Entry: PS00820

General information about the entry

Entry name [info] GLUCOAMYLASE
Accession [info] PS00820
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); NOV-1995 (DATA UPDATE); MAR-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00646
Associated ProRule [info] PRU10051

Name and characterization of the entry

Description [info] Glucoamylase active site region signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_04 which contains 550'960 sequence entries.

Total number of hits 18 in 18 different sequences
Number of true positive hits 16 in 16 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 88.89 %
Recall (true positives / (true positives + false negatives)) 94.12 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 4
Site [info] active_site at position 7
Site [info] active_site at position 8
Version [info] 1

Cross-references [info]

True positive sequences
16 sequences

AMYG_ASPAW  (P69327), AMYG_ASPKA  (P23176), AMYG_ASPNG  (P69328), 
AMYG_ASPOR  (P36914), AMYG_ASPSH  (P22832), AMYG_BLAAD  (P42042), 
AMYG_CLOS0  (P29761), AMYG_NEUCR  (P14804), AMYG_RHIOR  (P07683), 
AMYG_SACFI  (P08017), AMYG_SCHCM  (D8Q9M3), AMYG_YEAST  (P08019), 
AMYH_SACFI  (P26989), AMYH_YEASX  (P04065), AMYI_YEASX  (P29760), 
Y1610_METJA (Q59005)
» more

False negative sequences
1 sequence

AMYG_AMORE  (Q03045)

False positive sequences
2 sequences

CAS2_SOLTU  (Q9FS29), VPR_HV2D2   (P15837)

[Detailed view]
10 PDB

1AGM; 1AYX; 1DOG; 1GAH; 1GAI; 1GLM; 2F6D; 2FBA; 3EQA; 3GLY

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