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Entry: PS00923

General information about the entry

Entry name [info] ASP_GLU_RACEMASE_1
Accession [info] PS00923
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED; 01-NOV-1997 DATA UPDATE; 25-OCT-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00714

Name and characterization of the entry

Description [info] Aspartate and glutamate racemases signature 1.
Pattern [info]
[IVA]-[LIVM]-x-C-x(0,1)-N-[ST]-[MSA]-[STH]-[LIVFYSTANK].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_10 which contains 556'006 sequence entries.


Total number of hits 298 in 298 different sequences
Number of true positive hits 279 in 279 different sequences
Number of 'unknown' hits 0
Number of false positive hits 19 in 19 different sequences
Number of false negative sequences 66
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 93.62 %
Recall (true positives / (true positives + false negatives)) 80.87 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
279 sequences

MURI1_BACSU (P94556    ), MURI2_BACSU (O05412    ), MURI_ACIC1  (A0LVJ8    ), 
MURI_ACTP2  (A3N3D7    ), MURI_ACTP7  (B3GZ94    ), MURI_ACTPJ  (B0BT16    ), 
MURI_ALISL  (B6ENT1    ), MURI_ANAVT  (Q3MD46    ), MURI_AQUAE  (O66662    ), 
MURI_AQUPY  (P56868    ), MURI_ARCB4  (A8ERI7    ), MURI_BACC1  (O31332    ), 
MURI_BACC2  (B7IIZ3    ), MURI_BACC3  (C1ETT1    ), MURI_BACC4  (B7HEB5    ), 
MURI_BACCZ  (Q633V2    ), MURI_BACP2  (A8FFY8    ), MURI_BACSK  (Q5WEL9    ), 
MURI_BACVZ  (A7Z7C8    ), MURI_BARBK  (A1UT12    ), MURI_BEUC1  (C5BY82    ), 
MURI_BIFA0  (B8DT03    ), MURI_BIFAA  (A1A2L6    ), MURI_BIFLD  (B3DQ51    ), 
MURI_BIFLO  (Q8G7Z8    ), MURI_BIFLS  (B7GPZ1    ), MURI_BRUA1  (B2S641    ), 
MURI_BRUA2  (Q2YRV4    ), MURI_BRUAB  (Q57CU6    ), MURI_BRUC2  (A9M5L1    ), 
MURI_BRUMB  (C0RJG2    ), MURI_BRUME  (P63631    ), MURI_BRUO2  (A5VQW7    ), 
MURI_BRUSI  (B0CGZ3    ), MURI_BRUSU  (P63632    ), MURI_BUCAP  (Q8K924    ), 
MURI_CAMC1  (A7ZDH6    ), MURI_CAMC5  (A7GYL9    ), MURI_CAMFF  (A0RNJ6    ), 
MURI_CAMJE  (Q9PM24    ), MURI_CARST  (Q9L4V5    ), MURI_CAUSK  (B0T549    ), 
MURI_CLOAB  (Q97E66    ), MURI_CLOB1  (A7FZC4    ), MURI_CLOB6  (C3KWB8    ), 
MURI_CLOBA  (B2UX89    ), MURI_CLOBB  (B2THT3    ), MURI_CLOBH  (A5I7T7    ), 
MURI_CLOBJ  (C1FNG8    ), MURI_CLOBK  (B1IH18    ), MURI_CLOBL  (A7GJF6    ), 
MURI_CLOBM  (B1KTG4    ), MURI_CLOK1  (B9DY32    ), MURI_CLOK5  (A5N4H0    ), 
MURI_CLONN  (A0Q3B8    ), MURI_CLOP1  (Q0TM83    ), MURI_CLOPE  (Q8XHB7    ), 
MURI_CLOPS  (Q0SPY8    ), MURI_CORDI  (Q6NFN4    ), MURI_COREF  (Q8FMU6    ), 
MURI_CORGL  (Q9XDZ7    ), MURI_CYAP7  (B7KCC4    ), MURI_CYAP8  (B7JWN0    ), 
MURI_DEIRA  (Q9RU10    ), MURI_DINSH  (A8LMF7    ), MURI_ECO24  (A7ZUI7    ), 
MURI_ECO45  (B7MIA7    ), MURI_ECO55  (B7LA65    ), MURI_ECO57  (P63633    ), 
MURI_ECO7I  (B7NU33    ), MURI_ECO81  (B7MR95    ), MURI_ECO8A  (B7M723    ), 
MURI_ECOBW  (C5A0R6    ), MURI_ECODH  (B1XBX8    ), MURI_ECOHS  (A8A775    ), 
MURI_ECOL6  (Q8FB89    ), MURI_ECOLI  (P22634    ), MURI_ECOSE  (B6I5I5    ), 
MURI_ECOUT  (Q1R3U0    ), MURI_ENTFA  (Q836J0    ), MURI_ERWT9  (B2VGA6    ), 
MURI_ESCF3  (B7LUM6    ), MURI_EUBE2  (C4Z114    ), MURI_EXIS2  (B1YJW7    ), 
MURI_FRASN  (A8L764    ), MURI_FUSNN  (Q8REE6    ), MURI_GEOKA  (Q5KWI3    ), 
MURI_GEOMG  (Q39Y84    ), MURI_GEOSW  (C5D5M9    ), MURI_GRABC  (Q0BTT2    ), 
MURI_HAEDU  (Q7VKJ3    ), MURI_HAEI8  (Q4QJK7    ), MURI_HAEIE  (A5UBE2    ), 
MURI_HAEIG  (A5UFH0    ), MURI_HAEIN  (P52973    ), MURI_HAEPS  (B8F7R8    ), 
MURI_HAES1  (Q0I5M2    ), MURI_HALOH  (B8D151    ), MURI_HELAH  (Q17XG8    ), 
MURI_HELP2  (B6JLD2    ), MURI_HELPG  (B5Z6S2    ), MURI_HELPH  (Q1CTX8    ), 
MURI_HELPJ  (Q9ZLT0    ), MURI_HELPS  (B2UTT1    ), MURI_HELPY  (P56068    ), 
MURI_HERA2  (A9AXC6    ), MURI_HISS2  (B0URZ3    ), MURI_JANSC  (Q28PV7    ), 
MURI_KLEP3  (B5XZ09    ), MURI_KORVE  (Q1INP0    ), MURI_LACAC  (Q5FLV8    ), 
MURI_LACBA  (Q03R52    ), MURI_LACBR  (P48797    ), MURI_LACF3  (B2GB35    ), 
MURI_LACFE  (Q03469    ), MURI_LACLA  (Q9CG28    ), MURI_LACLM  (A2RKH0    ), 
MURI_LACLS  (Q02YQ3    ), MURI_LACPL  (Q88V19    ), MURI_LACRD  (A5VIY5    ), 
MURI_LACRJ  (B2G6G1    ), MURI_LACSS  (Q38YM1    ), MURI_LEIXX  (Q6AEK8    ), 
MURI_LISIN  (Q92CH2    ), MURI_LISMC  (C1L2E2    ), MURI_LISMF  (Q720J2    ), 
MURI_LISMH  (B8DHZ5    ), MURI_LISMO  (Q8Y7N7    ), MURI_LISW6  (A0AHX8    ), 
MURI_LYSSC  (B1HW77    ), MURI_LYSSH  (P52972    ), MURI_MARMS  (A6VX99    ), 
MURI_METCA  (Q609F9    ), MURI_MICAN  (B0JGW5    ), MURI_MYCA1  (A0QD02    ), 
MURI_MYCBO  (P63636    ), MURI_MYCBP  (A1KIC8    ), MURI_MYCBT  (C1AMY3    ), 
MURI_MYCLB  (B8ZR57    ), MURI_MYCLE  (P46705    ), MURI_MYCMM  (B2HQH3    ), 
MURI_MYCPA  (Q73X85    ), MURI_MYCS2  (A0R1X0    ), MURI_MYCTA  (A5U238    ), 
MURI_MYCTO  (P9WPW8    ), MURI_MYCTU  (P9WPW9    ), MURI_MYCUA  (A0PUH6    ), 
MURI_NOSS1  (Q9L870    ), MURI_OCEIH  (Q8EPJ4    ), MURI_OCHA4  (A6X0F8    ), 
MURI_OENOB  (Q04G05    ), MURI_PARDP  (A1B945    ), MURI_PASMU  (P57887    ), 
MURI_PECAS  (Q6CZB6    ), MURI_PECCP  (C6DHQ3    ), MURI_PEDPA  (Q03ES4    ), 
MURI_PEDPE  (Q08783    ), MURI_PERMH  (C0QQ35    ), MURI_PHOLL  (Q7MYE4    ), 
MURI_PROMH  (B4F1H6    ), MURI_PSEA7  (A6VC58    ), MURI_PSEA8  (B7V0K8    ), 
MURI_PSEAB  (Q02G12    ), MURI_PSEAE  (Q9HVD0    ), MURI_PSEE4  (Q1IEW8    ), 
MURI_PSEMY  (A4XR64    ), MURI_PSEP1  (A5VYG8    ), MURI_PSEPG  (B0KNE7    ), 
MURI_PSEPK  (Q88PW2    ), MURI_PSEPW  (B1JEP3    ), MURI_PSESM  (Q888B8    ), 
MURI_PSEU5  (A4VPB6    ), MURI_RALPJ  (B2U6V5    ), MURI_RALSO  (Q8XY07    ), 
MURI_RHILO  (Q98NP9    ), MURI_RHOS1  (A3PK37    ), MURI_RHOS4  (Q3J276    ), 
MURI_RHOS5  (A4WQY6    ), MURI_ROSDO  (Q163W3    ), MURI_ROSS1  (A5UTG1    ), 
MURI_RUEPO  (Q5LS93    ), MURI_RUEST  (Q1GHL1    ), MURI_SACEN  (A4F910    ), 
MURI_SALCH  (Q57H86    ), MURI_SALEP  (B5QXR2    ), MURI_SALG2  (B5REZ1    ), 
MURI_SALPA  (Q5PK79    ), MURI_SALPK  (B5BJP1    ), MURI_SALTI  (Q8Z315    ), 
MURI_SALTY  (P40723    ), MURI_SERP5  (A8GL72    ), MURI_SHEB2  (B8EBM4    ), 
MURI_SHEB5  (A3DA79    ), MURI_SHEB8  (A6WHQ9    ), MURI_SHEB9  (A9KW83    ), 
MURI_SHEDO  (Q12SP7    ), MURI_SHEFN  (Q089S6    ), MURI_SHEHH  (B0TMV5    ), 
MURI_SHELP  (A3Q963    ), MURI_SHEON  (Q8EK90    ), MURI_SHEPA  (A8GYV7    ), 
MURI_SHEPW  (B8CH57    ), MURI_SHESA  (A0KRK5    ), MURI_SHESM  (Q0HNV7    ), 
MURI_SHESR  (Q0I0C5    ), MURI_SHEWM  (B1KN02    ), MURI_SHIF8  (Q0SY24    ), 
MURI_SHIFL  (P63634    ), MURI_SODGM  (Q2NQZ7    ), MURI_SPHAL  (Q1GTU9    ), 
MURI_STAA1  (A7X179    ), MURI_STAA2  (A6U0W7    ), MURI_STAA3  (Q2FHT1    ), 
MURI_STAA8  (Q2FZC6    ), MURI_STAA9  (A5IS36    ), MURI_STAAB  (Q2YXC5    ), 
MURI_STAAC  (Q5HGT3    ), MURI_STAAE  (A6QG53    ), MURI_STAAM  (P63637    ), 
MURI_STAAN  (P63638    ), MURI_STAAR  (Q6GHT5    ), MURI_STAAS  (Q6GA64    ), 
MURI_STAAT  (A8Z1T2    ), MURI_STAAW  (P63639    ), MURI_STACT  (B9DPT7    ), 
MURI_STAEQ  (Q5HQ24    ), MURI_STAES  (Q8CPL0    ), MURI_STAHA  (P52974    ), 
MURI_STAHJ  (Q4L5F5    ), MURI_STAS1  (Q49WR7    ), MURI_STRA1  (Q3JZT5    ), 
MURI_STRA3  (Q8E3V7    ), MURI_STRA5  (Q8DY92    ), MURI_STRGC  (A8AYU3    ), 
MURI_STRP2  (Q04IS7    ), MURI_STRP4  (B5E1Z3    ), MURI_STRP7  (C1C9E7    ), 
MURI_STRPI  (B1I891    ), MURI_STRPJ  (B8ZNI5    ), MURI_STRPN  (P63640    ), 
MURI_STRPS  (B2ISX9    ), MURI_STRR6  (P63641    ), MURI_STRSV  (A3CPR2    ), 
MURI_STRT1  (Q5M1I5    ), MURI_STRT2  (Q5M627    ), MURI_STRTD  (Q03MG1    ), 
MURI_STRZJ  (C1CGA5    ), MURI_STRZP  (C1CMJ1    ), MURI_STRZT  (C1CTB1    ), 
MURI_SULNB  (A6QBL4    ), MURI_SULSY  (B2V9I5    ), MURI_SYMTH  (Q67SL6    ), 
MURI_SYNP2  (B1XPV8    ), MURI_SYNY3  (P73737    ), MURI_THET2  (Q72I52    ), 
MURI_THET8  (Q5SHT7    ), MURI_TREPA  (O83421    ), MURI_TREPS  (B2S303    ), 
MURI_VIBC3  (A5F4P4    ), MURI_VIBCB  (A7MXD3    ), MURI_VIBCH  (Q9KVI7    ), 
MURI_VIBCM  (C3LPZ8    ), MURI_VIBF1  (Q5E218    ), MURI_VIBFM  (B5FCA3    ), 
MURI_VIBPA  (Q87KP1    ), MURI_VIBVU  (Q8DD39    ), MURI_VIBVY  (Q7MQ40    ), 
MURI_WIGBR  (Q8D368    ), MURI_YERE8  (A1JI42    ), MURI_YERP3  (A7FD15    ), 
MURI_YERPB  (B2JZF9    ), MURI_YERPE  (Q8ZAA2    ), MURI_YERPS  (Q66G56    ), 
MURI_YERPY  (B1JQ44    ), RACD_ENTFC  (P29079    ), RACD_ENTFU  (H8L901    ), 
RACD_PYRHO  (O58403    ), RACX_BACSU  (P32960    ), YGEA_ECOLI  (P03813    )
» more

UniProtKB/Swiss-Prot
False negative sequences
66 sequences

MAIA_ALCFA  (O24766    ), MAIA_GEOSE  (Q9WX57    ), MAIA_PSEPK  (Q88FY4    ), 
MURI1_CALS4 (Q8RD38    ), MURI2_CALS4 (Q8RC52    ), MURI3_CALS4 (Q8RAJ0    ), 
MURI_AGRFC  (Q8UE93    ), MURI_BARHE  (Q6G3D5    ), MURI_BARQU  (Q6FZU3    ), 
MURI_BART1  (A9IU96    ), MURI_BORBU  (O51127    ), MURI_BUCA5  (B8D9X6    ), 
MURI_BUCAI  (P57619    ), MURI_BUCAT  (B8D878    ), MURI_BUCBP  (P59574    ), 
MURI_CARHZ  (Q3AFA8    ), MURI_CHLP8  (B3QQD9    ), MURI_CHLPD  (A1BDJ6    ), 
MURI_CHLTE  (Q8KFN8    ), MURI_CORK4  (C4LJY7    ), MURI_CUPNJ  (Q46Z37    ), 
MURI_DESAP  (B1I4X2    ), MURI_GLOVI  (Q7NKI2    ), MURI_HYDS0  (B4UA20    ), 
MURI_LACH4  (A8YTR6    ), MURI_LACJO  (Q74KU5    ), MURI_LEPBJ  (Q04QQ5    ), 
MURI_LEPBL  (Q053X4    ), MURI_LEPIC  (Q72TI2    ), MURI_LEPIN  (Q8F1S7    ), 
MURI_NEIG1  (Q5F6P9    ), MURI_NEIMA  (P0A0Q9    ), MURI_NEIMB  (P0A0R0    ), 
MURI_NEIMC  (Q9RMM3    ), MURI_NEIMF  (A1KVG8    ), MURI_NITSB  (A6Q504    ), 
MURI_PHEZH  (B4RCD6    ), MURI_PROA2  (B4S417    ), MURI_PROM1  (A2C175    ), 
MURI_PROMT  (Q46LT2    ), MURI_RHIME  (Q92PG8    ), MURI_SINFN  (C3MD87    ), 
MURI_SINMW  (A6U9N0    ), MURI_STRE4  (C0M7R0    ), MURI_STRMU  (Q8DSQ5    ), 
MURI_STRP1  (Q9A1B7    ), MURI_STRP3  (P0CZ88    ), MURI_STRP6  (Q5XDP9    ), 
MURI_STRP8  (Q8P2D3    ), MURI_STRPB  (Q1JDD6    ), MURI_STRPC  (Q1JNA9    ), 
MURI_STRPD  (Q1JIG0    ), MURI_STRPF  (Q1J8B4    ), MURI_STRPG  (A2RG97    ), 
MURI_STRPM  (Q48V50    ), MURI_STRPQ  (P0CZ89    ), MURI_STRPZ  (B5XJX3    ), 
MURI_STRS2  (A4W3D7    ), MURI_STRS7  (C0MGG5    ), MURI_STRSY  (A4VX33    ), 
MURI_STRU0  (B9DTR9    ), MURI_SYNAS  (Q2LXZ9    ), MURI_SYNSC  (Q3AKJ1    ), 
MURI_THEP3  (B0KBP8    ), MURI_THEPX  (B0K3R0    ), MURI_TRIEI  (Q11A19    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

RACD_ANABR  (P83989    ), YPNL_PECCC  (P32968    )

		
UniProtKB/Swiss-Prot
False positive sequences
19 sequences

COAT_CVB    (P37991    ), EMC1_YEAST  (P25574    ), G6PI_BAUCH  (Q1LU73    ), 
GT251_DANRE (A5PMF6    ), PGXC_ASPTN  (Q0CXI3    ), PP126_ARATH (Q9SGQ6    ), 
RFC3_ARATH  (Q8VXX4    ), RFC4_ORYSJ  (Q7XRX1    ), RFC5_ORYSJ  (Q852K3    ), 
SC6A5_HUMAN (Q9Y345    ), SC6A5_MOUSE (Q761V0    ), SC6A5_RAT   (P58295    ), 
SC6A5_XENLA (A7Y2X0    ), UBR4_HUMAN  (Q5T4S7    ), UBR4_MOUSE  (A2AN08    ), 
UBR4_RAT    (Q2TL32    ), WAKLH_ARATH (Q9C9L5    ), WAKLJ_ARATH (Q8VYA3    ), 
YAD4_SCHPO  (Q09830    )
» more

PDB
[Detailed view]
22 PDB

1B73; 1B74; 1JFL; 1ZUW; 2JFN; 2JFO; 2JFP; 2JFQ; 2JFX; 2JFY; 2JFZ; 2VVT; 2W4I; 3HFR; 3IST; 3ISV; 3UHF; 3UHO; 3UHP; 4B1F; 5HJ7; 5IJW
» more

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