Entry: PS00820

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General information about the entry

Entry name [info] GLUCOAMYLASE
Accession [info] PS00820
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); NOV-1995 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00646
Associated ProRule [info] PRU10051

Name and characterization of the entry

Description [info] Glucoamylase active site region signature.
Pattern [info]
[STN]-[GP]-x(1,2)-[DE]-x-W-E-E-x(2)-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 17 in 17 different sequences
Number of true positive hits 15 in 15 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 88.24 %
Recall (true positives / (true positives + false negatives)) 93.75 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 4
Site [info] active_site at position 7
Site [info] active_site at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
15 sequences

AMYG_ASPAW  (P69327), AMYG_ASPKA  (P23176), AMYG_ASPNG  (P69328), 
AMYG_ASPOR  (P36914), AMYG_ASPSH  (P22832), AMYG_BLAAD  (P42042), 
AMYG_CLOS0  (P29761), AMYG_NEUCR  (P14804), AMYG_RHIOR  (P07683), 
AMYG_SACFI  (P08017), AMYG_YEAST  (P08019), AMYH_SACFI  (P26989), 
AMYH_YEASX  (P04065), AMYI_YEASX  (P29760), Y1610_METJA (Q59005)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

AMYG_AMORE  (Q03045)

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

CAS2_SOLTU  (Q9FS29), VPR_HV2D2   (P15837)

		
PDB
[Detailed view]
10 PDB

1AGM; 1AYX; 1DOG; 1GAH; 1GAI; 1GLM; 2F6D; 2FBA; 3EQA; 3GLY

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