Entry: PS00923

Forthcoming changes to the profile format
General information about the entry

Entry name [info] ASP_GLU_RACEMASE_1
Accession [info] PS00923
Entry type [info] PATTERN
Date [info] OCT-1993 (CREATED); NOV-1997 (DATA UPDATE); FEB-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00714

Name and characterization of the entry

Description [info] Aspartate and glutamate racemases signature 1.
Pattern [info]
[IVA]-[LIVM]-x-C-x(0,1)-N-[ST]-[MSA]-[STH]-[LIVFYSTANK].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_03 which contains 542'782 sequence entries.


Total number of hits 296 in 296 different sequences
Number of true positive hits 277 in 277 different sequences
Number of 'unknown' hits
Number of false positive hits 19 in 19 different sequences
Number of false negative sequences 66
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 93.58 %
Recall (true positives / (true positives + false negatives)) 80.76 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site(?) at position 4
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
277 sequences

MURI1_BACSU (P94556), MURI2_BACSU (O05412), MURI_ACIC1  (A0LVJ8), 
MURI_ACTP2  (A3N3D7), MURI_ACTP7  (B3GZ94), MURI_ACTPJ  (B0BT16), 
MURI_ALISL  (B6ENT1), MURI_ANAVT  (Q3MD46), MURI_AQUAE  (O66662), 
MURI_AQUPY  (P56868), MURI_ARCB4  (A8ERI7), MURI_BACA2  (A7Z7C8), 
MURI_BACC1  (O31332), MURI_BACC2  (B7IIZ3), MURI_BACC3  (C1ETT1), 
MURI_BACC4  (B7HEB5), MURI_BACCZ  (Q633V2), MURI_BACP2  (A8FFY8), 
MURI_BACSK  (Q5WEL9), MURI_BARBK  (A1UT12), MURI_BEUC1  (C5BY82), 
MURI_BIFA0  (B8DT03), MURI_BIFAA  (A1A2L6), MURI_BIFLD  (B3DQ51), 
MURI_BIFLO  (Q8G7Z8), MURI_BIFLS  (B7GPZ1), MURI_BRUA1  (B2S641), 
MURI_BRUA2  (Q2YRV4), MURI_BRUAB  (Q57CU6), MURI_BRUC2  (A9M5L1), 
MURI_BRUMB  (C0RJG2), MURI_BRUME  (P63631), MURI_BRUO2  (A5VQW7), 
MURI_BRUSI  (B0CGZ3), MURI_BRUSU  (P63632), MURI_BUCAP  (Q8K924), 
MURI_CAMC1  (A7ZDH6), MURI_CAMC5  (A7GYL9), MURI_CAMFF  (A0RNJ6), 
MURI_CAMJE  (Q9PM24), MURI_CARST  (Q9L4V5), MURI_CAUSK  (B0T549), 
MURI_CLOAB  (Q97E66), MURI_CLOB1  (A7FZC4), MURI_CLOB6  (C3KWB8), 
MURI_CLOBA  (B2UX89), MURI_CLOBB  (B2THT3), MURI_CLOBH  (A5I7T7), 
MURI_CLOBJ  (C1FNG8), MURI_CLOBK  (B1IH18), MURI_CLOBL  (A7GJF6), 
MURI_CLOBM  (B1KTG4), MURI_CLOK1  (B9DY32), MURI_CLOK5  (A5N4H0), 
MURI_CLONN  (A0Q3B8), MURI_CLOP1  (Q0TM83), MURI_CLOPE  (Q8XHB7), 
MURI_CLOPS  (Q0SPY8), MURI_CORDI  (Q6NFN4), MURI_COREF  (Q8FMU6), 
MURI_CORGL  (Q9XDZ7), MURI_CYAP7  (B7KCC4), MURI_CYAP8  (B7JWN0), 
MURI_DEIRA  (Q9RU10), MURI_DINSH  (A8LMF7), MURI_ECO24  (A7ZUI7), 
MURI_ECO45  (B7MIA7), MURI_ECO55  (B7LA65), MURI_ECO57  (P63633), 
MURI_ECO7I  (B7NU33), MURI_ECO81  (B7MR95), MURI_ECO8A  (B7M723), 
MURI_ECOBW  (C5A0R6), MURI_ECODH  (B1XBX8), MURI_ECOHS  (A8A775), 
MURI_ECOL6  (Q8FB89), MURI_ECOLI  (P22634), MURI_ECOSE  (B6I5I5), 
MURI_ECOUT  (Q1R3U0), MURI_ENTFA  (Q836J0), MURI_ERWCT  (Q6CZB6), 
MURI_ERWT9  (B2VGA6), MURI_ESCF3  (B7LUM6), MURI_EUBE2  (C4Z114), 
MURI_EXIS2  (B1YJW7), MURI_FRASN  (A8L764), MURI_FUSNN  (Q8REE6), 
MURI_GEOKA  (Q5KWI3), MURI_GEOMG  (Q39Y84), MURI_GEOSW  (C5D5M9), 
MURI_GRABC  (Q0BTT2), MURI_HAEDU  (Q7VKJ3), MURI_HAEI8  (Q4QJK7), 
MURI_HAEIE  (A5UBE2), MURI_HAEIG  (A5UFH0), MURI_HAEIN  (P52973), 
MURI_HAEPS  (B8F7R8), MURI_HALOH  (B8D151), MURI_HELAH  (Q17XG8), 
MURI_HELP2  (B6JLD2), MURI_HELPG  (B5Z6S2), MURI_HELPH  (Q1CTX8), 
MURI_HELPJ  (Q9ZLT0), MURI_HELPS  (B2UTT1), MURI_HELPY  (P56068), 
MURI_HERA2  (A9AXC6), MURI_HISS1  (Q0I5M2), MURI_HISS2  (B0URZ3), 
MURI_JANSC  (Q28PV7), MURI_KLEP3  (B5XZ09), MURI_KORVE  (Q1INP0), 
MURI_LACAC  (Q5FLV8), MURI_LACBA  (Q03R52), MURI_LACBR  (P48797), 
MURI_LACF3  (B2GB35), MURI_LACFE  (Q03469), MURI_LACLA  (Q9CG28), 
MURI_LACLM  (A2RKH0), MURI_LACLS  (Q02YQ3), MURI_LACPL  (Q88V19), 
MURI_LACRD  (A5VIY5), MURI_LACRJ  (B2G6G1), MURI_LACSS  (Q38YM1), 
MURI_LEIXX  (Q6AEK8), MURI_LISIN  (Q92CH2), MURI_LISMC  (C1L2E2), 
MURI_LISMF  (Q720J2), MURI_LISMH  (B8DHZ5), MURI_LISMO  (Q8Y7N7), 
MURI_LISW6  (A0AHX8), MURI_LYSSC  (B1HW77), MURI_LYSSH  (P52972), 
MURI_MARMS  (A6VX99), MURI_METCA  (Q609F9), MURI_MICAN  (B0JGW5), 
MURI_MYCA1  (A0QD02), MURI_MYCBO  (P63636), MURI_MYCBP  (A1KIC8), 
MURI_MYCBT  (C1AMY3), MURI_MYCLB  (B8ZR57), MURI_MYCLE  (P46705), 
MURI_MYCMM  (B2HQH3), MURI_MYCPA  (Q73X85), MURI_MYCS2  (A0R1X0), 
MURI_MYCTA  (A5U238), MURI_MYCTU  (P63635), MURI_MYCUA  (A0PUH6), 
MURI_NOSS1  (Q9L870), MURI_OCEIH  (Q8EPJ4), MURI_OCHA4  (A6X0F8), 
MURI_OENOB  (Q04G05), MURI_PARDP  (A1B945), MURI_PASMU  (P57887), 
MURI_PECCP  (C6DHQ3), MURI_PEDPA  (Q03ES4), MURI_PEDPE  (Q08783), 
MURI_PERMH  (C0QQ35), MURI_PHOLL  (Q7MYE4), MURI_PROMH  (B4F1H6), 
MURI_PSEA7  (A6VC58), MURI_PSEA8  (B7V0K8), MURI_PSEAB  (Q02G12), 
MURI_PSEAE  (Q9HVD0), MURI_PSEE4  (Q1IEW8), MURI_PSEMY  (A4XR64), 
MURI_PSEP1  (A5VYG8), MURI_PSEPG  (B0KNE7), MURI_PSEPK  (Q88PW2), 
MURI_PSEPW  (B1JEP3), MURI_PSESM  (Q888B8), MURI_PSEU5  (A4VPB6), 
MURI_RALPJ  (B2U6V5), MURI_RALSO  (Q8XY07), MURI_RHILO  (Q98NP9), 
MURI_RHOS1  (A3PK37), MURI_RHOS4  (Q3J276), MURI_RHOS5  (A4WQY6), 
MURI_ROSDO  (Q163W3), MURI_ROSS1  (A5UTG1), MURI_RUEPO  (Q5LS93), 
MURI_RUEST  (Q1GHL1), MURI_SACEN  (A4F910), MURI_SALCH  (Q57H86), 
MURI_SALEP  (B5QXR2), MURI_SALG2  (B5REZ1), MURI_SALPA  (Q5PK79), 
MURI_SALPK  (B5BJP1), MURI_SALTI  (Q8Z315), MURI_SALTY  (P40723), 
MURI_SERP5  (A8GL72), MURI_SHEB2  (B8EBM4), MURI_SHEB5  (A3DA79), 
MURI_SHEB8  (A6WHQ9), MURI_SHEB9  (A9KW83), MURI_SHEDO  (Q12SP7), 
MURI_SHEFN  (Q089S6), MURI_SHEHH  (B0TMV5), MURI_SHELP  (A3Q963), 
MURI_SHEON  (Q8EK90), MURI_SHEPA  (A8GYV7), MURI_SHEPW  (B8CH57), 
MURI_SHESA  (A0KRK5), MURI_SHESM  (Q0HNV7), MURI_SHESR  (Q0I0C5), 
MURI_SHEWM  (B1KN02), MURI_SHIF8  (Q0SY24), MURI_SHIFL  (P63634), 
MURI_SODGM  (Q2NQZ7), MURI_SPHAL  (Q1GTU9), MURI_STAA1  (A7X179), 
MURI_STAA2  (A6U0W7), MURI_STAA3  (Q2FHT1), MURI_STAA8  (Q2FZC6), 
MURI_STAA9  (A5IS36), MURI_STAAB  (Q2YXC5), MURI_STAAC  (Q5HGT3), 
MURI_STAAE  (A6QG53), MURI_STAAM  (P63637), MURI_STAAN  (P63638), 
MURI_STAAR  (Q6GHT5), MURI_STAAS  (Q6GA64), MURI_STAAT  (A8Z1T2), 
MURI_STAAW  (P63639), MURI_STACT  (B9DPT7), MURI_STAEQ  (Q5HQ24), 
MURI_STAES  (Q8CPL0), MURI_STAHA  (P52974), MURI_STAHJ  (Q4L5F5), 
MURI_STAS1  (Q49WR7), MURI_STRA1  (Q3JZT5), MURI_STRA3  (Q8E3V7), 
MURI_STRA5  (Q8DY92), MURI_STRGC  (A8AYU3), MURI_STRP2  (Q04IS7), 
MURI_STRP4  (B5E1Z3), MURI_STRP7  (C1C9E7), MURI_STRPI  (B1I891), 
MURI_STRPJ  (B8ZNI5), MURI_STRPN  (P63640), MURI_STRPS  (B2ISX9), 
MURI_STRR6  (P63641), MURI_STRSV  (A3CPR2), MURI_STRT1  (Q5M1I5), 
MURI_STRT2  (Q5M627), MURI_STRTD  (Q03MG1), MURI_STRZJ  (C1CGA5), 
MURI_STRZP  (C1CMJ1), MURI_STRZT  (C1CTB1), MURI_SULNB  (A6QBL4), 
MURI_SULSY  (B2V9I5), MURI_SYMTH  (Q67SL6), MURI_SYNP2  (B1XPV8), 
MURI_SYNY3  (P73737), MURI_THET2  (Q72I52), MURI_THET8  (Q5SHT7), 
MURI_TREPA  (O83421), MURI_TREPS  (B2S303), MURI_VIBC3  (A5F4P4), 
MURI_VIBCB  (A7MXD3), MURI_VIBCH  (Q9KVI7), MURI_VIBCM  (C3LPZ8), 
MURI_VIBF1  (Q5E218), MURI_VIBFM  (B5FCA3), MURI_VIBPA  (Q87KP1), 
MURI_VIBVU  (Q8DD39), MURI_VIBVY  (Q7MQ40), MURI_WIGBR  (Q8D368), 
MURI_YERE8  (A1JI42), MURI_YERP3  (A7FD15), MURI_YERPB  (B2JZF9), 
MURI_YERPE  (Q8ZAA2), MURI_YERPS  (Q66G56), MURI_YERPY  (B1JQ44), 
RACD_ENTFC  (P29079), RACD_ENTFU  (H8L901), RACX_BACSU  (P32960), 
YGEA_ECOLI  (P03813)
» More

UniProtKB/Swiss-Prot
False negative sequences
66 sequences

MAIA_ALCFA  (O24766), MAIA_GEOSE  (Q9WX57), MAIA_PSEPK  (Q88FY4), 
MURI1_THETN (Q8RD38), MURI2_THETN (Q8RC52), MURI3_THETN (Q8RAJ0), 
MURI_AGRT5  (Q8UE93), MURI_BARHE  (Q6G3D5), MURI_BARQU  (Q6FZU3), 
MURI_BART1  (A9IU96), MURI_BORBU  (O51127), MURI_BUCA5  (B8D9X6), 
MURI_BUCAI  (P57619), MURI_BUCAT  (B8D878), MURI_BUCBP  (P59574), 
MURI_CARHZ  (Q3AFA8), MURI_CHLP8  (B3QQD9), MURI_CHLPD  (A1BDJ6), 
MURI_CHLTE  (Q8KFN8), MURI_CORK4  (C4LJY7), MURI_CUPPJ  (Q46Z37), 
MURI_DESAP  (B1I4X2), MURI_GLOVI  (Q7NKI2), MURI_HYDS0  (B4UA20), 
MURI_LACH4  (A8YTR6), MURI_LACJO  (Q74KU5), MURI_LEPBJ  (Q04QQ5), 
MURI_LEPBL  (Q053X4), MURI_LEPIC  (Q72TI2), MURI_LEPIN  (Q8F1S7), 
MURI_NEIG1  (Q5F6P9), MURI_NEIMA  (P0A0Q9), MURI_NEIMB  (P0A0R0), 
MURI_NEIMC  (Q9RMM3), MURI_NEIMF  (A1KVG8), MURI_NITSB  (A6Q504), 
MURI_PHEZH  (B4RCD6), MURI_PROA2  (B4S417), MURI_PROM1  (A2C175), 
MURI_PROMT  (Q46LT2), MURI_RHIME  (Q92PG8), MURI_RHISN  (C3MD87), 
MURI_SINMW  (A6U9N0), MURI_STRE4  (C0M7R0), MURI_STRMU  (Q8DSQ5), 
MURI_STRP1  (Q9A1B7), MURI_STRP3  (P0CZ88), MURI_STRP6  (Q5XDP9), 
MURI_STRP8  (Q8P2D3), MURI_STRPB  (Q1JDD6), MURI_STRPC  (Q1JNA9), 
MURI_STRPD  (Q1JIG0), MURI_STRPF  (Q1J8B4), MURI_STRPG  (A2RG97), 
MURI_STRPM  (Q48V50), MURI_STRPQ  (P0CZ89), MURI_STRPZ  (B5XJX3), 
MURI_STRS2  (A4W3D7), MURI_STRS7  (C0MGG5), MURI_STRSY  (A4VX33), 
MURI_STRU0  (B9DTR9), MURI_SYNAS  (Q2LXZ9), MURI_SYNSC  (Q3AKJ1), 
MURI_THEP3  (B0KBP8), MURI_THEPX  (B0K3R0), MURI_TRIEI  (Q11A19)
» More

UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

RACD_ANABR  (P83989), YPNL_PECCC  (P32968)

		
UniProtKB/Swiss-Prot
False positive sequences
19 sequences

COAT_CVB    (P37991), EMC1_YEAST  (P25574), G6PI_BAUCH  (Q1LU73), 
GT251_DANRE (A5PMF6), PGXC_ASPTN  (Q0CXI3), PP126_ARATH (Q9SGQ6), 
RFC3_ARATH  (Q8VXX4), RFC4_ORYSJ  (Q7XRX1), RFC5_ORYSJ  (Q852K3), 
SC6A5_HUMAN (Q9Y345), SC6A5_MOUSE (Q761V0), SC6A5_RAT   (P58295), 
SC6A5_XENLA (A7Y2X0), UBR4_HUMAN  (Q5T4S7), UBR4_MOUSE  (A2AN08), 
UBR4_RAT    (Q2TL32), WAKLH_ARATH (Q9C9L5), WAKLJ_ARATH (Q8VYA3), 
YAD4_SCHPO  (Q09830)
» More

PDB
[Detailed view]
19 PDB

1B73; 1B74; 1ZUW; 2JFN; 2JFO; 2JFP; 2JFQ; 2JFX; 2JFY; 2JFZ; 2VVT; 2W4I; 3HFR; 3IST; 3ISV; 3UHF; 3UHO; 3UHP; 4B1F
» More

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