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Entry: PS00731

General information about the entry

Entry name [info] AP_NUCLEASE_F2_3
Accession [info] PS00731
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); OCT-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00599

Name and characterization of the entry

Description [info] AP endonucleases family 2 signature 3.
Pattern [info]
[LIVMFW]-H-x-N-[DEG]-[SA]-x(4)-[GNAQ]-x(3)-D-x-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_11 which contains 553'231 sequence entries.


Total number of hits 258 in 258 different sequences
Number of true positive hits 258 in 258 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 18
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.48 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] zinc at position 2
Site [info] zinc at position 10
Site [info] zinc at position 12
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
258 sequences

APE_ASFB7   (Q65202    ), APE_ASFK5   (P0C9C8    ), APE_ASFM2   (Q65246    ), 
APE_ASFP4   (P0C9C6    ), APE_ASFWA   (P0C9C7    ), APN1_CAEEL  (Q10002    ), 
APN1_SCHPO  (P50525    ), APN1_YEAST  (P22936    ), END4_ACHLI  (A9NFH1    ), 
END4_ACTP2  (A3MZ76    ), END4_ACTP7  (B3H0M0    ), END4_ACTPJ  (B0BTA9    ), 
END4_AERHH  (A0KK26    ), END4_AERS4  (A4SMZ0    ), END4_ALKOO  (A8ML82    ), 
END4_ANOFW  (B7GH81    ), END4_AQUAE  (O67551    ), END4_ARCB4  (A8EWW1    ), 
END4_AYWBP  (Q2NJF9    ), END4_BACAA  (C3P8J1    ), END4_BACAC  (C3LKW3    ), 
END4_BACAH  (A0RIQ8    ), END4_BACAN  (Q81LV1    ), END4_BACC0  (B7JN09    ), 
END4_BACC2  (B7IYD6    ), END4_BACC3  (C1ES07    ), END4_BACC4  (B7HCQ9    ), 
END4_BACC7  (B7HPI4    ), END4_BACCN  (A7GSY1    ), END4_BACCQ  (B9IY53    ), 
END4_BACCR  (Q818H3    ), END4_BACCZ  (Q634Q3    ), END4_BACFN  (Q5LG28    ), 
END4_BACFR  (Q64WY5    ), END4_BACHD  (Q9KD33    ), END4_BACHK  (Q6HDN3    ), 
END4_BACLD  (Q65HA0    ), END4_BACSU  (P54476    ), END4_BACTN  (Q89YT0    ), 
END4_BACV8  (A6L330    ), END4_BACVZ  (A7Z6S8    ), END4_BACWK  (A9VHR4    ), 
END4_BIFLD  (B3DS13    ), END4_BIFLO  (Q8G689    ), END4_BUCA5  (B8D8T8    ), 
END4_BUCAI  (P57237    ), END4_BUCAP  (P59058    ), END4_BUCAT  (B8D742    ), 
END4_BUCBP  (P59496    ), END4_CAMC1  (A8Z6D9    ), END4_CAMFF  (A0RRG4    ), 
END4_CARHZ  (Q3ABA7    ), END4_CENSY  (A0RYW7    ), END4_CHLAA  (A9WII8    ), 
END4_CHLAB  (Q5L798    ), END4_CHLAD  (B8G418    ), END4_CHLCH  (Q3AT74    ), 
END4_CHLCV  (Q824X6    ), END4_CHLL2  (B3EEJ7    ), END4_CHLL7  (Q3B5R5    ), 
END4_CHLMU  (Q9PJB8    ), END4_CHLP8  (B3QQA9    ), END4_CHLPM  (A4SDE2    ), 
END4_CHLPN  (Q9Z7H3    ), END4_CHLSY  (B9LAM9    ), END4_CHLT2  (B0B8K0    ), 
END4_CHLTA  (Q3KL70    ), END4_CHLTB  (B0BA79    ), END4_CHLTE  (Q8KFL0    ), 
END4_CHLTR  (O84630    ), END4_CITK8  (A8AE66    ), END4_CLOB8  (A6LQV9    ), 
END4_CLOPH  (A9KNS9    ), END4_CROS8  (A7MLL2    ), END4_DESAG  (Q30YP7    ), 
END4_DESAH  (C0QMG1    ), END4_DESOH  (A8ZSE7    ), END4_DESVH  (Q72CQ9    ), 
END4_DESVV  (A1VEI5    ), END4_DICDI  (Q966U0    ), END4_ECO24  (A7ZNY3    ), 
END4_ECO27  (B7UFH5    ), END4_ECO45  (B7MF74    ), END4_ECO55  (B7LAI2    ), 
END4_ECO57  (P0A6C2    ), END4_ECO5E  (B5YWV0    ), END4_ECO7I  (B7NMX3    ), 
END4_ECO81  (B7MX24    ), END4_ECO8A  (B7M507    ), END4_ECOBW  (C4ZU09    ), 
END4_ECODH  (B1X857    ), END4_ECOHS  (A8A222    ), END4_ECOK1  (A1AD18    ), 
END4_ECOL5  (Q0TFT1    ), END4_ECOL6  (Q8FFU0    ), END4_ECOLC  (B1IYB0    ), 
END4_ECOLI  (P0A6C1    ), END4_ECOLU  (B7N5C2    ), END4_ECOSE  (B6I8L0    ), 
END4_ECOSM  (B1LKQ6    ), END4_ECOUT  (Q1R9R2    ), END4_EDWI9  (C5BCN2    ), 
END4_ENT38  (A4WCJ5    ), END4_ENTFA  (Q834D0    ), END4_ERWT9  (B2VIH1    ), 
END4_ESCF3  (B7LVB9    ), END4_EXIS2  (B1YL88    ), END4_FINM2  (B0S196    ), 
END4_GEOBB  (B5EAS8    ), END4_GEODF  (B9M4N1    ), END4_GEOKA  (Q5KX27    ), 
END4_GEOLS  (B3E325    ), END4_GEOSL  (Q74FS7    ), END4_GEOSM  (C6DYE3    ), 
END4_GEOSW  (C5D4R0    ), END4_GEOTN  (A4IR02    ), END4_HAEDU  (Q7VMC4    ), 
END4_HAEPS  (B8F7D1    ), END4_HALHL  (A1WXM0    ), END4_HALMA  (Q5V0S8    ), 
END4_HALOH  (B8CW79    ), END4_HALS3  (B0R2U6    ), END4_HALSA  (Q9HSK7    ), 
END4_HALWD  (Q18KA6    ), END4_HELMI  (B0TD39    ), END4_HERA2  (A9B5N7    ), 
END4_KLEP3  (B5XP51    ), END4_KLEP7  (A6TBP4    ), END4_LACPL  (Q88VR2    ), 
END4_LACSS  (Q38XB2    ), END4_LISIN  (Q92BR0    ), END4_LISMC  (C1KV96    ), 
END4_LISMF  (Q71ZM1    ), END4_LISMO  (Q8Y756    ), END4_LISW6  (A0AIQ1    ), 
END4_LYSSC  (B1HTF6    ), END4_MAGMM  (A0L901    ), END4_METPE  (B8GKX5    ), 
END4_METST  (Q2NFM3    ), END4_MOOTA  (Q2RJF1    ), END4_MYCA5  (B3PMH1    ), 
END4_MYCAP  (A5IYT8    ), END4_MYCBO  (P63536    ), END4_MYCBP  (A1KGF0    ), 
END4_MYCBT  (C1AL03    ), END4_MYCGA  (Q7NBA9    ), END4_MYCGE  (P47477    ), 
END4_MYCH2  (Q601Y6    ), END4_MYCH7  (Q4A8V0    ), END4_MYCHJ  (Q4AAX4    ), 
END4_MYCLB  (B8ZSC5    ), END4_MYCLE  (P30770    ), END4_MYCMM  (B2HSJ8    ), 
END4_MYCPE  (Q8EWT2    ), END4_MYCPN  (P75457    ), END4_MYCPU  (Q98PU8    ), 
END4_MYCTA  (A5U056    ), END4_MYCTO  (P9WQ12    ), END4_MYCTU  (P9WQ13    ), 
END4_MYCUA  (A0PM27    ), END4_NATPD  (Q3IMK8    ), END4_NAUPA  (B9L9K0    ), 
END4_NITMS  (A9A555    ), END4_NITSB  (A6Q1P1    ), END4_OCEIH  (Q8EPZ2    ), 
END4_ONYPE  (Q6YQC1    ), END4_PARD8  (A6LB99    ), END4_PARUW  (Q6MED0    ), 
END4_PECAS  (Q6D3L8    ), END4_PECCP  (C6DEL1    ), END4_PEDPA  (Q03F56    ), 
END4_PELPB  (B4SE58    ), END4_PEPD6  (Q189A4    ), END4_PERMH  (C0QRI1    ), 
END4_PETMO  (A9BJ15    ), END4_PHOLL  (Q7N364    ), END4_PHOPR  (Q6LUP5    ), 
END4_PROA2  (B4S3I3    ), END4_PROMH  (B4ETA5    ), END4_SALA4  (B5EYQ5    ), 
END4_SALAR  (A9MK49    ), END4_SALCH  (Q57MD6    ), END4_SALDC  (B5FNK8    ), 
END4_SALEP  (B5R173    ), END4_SALG2  (B5RC42    ), END4_SALHS  (B4TAM6    ), 
END4_SALNS  (B4SY37    ), END4_SALPA  (Q5PE50    ), END4_SALPB  (A9N6I5    ), 
END4_SALPC  (C0Q0T7    ), END4_SALPK  (B5BE34    ), END4_SALSV  (B4TNR0    ), 
END4_SALTI  (Q8Z593    ), END4_SALTY  (Q8ZNK6    ), END4_SERP5  (A8GGT5    ), 
END4_SHIB3  (B2TVT4    ), END4_SHIBS  (Q31YW6    ), END4_SHIDS  (Q32EQ7    ), 
END4_SHIF8  (Q0T2W5    ), END4_SHIFL  (Q83QW6    ), END4_SHISS  (Q3Z047    ), 
END4_SOLUE  (Q01TU5    ), END4_STAA1  (A7X2V2    ), END4_STAA2  (A6U229    ), 
END4_STAA3  (Q2FGG6    ), END4_STAA8  (Q2FY16    ), END4_STAA9  (A5IT85    ), 
END4_STAAB  (Q2YT22    ), END4_STAAC  (Q5HFK3    ), END4_STAAE  (A6QHA0    ), 
END4_STAAM  (P63537    ), END4_STAAN  (P63538    ), END4_STAAR  (Q6GGE2    ), 
END4_STAAS  (Q6G909    ), END4_STAAT  (A8Z497    ), END4_STAAW  (P63539    ), 
END4_STACT  (B9DNM8    ), END4_STAEQ  (Q5HNZ1    ), END4_STAES  (Q8CP25    ), 
END4_STAHJ  (Q4L6Q7    ), END4_STAS1  (Q49Y00    ), END4_STRAW  (Q82AG6    ), 
END4_STRCO  (Q9S2N2    ), END4_SULDN  (Q30PH2    ), END4_SULNB  (A6QCI0    ), 
END4_SULSY  (B2V7A4    ), END4_SYMTH  (Q67S99    ), END4_THEAB  (B7IDS7    ), 
END4_THEAC  (Q9HJS3    ), END4_THEM4  (A6LMU8    ), END4_THEMA  (Q9WYJ7    ), 
END4_THENE  (O86954    ), END4_THENN  (B9KBS2    ), END4_THEP1  (A5IK54    ), 
END4_THESQ  (B1L9C6    ), END4_THET2  (Q72KH8    ), END4_THEVO  (Q97A09    ), 
END4_TOLAT  (C4LD49    ), END4_UREPA  (Q9PQI5    ), END4_UREU1  (B5ZBB4    ), 
END4_VIBC3  (A5F5R6    ), END4_VIBCB  (A7MS84    ), END4_VIBCH  (Q9KPK7    ), 
END4_VIBCM  (C3LQD2    ), END4_VIBPA  (Q87SC6    ), END4_VIBVU  (Q8DEP6    ), 
END4_VIBVY  (Q7MNR1    ), END4_WOLSU  (Q7M8B4    ), END4_YERE8  (A1JLX8    ), 
END4_YERP3  (A7FK62    ), END4_YERPA  (Q1C982    ), END4_YERPB  (B2K9J1    ), 
END4_YERPE  (Q8ZGJ1    ), END4_YERPG  (A9R4S1    ), END4_YERPN  (Q1CG79    ), 
END4_YERPP  (A4TNA4    ), END4_YERPS  (Q66CR5    ), END4_YERPY  (B1JRM5    )
» more

UniProtKB/Swiss-Prot
False negative sequences
18 sequences

END4_AKKM8  (B2UQE3    ), END4_BACSK  (Q5WHC2    ), END4_BIFLS  (B7GRN1    ), 
END4_CAMC5  (A7GW36    ), END4_CAMHC  (A7I010    ), END4_CHLPB  (B3ELV8    ), 
END4_CLOBA  (B2V158    ), END4_CLOBB  (B2TL64    ), END4_DESPS  (Q6ASE4    ), 
END4_MESFL  (Q6F1D3    ), END4_METLZ  (A2SPZ6    ), END4_METMJ  (A3CT71    ), 
END4_MIMIV  (Q5UPY4    ), END4_MYCCT  (Q2ST57    ), END4_MYCMO  (Q6KH96    ), 
END4_MYCMS  (Q6MUC7    ), END4_MYCS5  (Q4A6S5    ), END4_NATTJ  (B2A499    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

END4_YEREN  (P42691    )

		
PDB
[Detailed view]
11 PDB

1QTW; 1QUM; 1XP3; 2NQ9; 2NQH; 2NQJ; 2X7V; 2X7W; 3AAL; 4HNO; 4K1G

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