Entry: PS00762

General information about the entry

Entry name [info] WHEP_TRS_1
Accession [info] PS00762
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); APR-2006 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00614

Name and characterization of the entry

Description [info] WHEP-TRS domain signature.
Pattern [info]
[QYR]-[GH]-[DNEAR]-x-[LIV]-[KR]-x(2)-K-x(2)-[KRNG]-[AS]-x(4)-[LIV]-
[DENKA]-x(2)-[IV]-x(2)-L-x(3)-K.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 33 in 25 different sequences
Number of true positive hits 33 in 25 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.29 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 6
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
25 sequences

SYEP_DROME  (P28668), SYEP_HUMAN  (P07814), SYEP_MOUSE  (Q8CGC7), 
SYGM1_ARATH (O23627), SYG_BOMMO   (Q04451), SYG_CAEEL   (Q10039), 
SYG_HUMAN   (P41250), SYG_MOUSE   (Q9CZD3), SYG_PONAB   (Q5RBL1), 
SYHC_BOVIN  (Q2KI84), SYHC_HUMAN  (P12081), SYHC_MESAU  (P07178), 
SYHC_MOUSE  (Q61035), SYHC_PONAB  (Q5R4R2), SYH_SCHPO   (O43011), 
SYMC_BOVIN  (Q2T9L8), SYMC_HUMAN  (P56192), SYMC_MOUSE  (Q68FL6), 
SYMC_XENLA  (Q6PF21), SYWC_BOVIN  (P17248), SYWC_HUMAN  (P23381), 
SYWC_MOUSE  (P32921), SYWC_PONAB  (Q5R4J1), SYWC_RABIT  (P23612), 
SYWC_RAT    (Q6P7B0)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

SYNC1_ARATH (Q9SW96), SYNC3_ARATH (Q9SSK1)

		
UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

SYEP_CRIGR  (Q7SIA2), SYG_RAT     (Q5I0G4)

		
PDB
[Detailed view]
5 PDB

1FYJ; 1R6T; 1X59; 2DJV; 2LW7

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