Entry: PS00762

General information about the entry

Entry name [info] WHEP_TRS_1
Accession [info] PS00762
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED; 01-APR-2006 DATA UPDATE; 12-APR-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00614

Name and characterization of the entry

Description [info] WHEP-TRS domain signature.
Pattern [info]
[QYR]-[GH]-[DNEAR]-x-[LIV]-[KR]-x(2)-K-x(2)-[KRNG]-[AS]-x(4)-[LIV]-
[DENKA]-x(2)-[IV]-x(2)-L-x(3)-K.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_04 which contains 554'241 sequence entries.


Total number of hits 33 in 25 different sequences
Number of true positive hits 33 in 25 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.29 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 6
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
25 sequences

GARS_CAEEL  (Q10039    ), GARS_HUMAN  (P41250    ), GARS_MOUSE  (Q9CZD3    ), 
GARS_PONAB  (Q5RBL1    ), SYEP_DROME  (P28668    ), SYEP_HUMAN  (P07814    ), 
SYEP_MOUSE  (Q8CGC7    ), SYGM1_ARATH (O23627    ), SYG_BOMMO   (Q04451    ), 
SYHC_BOVIN  (Q2KI84    ), SYHC_HUMAN  (P12081    ), SYHC_MESAU  (P07178    ), 
SYHC_MOUSE  (Q61035    ), SYHC_PONAB  (Q5R4R2    ), SYH_SCHPO   (O43011    ), 
SYMC_BOVIN  (Q2T9L8    ), SYMC_HUMAN  (P56192    ), SYMC_MOUSE  (Q68FL6    ), 
SYMC_XENLA  (Q6PF21    ), SYWC_BOVIN  (P17248    ), SYWC_HUMAN  (P23381    ), 
SYWC_MOUSE  (P32921    ), SYWC_PONAB  (Q5R4J1    ), SYWC_RABIT  (P23612    ), 
SYWC_RAT    (Q6P7B0    )
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

SYNC1_ARATH (Q9SW96    ), SYNC3_ARATH (Q9SSK1    )

		
UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

GARS_RAT    (Q5I0G4    ), SYEP_CRIGR  (Q7SIA2    )

		
PDB
[Detailed view]
5 PDB

1FYJ; 1R6T; 1X59; 2DJV; 2LW7

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