Entry: PS00709

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General information about the entry

Entry name [info] RIBOSOMAL_L30E_1
Accession [info] PS00709
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00588

Name and characterization of the entry

Description [info] Ribosomal protein L30e signature 1.
Pattern [info]
[STA]-x(5)-G-x-[QKRN]-x(2)-[LIVMQ]-[KRQT]-x(2)-[KR]-x-[GS]-x(2)-[KQ]-x-
[LIVM](3).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 47 in 47 different sequences
Number of true positive hits 46 in 46 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.87 %
Recall (true positives / (true positives + false negatives)) 73.02 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
46 sequences

RL301_ARATH (Q9C8F7), RL302_ARATH (Q8VZ19), RL303_ARATH (Q9LSA3), 
RL30A_SCHPO (P52808), RL30B_SCHPO (Q9UTP0), RL30E_AERPE (Q9YAU3), 
RL30E_ARCFU (O28389), RL30E_METJA (P54061), RL30E_METKA (Q8TXJ0), 
RL30E_METM5 (A4FWF4), RL30E_METM6 (A9A9U8), RL30E_METM7 (A6VGV1), 
RL30E_METMP (Q6LXI6), RL30E_METTH (O27127), RL30E_METVS (P14025), 
RL30E_PYRAB (Q9V112), RL30E_PYRFU (Q8U0M6), RL30E_PYRHO (O74018), 
RL30E_SULAC (P11522), RL30E_SULSO (Q980R3), RL30E_SULTO (P58376), 
RL30E_THECE (P29160), RL30E_THESM (C6A1G2), RL30_ASHGO  (Q752U5), 
RL30_BOVIN  (Q3T0D5), RL30_BRABE  (P58374), RL30_CANGA  (Q6FXZ0), 
RL30_CHICK  (P67883), RL30_DICDI  (Q55BS9), RL30_HUMAN  (P62888), 
RL30_ICTPU  (P58372), RL30_KLULA  (P38664), RL30_LEIMA  (P39095), 
RL30_LUPLU  (O49884), RL30_MACFA  (Q76KA2), RL30_MAIZE  (O48558), 
RL30_MOUSE  (P62889), RL30_NEUCR  (Q7S7F1), RL30_OPHHA  (P67884), 
RL30_ORYSJ  (Q9SDG6), RL30_RAT    (P62890), RL30_SPOFR  (P58375), 
RL30_TRYBB  (P49153), RL30_WHEAT  (Q5I7K9), RL30_YARLI  (Q6C4U7), 
RL30_YEAST  (P14120)
» More

UniProtKB/Swiss-Prot
False negative sequences
17 sequences

RL30E_CALMQ (A8MB78), RL30E_METAC (Q8TRB9), RL30E_METB6 (A7I9N4), 
RL30E_METHJ (Q2FPJ8), RL30E_METMA (Q8PUR3), RL30E_METPE (B8GDW0), 
RL30E_METS3 (A5ULN4), RL30E_METST (Q2NEK6), RL30E_METTP (A0B560), 
RL30E_PYRAE (Q8ZYQ6), RL30E_PYRCJ (A3MXZ2), RL30E_PYRIL (A1RSE6), 
RL30E_PYRNV (B1YC27), RL30E_THEGJ (C5A206), RL30E_THEKO (Q5JE35), 
RL30_EUPES  (Q9M5M6), RL30_TETTS  (P0DJ59)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

RXL7_BACSU  (P46350)

		
PDB
[Detailed view]
36 PDB

1CK2; 1CN7; 1GO0; 1GO1; 1H7M; 1NMU; 1T0K; 1VW8; 1VWU; 1W3E; 1W40; 1W41; 1W42; 1YSH; 2BO1; 3CPQ; 3IZS; 3J21; 3J3B; 3J44; 3J61; 3J65; 3LFO; 3N4Y; 3N4Z; 3O58; 3O5H; 3RA5; 3RA6; 3U5E; 3U5I; 3VI6; 4B6A; 4BYN; 4BYU; 4CUW
» More

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