| General information about the entry |
| Entry name | CYTO_HEME_LYASE_1 |
| Accession number | PS00821 |
| Entry type | PATTERN |
| Date | OCT-1993 (CREATED); DEC-2004 (DATA UPDATE); DEC-2011 (INFO UPDATE).
|
| PROSITE Documentation | PDOC00647 |
| Name and characterization of the entry |
| Description | Cytochrome c and c1 heme lyases signature 1.
|
| Pattern | H-N-x(2)-N-E-x(2)-W-[NQKRS]-x(4)-W-E.
|
| Numerical results |
- UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
- Total number of hits in UniProtKB/Swiss-Prot: 11 hits in 11 different sequences
- Number of hits on proteins that are known to belong to the set under consideration: 11 hits in 11 different sequences
- Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
- Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
- Number of known missed hits: 1
- Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
- Precision (true hits / (true hits + false positives)): 100.00 %
- Recall (true hits / (true hits + false negatives)): 91.67 %
|
| Comments |
|---|
- Taxonomic range: Eukaryotes
- Maximum known number of repetitions of the pattern in a single protein: 1
- VERSION: 1
|
| Cross-references |
| UniProtKB/Swiss-Prot | True positive hits:CCHL_BOVIN (A5PJG7), CCHL_CAEEL (P53703), CCHL_CANAW (P53700),
CCHL_CHICK (Q5F339), CCHL_HUMAN (P53701), CCHL_MOUSE (P53702),
CCHL_NEUCR (P14187), CCHL_SCHPO (O74794), CCHL_YEAST (P06182),
CYT2_YEAST (Q00873), YE42_SCHPO (O13962) False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):CCHL_DICDI (Q552W5) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
Retrieve the sequence logo from the alignment
|
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