Entry: PS00709

General information about the entry

Entry name [info] RIBOSOMAL_L30E_1
Accession [info] PS00709
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); APR-2006 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00588

Name and characterization of the entry

Description [info] Ribosomal protein L30e signature 1.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 47 in 47 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.87 %
Recall (true positives / (true positives + false negatives)) 73.02 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

True positive sequences
46 sequences

RL301_ARATH (Q9C8F7), RL302_ARATH (Q8VZ19), RL303_ARATH (Q9LSA3), 
RL30A_SCHPO (P52808), RL30B_SCHPO (Q9UTP0), RL30E_AERPE (Q9YAU3), 
RL30E_ARCFU (O28389), RL30E_METJA (P54061), RL30E_METKA (Q8TXJ0), 
RL30E_METM5 (A4FWF4), RL30E_METM6 (A9A9U8), RL30E_METM7 (A6VGV1), 
RL30E_METMP (Q6LXI6), RL30E_METTH (O27127), RL30E_METVS (P14025), 
RL30E_PYRAB (Q9V112), RL30E_PYRFU (Q8U0M6), RL30E_PYRHO (O74018), 
RL30E_SULAC (P11522), RL30E_SULSO (Q980R3), RL30E_SULTO (P58376), 
RL30E_THECE (P29160), RL30E_THESM (C6A1G2), RL30_ASHGO  (Q752U5), 
RL30_BOVIN  (Q3T0D5), RL30_BRABE  (P58374), RL30_CANGA  (Q6FXZ0), 
RL30_CHICK  (P67883), RL30_DICDI  (Q55BS9), RL30_HUMAN  (P62888), 
RL30_ICTPU  (P58372), RL30_KLULA  (P38664), RL30_LEIMA  (P39095), 
RL30_LUPLU  (O49884), RL30_MACFA  (Q76KA2), RL30_MAIZE  (O48558), 
RL30_MOUSE  (P62889), RL30_NEUCR  (Q7S7F1), RL30_OPHHA  (P67884), 
RL30_ORYSJ  (Q9SDG6), RL30_RAT    (P62890), RL30_SPOFR  (P58375), 
RL30_TRYBB  (P49153), RL30_WHEAT  (Q5I7K9), RL30_YARLI  (Q6C4U7), 
RL30_YEAST  (P14120)
» more

False negative sequences
17 sequences

RL30E_CALMQ (A8MB78), RL30E_METAC (Q8TRB9), RL30E_METB6 (A7I9N4), 
RL30E_METS3 (A5ULN4), RL30E_METST (Q2NEK6), RL30E_METTP (A0B560), 
RL30E_PYRNV (B1YC27), RL30E_THEGJ (C5A206), RL30E_THEKO (Q5JE35), 
RL30_EUPES  (Q9M5M6), RL30_TETTS  (P0DJ59)
» more

False positive sequences
1 sequence

RXL7_BACSU  (P46350)

[Detailed view]
20 PDB

1CK2; 1CN7; 1GO0; 1GO1; 1H7M; 1NMU; 1T0K; 1W3E; 1W40; 1W41; 1W42; 1YSH; 2BO1; 3CPQ; 3LFO; 3N4Y; 3N4Z; 3RA5; 3RA6; 3VI6
» more

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