Entry: PS00813

General information about the entry

Entry name [info] IF4E
Accession [info] PS00813
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00641

Name and characterization of the entry

Description [info] Eukaryotic initiation factor 4E signature.
Pattern [info]
[DE]-[IFYL]-x(2)-F-[KRL]-x(2)-[LIVM]-x-P-x-W-E-[DVA]-x(5)-G-G-[KR]-W.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 38 in 38 different sequences
Number of true positive hits 38 in 38 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 7
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 84.44 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
38 sequences

I4E1B_HUMAN (A6NMX2    ), I4E1B_MOUSE (Q3UTA9    ), IF4E1_ARATH (O23252    ), 
IF4E1_CAEEL (O45551    ), IF4E1_MAIZE (O81481    ), IF4E1_ORYSJ (P48599    ), 
IF4E1_SCHPO (P78954    ), IF4E1_WHEAT (P29557    ), IF4E2_ARATH (Q9C7P2    ), 
IF4E2_CAEEL (Q21693    ), IF4E2_HUMAN (O60573    ), IF4E2_MAIZE (O81482    ), 
IF4E2_MOUSE (Q8BMB3    ), IF4E2_ORYSJ (P48600    ), IF4E2_SCHPO (O74743    ), 
IF4E2_WHEAT (Q03389    ), IF4E3_ARATH (Q9C7P6    ), IF4E3_CAEEL (O61955    ), 
IF4E3_ORYSJ (Q10NQ9    ), IF4E3_WHEAT (A3RCV9    ), IF4E4_ARATH (O04663    ), 
IF4E4_CAEEL (Q22888    ), IF4E5_ARATH (Q9FK59    ), IF4E5_CAEEL (P56570    ), 
IF4EA_DANRE (Q9DFS6    ), IF4EB_DANRE (Q9PW28    ), IF4E_APLCA  (O77210    ), 
IF4E_ASHGO  (Q75AV8    ), IF4E_BOVIN  (Q9N0T5    ), IF4E_CANAL  (Q9P975    ), 
IF4E_CANGA  (Q9P974    ), IF4E_DROME  (P48598    ), IF4E_HUMAN  (P06730    ), 
IF4E_MOUSE  (P63073    ), IF4E_RABIT  (P29338    ), IF4E_RAT    (P63074    ), 
IF4E_XENLA  (P48597    ), IF4E_YEAST  (P07260    )
» more

UniProtKB/Swiss-Prot
False negative sequences
7 sequences

I4E3A_XENLA (Q6GR08    ), I4E3B_XENLA (Q6NU27    ), IF4E3_DANRE (Q66HY7    ), 
IF4E3_HUMAN (Q8N5X7    ), IF4E3_MOUSE (Q9DBB5    ), IF4E3_XENTR (Q28ET8    ), 
IF4E_DICDI  (Q55FE0    )
» more

PDB
[Detailed view]
41 PDB

1AP8; 1EJ1; 1EJ4; 1EJH; 1IPB; 1IPC; 1L8B; 1RF8; 1WKW; 2GPQ; 2IDR; 2IDV; 2JGB; 2JGC; 2V8W; 2V8X; 2V8Y; 2W97; 3AM7; 3TF2; 3U7X; 4AXG; 4AZA; 4BEA; 4DT6; 4DUM; 4TPW; 4TQB; 4TQC; 4UE8; 4UE9; 4UEA; 4UEB; 4UEC; 4UED; 5ABI; 5ABU; 5ABV; 5ABX; 5ABY; 5BXV
» more

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