Entry: PS00733

General information about the entry
Entry name RIBOSOMAL_S26E
Accession number PS00733
Entry type PATTERN
Date DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00601
Name and characterization of the entry
DescriptionRibosomal protein S26e signature.
Pattern [YH]-C-[VI]-[SA]-C-A-I-H.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 26 hits in 26 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 26 hits in 26 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 0
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 100.00 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RS261_ARATH (P49206), RS262_ARATH (Q8LPJ7), RS263_ARATH (Q9LYK9), 
RS26A_SCHPO (Q9UT56), RS26A_YEAST (P39938), RS26B_SCHPO (Q9UTG4), 
RS26B_YEAST (P39939), RS26L_HUMAN (Q5JNZ5), RS26_ANOGA  (Q9GT45), 
RS26_BOVIN  (Q56JV1), RS26_BRUPA  (P41959), RS26_CAEEL  (O45499), 
RS26_CRICR  (P30742), RS26_DICDI  (Q54TL8), RS26_DROME  (P13008), 
RS26_HUMAN  (P62854), RS26_MACFA  (P61251), RS26_MOUSE  (P62855), 
RS26_NEUCR  (P21772), RS26_OCTVU  (P27085), RS26_ORYSJ  (P49216), 
RS26_OXYNO  (Q9BHU1), RS26_PIG    (P49171), RS26_RAT    (P62856), 
RS26_SCHCO  (O93931), RS26_SHEEP  (Q6Q312)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
RS26_NEOVI  (P41692)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 3U5C; 3U5G;

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