Entry: PS00923

General information about the entry

Entry name [info] ASP_GLU_RACEMASE_1
Accession [info] PS00923
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); NOV-1997 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00714

Name and characterization of the entry

Description [info] Aspartate and glutamate racemases signature 1.
Pattern [info]
[IVA]-[LIVM]-x-C-x(0,1)-N-[ST]-[MSA]-[STH]-[LIVFYSTANK].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 298 in 298 different sequences
Number of true positive hits 279 in 279 different sequences
Number of 'unknown' hits 0
Number of false positive hits 19 in 19 different sequences
Number of false negative sequences 66
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 93.62 %
Recall (true positives / (true positives + false negatives)) 80.87 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
279 sequences

MURI1_BACSU (P94556), MURI2_BACSU (O05412), MURI_ACIC1  (A0LVJ8), 
MURI_ACTP2  (A3N3D7), MURI_ACTP7  (B3GZ94), MURI_ACTPJ  (B0BT16), 
MURI_ALISL  (B6ENT1), MURI_ANAVT  (Q3MD46), MURI_AQUAE  (O66662), 
MURI_AQUPY  (P56868), MURI_ARCB4  (A8ERI7), MURI_BACA2  (A7Z7C8), 
MURI_BACC1  (O31332), MURI_BACC2  (B7IIZ3), MURI_BACC3  (C1ETT1), 
MURI_BACC4  (B7HEB5), MURI_BACCZ  (Q633V2), MURI_BACP2  (A8FFY8), 
MURI_BACSK  (Q5WEL9), MURI_BARBK  (A1UT12), MURI_BEUC1  (C5BY82), 
MURI_BIFA0  (B8DT03), MURI_BIFAA  (A1A2L6), MURI_BIFLD  (B3DQ51), 
MURI_BIFLO  (Q8G7Z8), MURI_BIFLS  (B7GPZ1), MURI_BRUA1  (B2S641), 
MURI_BRUA2  (Q2YRV4), MURI_BRUAB  (Q57CU6), MURI_BRUC2  (A9M5L1), 
MURI_BRUMB  (C0RJG2), MURI_BRUME  (P63631), MURI_BRUO2  (A5VQW7), 
MURI_BRUSI  (B0CGZ3), MURI_BRUSU  (P63632), MURI_BUCAP  (Q8K924), 
MURI_CAMC1  (A7ZDH6), MURI_CAMC5  (A7GYL9), MURI_CAMFF  (A0RNJ6), 
MURI_CAMJE  (Q9PM24), MURI_CARST  (Q9L4V5), MURI_CAUSK  (B0T549), 
MURI_CLOAB  (Q97E66), MURI_CLOB1  (A7FZC4), MURI_CLOB6  (C3KWB8), 
MURI_CLOBA  (B2UX89), MURI_CLOBB  (B2THT3), MURI_CLOBH  (A5I7T7), 
MURI_CLOBJ  (C1FNG8), MURI_CLOBK  (B1IH18), MURI_CLOBL  (A7GJF6), 
MURI_CLOBM  (B1KTG4), MURI_CLOK1  (B9DY32), MURI_CLOK5  (A5N4H0), 
MURI_CLONN  (A0Q3B8), MURI_CLOP1  (Q0TM83), MURI_CLOPE  (Q8XHB7), 
MURI_CLOPS  (Q0SPY8), MURI_CORDI  (Q6NFN4), MURI_COREF  (Q8FMU6), 
MURI_CORGL  (Q9XDZ7), MURI_CYAP7  (B7KCC4), MURI_CYAP8  (B7JWN0), 
MURI_DEIRA  (Q9RU10), MURI_DINSH  (A8LMF7), MURI_ECO24  (A7ZUI7), 
MURI_ECO45  (B7MIA7), MURI_ECO55  (B7LA65), MURI_ECO57  (P63633), 
MURI_ECO7I  (B7NU33), MURI_ECO81  (B7MR95), MURI_ECO8A  (B7M723), 
MURI_ECOBW  (C5A0R6), MURI_ECODH  (B1XBX8), MURI_ECOHS  (A8A775), 
MURI_ECOL6  (Q8FB89), MURI_ECOLI  (P22634), MURI_ECOSE  (B6I5I5), 
MURI_ECOUT  (Q1R3U0), MURI_ENTFA  (Q836J0), MURI_ERWT9  (B2VGA6), 
MURI_ESCF3  (B7LUM6), MURI_EUBE2  (C4Z114), MURI_EXIS2  (B1YJW7), 
MURI_FRASN  (A8L764), MURI_FUSNN  (Q8REE6), MURI_GEOKA  (Q5KWI3), 
MURI_GEOMG  (Q39Y84), MURI_GEOSW  (C5D5M9), MURI_GRABC  (Q0BTT2), 
MURI_HAEDU  (Q7VKJ3), MURI_HAEI8  (Q4QJK7), MURI_HAEIE  (A5UBE2), 
MURI_HAEIG  (A5UFH0), MURI_HAEIN  (P52973), MURI_HAEPS  (B8F7R8), 
MURI_HAES1  (Q0I5M2), MURI_HALOH  (B8D151), MURI_HELAH  (Q17XG8), 
MURI_HELP2  (B6JLD2), MURI_HELPG  (B5Z6S2), MURI_HELPH  (Q1CTX8), 
MURI_HELPJ  (Q9ZLT0), MURI_HELPS  (B2UTT1), MURI_HELPY  (P56068), 
MURI_HERA2  (A9AXC6), MURI_HISS2  (B0URZ3), MURI_JANSC  (Q28PV7), 
MURI_KLEP3  (B5XZ09), MURI_KORVE  (Q1INP0), MURI_LACAC  (Q5FLV8), 
MURI_LACBA  (Q03R52), MURI_LACBR  (P48797), MURI_LACF3  (B2GB35), 
MURI_LACFE  (Q03469), MURI_LACLA  (Q9CG28), MURI_LACLM  (A2RKH0), 
MURI_LACLS  (Q02YQ3), MURI_LACPL  (Q88V19), MURI_LACRD  (A5VIY5), 
MURI_LACRJ  (B2G6G1), MURI_LACSS  (Q38YM1), MURI_LEIXX  (Q6AEK8), 
MURI_LISIN  (Q92CH2), MURI_LISMC  (C1L2E2), MURI_LISMF  (Q720J2), 
MURI_LISMH  (B8DHZ5), MURI_LISMO  (Q8Y7N7), MURI_LISW6  (A0AHX8), 
MURI_LYSSC  (B1HW77), MURI_LYSSH  (P52972), MURI_MARMS  (A6VX99), 
MURI_METCA  (Q609F9), MURI_MICAN  (B0JGW5), MURI_MYCA1  (A0QD02), 
MURI_MYCBO  (P63636), MURI_MYCBP  (A1KIC8), MURI_MYCBT  (C1AMY3), 
MURI_MYCLB  (B8ZR57), MURI_MYCLE  (P46705), MURI_MYCMM  (B2HQH3), 
MURI_MYCPA  (Q73X85), MURI_MYCS2  (A0R1X0), MURI_MYCTA  (A5U238), 
MURI_MYCTO  (P9WPW8), MURI_MYCTU  (P9WPW9), MURI_MYCUA  (A0PUH6), 
MURI_NOSS1  (Q9L870), MURI_OCEIH  (Q8EPJ4), MURI_OCHA4  (A6X0F8), 
MURI_OENOB  (Q04G05), MURI_PARDP  (A1B945), MURI_PASMU  (P57887), 
MURI_PECAS  (Q6CZB6), MURI_PECCP  (C6DHQ3), MURI_PEDPA  (Q03ES4), 
MURI_PEDPE  (Q08783), MURI_PERMH  (C0QQ35), MURI_PHOLL  (Q7MYE4), 
MURI_PROMH  (B4F1H6), MURI_PSEA7  (A6VC58), MURI_PSEA8  (B7V0K8), 
MURI_PSEAB  (Q02G12), MURI_PSEAE  (Q9HVD0), MURI_PSEE4  (Q1IEW8), 
MURI_PSEMY  (A4XR64), MURI_PSEP1  (A5VYG8), MURI_PSEPG  (B0KNE7), 
MURI_PSEPK  (Q88PW2), MURI_PSEPW  (B1JEP3), MURI_PSESM  (Q888B8), 
MURI_PSEU5  (A4VPB6), MURI_RALPJ  (B2U6V5), MURI_RALSO  (Q8XY07), 
MURI_RHILO  (Q98NP9), MURI_RHOS1  (A3PK37), MURI_RHOS4  (Q3J276), 
MURI_RHOS5  (A4WQY6), MURI_ROSDO  (Q163W3), MURI_ROSS1  (A5UTG1), 
MURI_RUEPO  (Q5LS93), MURI_RUEST  (Q1GHL1), MURI_SACEN  (A4F910), 
MURI_SALCH  (Q57H86), MURI_SALEP  (B5QXR2), MURI_SALG2  (B5REZ1), 
MURI_SALPA  (Q5PK79), MURI_SALPK  (B5BJP1), MURI_SALTI  (Q8Z315), 
MURI_SALTY  (P40723), MURI_SERP5  (A8GL72), MURI_SHEB2  (B8EBM4), 
MURI_SHEB5  (A3DA79), MURI_SHEB8  (A6WHQ9), MURI_SHEB9  (A9KW83), 
MURI_SHEDO  (Q12SP7), MURI_SHEFN  (Q089S6), MURI_SHEHH  (B0TMV5), 
MURI_SHELP  (A3Q963), MURI_SHEON  (Q8EK90), MURI_SHEPA  (A8GYV7), 
MURI_SHEPW  (B8CH57), MURI_SHESA  (A0KRK5), MURI_SHESM  (Q0HNV7), 
MURI_SHESR  (Q0I0C5), MURI_SHEWM  (B1KN02), MURI_SHIF8  (Q0SY24), 
MURI_SHIFL  (P63634), MURI_SODGM  (Q2NQZ7), MURI_SPHAL  (Q1GTU9), 
MURI_STAA1  (A7X179), MURI_STAA2  (A6U0W7), MURI_STAA3  (Q2FHT1), 
MURI_STAA8  (Q2FZC6), MURI_STAA9  (A5IS36), MURI_STAAB  (Q2YXC5), 
MURI_STAAC  (Q5HGT3), MURI_STAAE  (A6QG53), MURI_STAAM  (P63637), 
MURI_STAAN  (P63638), MURI_STAAR  (Q6GHT5), MURI_STAAS  (Q6GA64), 
MURI_STAAT  (A8Z1T2), MURI_STAAW  (P63639), MURI_STACT  (B9DPT7), 
MURI_STAEQ  (Q5HQ24), MURI_STAES  (Q8CPL0), MURI_STAHA  (P52974), 
MURI_STAHJ  (Q4L5F5), MURI_STAS1  (Q49WR7), MURI_STRA1  (Q3JZT5), 
MURI_STRA3  (Q8E3V7), MURI_STRA5  (Q8DY92), MURI_STRGC  (A8AYU3), 
MURI_STRP2  (Q04IS7), MURI_STRP4  (B5E1Z3), MURI_STRP7  (C1C9E7), 
MURI_STRPI  (B1I891), MURI_STRPJ  (B8ZNI5), MURI_STRPN  (P63640), 
MURI_STRPS  (B2ISX9), MURI_STRR6  (P63641), MURI_STRSV  (A3CPR2), 
MURI_STRT1  (Q5M1I5), MURI_STRT2  (Q5M627), MURI_STRTD  (Q03MG1), 
MURI_STRZJ  (C1CGA5), MURI_STRZP  (C1CMJ1), MURI_STRZT  (C1CTB1), 
MURI_SULNB  (A6QBL4), MURI_SULSY  (B2V9I5), MURI_SYMTH  (Q67SL6), 
MURI_SYNP2  (B1XPV8), MURI_SYNY3  (P73737), MURI_THET2  (Q72I52), 
MURI_THET8  (Q5SHT7), MURI_TREPA  (O83421), MURI_TREPS  (B2S303), 
MURI_VIBC3  (A5F4P4), MURI_VIBCB  (A7MXD3), MURI_VIBCH  (Q9KVI7), 
MURI_VIBCM  (C3LPZ8), MURI_VIBF1  (Q5E218), MURI_VIBFM  (B5FCA3), 
MURI_VIBPA  (Q87KP1), MURI_VIBVU  (Q8DD39), MURI_VIBVY  (Q7MQ40), 
MURI_WIGBR  (Q8D368), MURI_YERE8  (A1JI42), MURI_YERP3  (A7FD15), 
MURI_YERPB  (B2JZF9), MURI_YERPE  (Q8ZAA2), MURI_YERPS  (Q66G56), 
MURI_YERPY  (B1JQ44), RACD_ENTFC  (P29079), RACD_ENTFU  (H8L901), 
RACD_PYRHO  (O58403), RACX_BACSU  (P32960), YGEA_ECOLI  (P03813)
» More

UniProtKB/Swiss-Prot
False negative sequences
66 sequences

MAIA_ALCFA  (O24766), MAIA_GEOSE  (Q9WX57), MAIA_PSEPK  (Q88FY4), 
MURI1_CALS4 (Q8RD38), MURI2_CALS4 (Q8RC52), MURI3_CALS4 (Q8RAJ0), 
MURI_AGRFC  (Q8UE93), MURI_BARHE  (Q6G3D5), MURI_BARQU  (Q6FZU3), 
MURI_BART1  (A9IU96), MURI_BORBU  (O51127), MURI_BUCA5  (B8D9X6), 
MURI_BUCAI  (P57619), MURI_BUCAT  (B8D878), MURI_BUCBP  (P59574), 
MURI_CARHZ  (Q3AFA8), MURI_CHLP8  (B3QQD9), MURI_CHLPD  (A1BDJ6), 
MURI_CHLTE  (Q8KFN8), MURI_CORK4  (C4LJY7), MURI_CUPPJ  (Q46Z37), 
MURI_DESAP  (B1I4X2), MURI_GLOVI  (Q7NKI2), MURI_HYDS0  (B4UA20), 
MURI_LACH4  (A8YTR6), MURI_LACJO  (Q74KU5), MURI_LEPBJ  (Q04QQ5), 
MURI_LEPBL  (Q053X4), MURI_LEPIC  (Q72TI2), MURI_LEPIN  (Q8F1S7), 
MURI_NEIG1  (Q5F6P9), MURI_NEIMA  (P0A0Q9), MURI_NEIMB  (P0A0R0), 
MURI_NEIMC  (Q9RMM3), MURI_NEIMF  (A1KVG8), MURI_NITSB  (A6Q504), 
MURI_PHEZH  (B4RCD6), MURI_PROA2  (B4S417), MURI_PROM1  (A2C175), 
MURI_PROMT  (Q46LT2), MURI_RHIME  (Q92PG8), MURI_RHISN  (C3MD87), 
MURI_SINMW  (A6U9N0), MURI_STRE4  (C0M7R0), MURI_STRMU  (Q8DSQ5), 
MURI_STRP1  (Q9A1B7), MURI_STRP3  (P0CZ88), MURI_STRP6  (Q5XDP9), 
MURI_STRP8  (Q8P2D3), MURI_STRPB  (Q1JDD6), MURI_STRPC  (Q1JNA9), 
MURI_STRPD  (Q1JIG0), MURI_STRPF  (Q1J8B4), MURI_STRPG  (A2RG97), 
MURI_STRPM  (Q48V50), MURI_STRPQ  (P0CZ89), MURI_STRPZ  (B5XJX3), 
MURI_STRS2  (A4W3D7), MURI_STRS7  (C0MGG5), MURI_STRSY  (A4VX33), 
MURI_STRU0  (B9DTR9), MURI_SYNAS  (Q2LXZ9), MURI_SYNSC  (Q3AKJ1), 
MURI_THEP3  (B0KBP8), MURI_THEPX  (B0K3R0), MURI_TRIEI  (Q11A19)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

RACD_ANABR  (P83989), YPNL_PECCC  (P32968)

		
UniProtKB/Swiss-Prot
False positive sequences
19 sequences

COAT_CVB    (P37991), EMC1_YEAST  (P25574), G6PI_BAUCH  (Q1LU73), 
GT251_DANRE (A5PMF6), PGXC_ASPTN  (Q0CXI3), PP126_ARATH (Q9SGQ6), 
RFC3_ARATH  (Q8VXX4), RFC4_ORYSJ  (Q7XRX1), RFC5_ORYSJ  (Q852K3), 
SC6A5_HUMAN (Q9Y345), SC6A5_MOUSE (Q761V0), SC6A5_RAT   (P58295), 
SC6A5_XENLA (A7Y2X0), UBR4_HUMAN  (Q5T4S7), UBR4_MOUSE  (A2AN08), 
UBR4_RAT    (Q2TL32), WAKLH_ARATH (Q9C9L5), WAKLJ_ARATH (Q8VYA3), 
YAD4_SCHPO  (Q09830)
» More

PDB
[Detailed view]
20 PDB

1B73; 1B74; 1JFL; 1ZUW; 2JFN; 2JFO; 2JFP; 2JFQ; 2JFX; 2JFY; 2JFZ; 2VVT; 2W4I; 3HFR; 3IST; 3ISV; 3UHF; 3UHO; 3UHP; 4B1F
» More

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