Entry: PS00948

General information about the entry
Entry name RIBOSOMAL_S7E
Accession number PS00948
Entry type PATTERN
Date JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00730
Name and characterization of the entry
DescriptionRibosomal protein S7e signature.
Pattern [KRAI]-L-x-R-E-L-E-K-K-F-[SAPQG]-x-[KRN]-[HED].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 27 hits in 27 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 27 hits in 27 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 93.10 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RS71_ARATH  (Q9C514), RS72_ARATH  (Q9M885), RS73_ARATH  (Q8LD03), 
RS7A_YEAST  (P26786), RS7B_YEAST  (P48164), RS7_ANOGA   (P33514), 
RS7_AVIMR   (Q9ZNS1), RS7_BOVIN   (A6H769), RS7_BRAOL   (Q9XH45), 
RS7_CAEEL   (Q23312), RS7_CULQU   (Q9NB21), RS7_DANRE   (P62084), 
RS7_DROME   (Q9VA91), RS7_DROYA   (P62085), RS7_FELCA   (Q5RT64), 
RS7_HUMAN   (P62081), RS7_ICTPU   (Q90YR7), RS7_MANSE   (P48155), 
RS7_MOUSE   (P62082), RS7_NEUCR   (O43105), RS7_ORYSJ   (Q8LJU5), 
RS7_RAT     (P62083), RS7_SCHPO   (Q10101), RS7_SECCE   (Q9XET4), 
RS7_SPOFR   (Q962S0), RS7_TAKRU   (P50894), RS7_XENLA   (P02362)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
RS7_DICDI   (Q54I41), RS7_HORVU   (Q949H0)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
RS7_SALSA   (P47839)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 3U5C; 3U5G;

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