Entry: PS00762

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General information about the entry

Entry name [info] WHEP_TRS_1
Accession [info] PS00762
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); APR-2006 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00614

Name and characterization of the entry

Description [info] WHEP-TRS domain signature.
Pattern [info]
[QYR]-[GH]-[DNEAR]-x-[LIV]-[KR]-x(2)-K-x(2)-[KRNG]-[AS]-x(4)-[LIV]-
[DENKA]-x(2)-[IV]-x(2)-L-x(3)-K.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 33 in 25 different sequences
Number of true positive hits 33 in 25 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.29 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 6
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
25 sequences

SYEP_DROME  (P28668), SYEP_HUMAN  (P07814), SYEP_MOUSE  (Q8CGC7), 
SYGM1_ARATH (O23627), SYG_BOMMO   (Q04451), SYG_CAEEL   (Q10039), 
SYG_HUMAN   (P41250), SYG_MOUSE   (Q9CZD3), SYG_PONAB   (Q5RBL1), 
SYHC_BOVIN  (Q2KI84), SYHC_HUMAN  (P12081), SYHC_MESAU  (P07178), 
SYHC_MOUSE  (Q61035), SYHC_PONAB  (Q5R4R2), SYH_SCHPO   (O43011), 
SYMC_BOVIN  (Q2T9L8), SYMC_HUMAN  (P56192), SYMC_MOUSE  (Q68FL6), 
SYMC_XENLA  (Q6PF21), SYWC_BOVIN  (P17248), SYWC_HUMAN  (P23381), 
SYWC_MOUSE  (P32921), SYWC_PONAB  (Q5R4J1), SYWC_RABIT  (P23612), 
SYWC_RAT    (Q6P7B0)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

SYNC1_ARATH (Q9SW96), SYNC3_ARATH (Q9SSK1)

		
UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

SYEP_CRIGR  (Q7SIA2), SYG_RAT     (Q5I0G4)

		
PDB
[Detailed view]
5 PDB

1FYJ; 1R6T; 1X59; 2DJV; 2LW7

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