Entry: PS00939

General information about the entry

Entry name [info] RIBOSOMAL_L1E
Accession [info] PS00939
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); JUN-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00724

Name and characterization of the entry

Description [info] Ribosomal protein L1e signature.
Pattern [info]
[NP]-x(3)-[KRM]-x(2)-A-[LIVTK]-x-[SA]-[AC]-[LIV]-x-[ALCM]-[STL]-[SGAKTI]-
x(7)-[RK]-[GS]-H.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_08 which contains 320'201 sequence entries.


Total number of hits 66 in 66 different sequences
Number of true positive hits 66 in 66 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.06 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
66 sequences

RL4A_ARATH  (Q9SF40), RL4A_SCHPO  (P35679), RL4A_XENLA  (P08429), 
RL4A_YEAST  (P10664), RL4B_ARATH  (P49691), RL4B_SCHPO  (Q9P784), 
RL4B_XENLA  (P02385), RL4B_YEAST  (P49626), RL4_AERPE   (Q9YFM1), 
RL4_ARCFU   (O28355), RL4_BOVIN   (Q58DW0), RL4_CAEEL   (O02056), 
RL4_CANFA   (Q28346), RL4_DICDI   (Q54Z69), RL4_DROME   (P09180), 
RL4_ENTHI   (O15594), RL4_HALLT   (B9LSS6), RL4_HALMA   (P12735), 
RL4_HALS3   (B0R657), RL4_HALSA   (Q9HPD3), RL4_HUMAN   (P36578), 
RL4_MACFA   (Q4R5P9), RL4_META3   (A6UV67), RL4_METAC   (Q8TRU6), 
RL4_METBU   (Q12ZV0), RL4_METHJ   (Q2FU92), RL4_METJA   (P54015), 
RL4_METKA   (Q8TY91), RL4_METM5   (A4FVY1), RL4_METM6   (A9A9B7), 
RL4_METM7   (A6VHD3), RL4_METMA   (Q8PV49), RL4_METMJ   (A3CSZ8), 
RL4_METMP   (P60846), RL4_METS3   (A5UL88), RL4_METST   (Q2NFV7), 
RL4_METTH   (O26111), RL4_METTP   (A0B9W9), RL4_METVS   (A6UQJ1), 
RL4_MOUSE   (Q9D8E6), RL4_NANEQ   (P60847), RL4_NATPD   (Q3IMY7), 
RL4_PONAB   (Q5RCR3), RL4_PRUAR   (Q9XF97), RL4_PYRAB   (Q9V1T6), 
RL4_PYRAE   (Q8ZW51), RL4_PYRFU   (Q8TZZ9), RL4_PYRHO   (O59420), 
RL4_RAT     (P50878), RL4_SULIA   (C3N5S8), RL4_SULIK   (C4KHF7), 
RL4_SULIL   (C3MQ60), RL4_SULIM   (C3MVH9), RL4_SULIN   (C3NHA8), 
RL4_SULIY   (C3NEE4), RL4_SULSO   (Q9UXA6), RL4_SULTO   (Q975I2), 
RL4_TETTS   (P0DJ55), RL4_THEAC   (Q9HIR0), RL4_THEGJ   (C5A285), 
RL4_THEKO   (Q5JDI0), RL4_THEON   (B6YSL4), RL4_THESM   (C6A160), 
RL4_THEVO   (Q97BX6), RL4_TRYBB   (P49669), RL4_URECA   (P49165)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

RL4_HALWD   (Q18GF0), RL4_METB6   (A7I5P0)

		
UniProtKB/Swiss-Prot
'Partial' sequences
2 sequences

RL4_PIG     (Q29187), RL4_XENTR   (P14117)

		
PDB
[Detailed view]
70 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 2WW9; 2WWA; 2WWB; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3OW2; 4ADX
» More

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