (CREATED); APR-2006 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00575
Name and characterization of the entry
DescriptionMethionine aminopeptidase subfamily 1 signature.
Pattern[MFY]-x-G-H-G-[LIVMC]-[GSHN]-x(3)-H-x(4)-[LIVM]-x(1,2)-[HN]-[YWVHF].
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 49 hits in 49 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 49 hits in 49 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 2
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 96.08 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • `Interesting' site in the pattern: 4,cobalt
  • VERSION: 2
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
AMP1A_ARATH (Q9SLN5), AMP1B_ARATH (Q9FV52), AMP1D_ARATH (Q9FV50), 
AMP1D_DANRE (Q4VBS4), AMP1D_HUMAN (Q6UB28), AMP1D_MOUSE (Q9CPW9), 
AMPM1_BACSU (P19994), AMPM1_BOVIN (A6QLA4), AMPM1_CHICK (Q5ZIM5), 
AMPM1_DANRE (Q4QRK0), AMPM1_DICDI (Q54WU3), AMPM1_HUMAN (P53582), 
AMPM1_MOUSE (Q8BP48), AMPM1_PONAB (Q5RBF3), AMPM1_SCHPO (O59730), 
AMPM1_SYNY3 (P53579), AMPM1_XENLA (Q7ZWV9), AMPM1_XENTR (Q5I0A0), 
AMPM1_YEAST (Q01662), AMPM2_MYCTU (P0A5J2), AMPM2_SYNY3 (P53580), 
AMPM3_SYNY3 (P53581), AMPM_AQUAE  (O66489), AMPM_BACHD  (Q9Z9J4), 
AMPM_BORBU  (O51132), AMPM_BUCAI  (P57324), AMPM_BUCAP  (Q8K9T1), 
AMPM_BUCBP  (Q89AP3), AMPM_CHLMU  (Q9PL68), AMPM_CHLPN  (Q9Z6Q0), 
AMPM_CHLTR  (O84859), AMPM_CLOAB  (P69000), AMPM_CLOPE  (P50614), 
AMPM_ECO57  (P0AE20), AMPM_ECOL6  (P0AE19), AMPM_ECOLI  (P0AE18), 
AMPM_HAEIN  (P44421), AMPM_HELPJ  (Q9ZJT0), AMPM_HELPY  (P56102), 
AMPM_MYCBO  (P0A5J3), AMPM_MYCCT  (Q59509), AMPM_MYCGA  (O52353), 
AMPM_MYCGE  (P47418), AMPM_MYCPN  (Q11132), AMPM_RICPR  (Q9ZCD3), 
AMPM_SALTI  (P0A1X7), AMPM_SALTY  (P0A1X6), AMPM_SHIFL  (P0AE21), 
AMPM_TREPA  (O83814)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
AMP1C_ARATH (Q9FV51), AMP1D_DICDI (Q54VU7)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
AMPM_GEOSE  (P28617), AMPM_KLEOX  (P41392)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		1C21; 1C22; 1C23; 1C24; 1C27; 1MAT; 1XNZ; 1Y1N; 1YJ3; 1YVM; 2B3H; 2B3K; 2B3L; 2BB7; 2EVC; 2EVM; 2EVO; 2G6P; 2GG0; 2GG2; 2GG3; 2GG5; 2GG7; 2GG8; 2GG9; 2GGB; 2GGC; 2GTX; 2GU4; 2GU5; 2GU6; 2GU7; 2GZ5; 2MAT; 2NQ6; 2NQ7; 2P98; 2P99; 2P9A; 2Q92; 2Q93; 2Q94; 2Q95; 2Q96; 3D27; 3IU7; 3IU8; 3IU9; 3MAT; 3MR1; 3MX6; 3PKA; 3PKB; 3PKC; 3PKD; 3PKE; 4MAT;

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