Entry: PS00961

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General information about the entry

Entry name [info] RIBOSOMAL_S28E
Accession [info] PS00961
Entry type [info] PATTERN
Date [info] JUN-1994 (CREATED); DEC-2004 (DATA UPDATE); MAR-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00743

Name and characterization of the entry

Description [info] Ribosomal protein S28e signature.
Pattern [info]
E-[ST]-[EA]-R-E-A-[RK]-x-[LI].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_04 which contains 544'996 sequence entries.


Total number of hits 53 in 53 different sequences
Number of true positive hits 51 in 51 different sequences
Number of 'unknown' hits
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.23 %
Recall (true positives / (true positives + false negatives)) 82.26 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
51 sequences

RS281_ARATH (Q9SR73), RS282_ARATH (P34789), RS28A_YEAST (Q3E7X9), 
RS28B_YEAST (P0C0X0), RS28_AERPE  (Q9Y9A6), RS28_ARCFU  (O29493), 
RS28_ASHGO  (Q74ZD8), RS28_BOMMO  (Q6PS50), RS28_BOVIN  (Q56JX6), 
RS28_CAEEL  (Q95Y04), RS28_CANGA  (Q6FLC3), RS28_DANRE  (Q6PBK3), 
RS28_DICDI  (Q54MZ5), RS28_DROME  (Q9W334), RS28_HUMAN  (P62857), 
RS28_HYPBU  (A2BK95), RS28_ICTPU  (Q90YP3), RS28_KLULA  (P33285), 
RS28_KLUMA  (P33286), RS28_MAIZE  (P46302), RS28_META3  (A6UT50), 
RS28_METJA  (P54065), RS28_METKA  (Q8TVE7), RS28_METM5  (A4FYI6), 
RS28_METM6  (A9A7E6), RS28_METM7  (A6VJU6), RS28_METMP  (Q6LZI8), 
RS28_METS5  (A4YCQ2), RS28_METVS  (A6USH4), RS28_MOUSE  (P62858), 
RS28_NEUCR  (Q7S6W5), RS28_PAPDA  (Q6EV21), RS28_PICTO  (Q6KZI6), 
RS28_PIG    (Q6QAT1), RS28_PYRAB  (P61029), RS28_PYRAE  (Q8ZTA7), 
RS28_PYRAR  (A4WLP1), RS28_PYRFU  (Q8U159), RS28_PYRHO  (P61030), 
RS28_PYRIL  (A1RS33), RS28_PYRNV  (B1Y9V2), RS28_RAT    (P62859), 
RS28_SCHPO  (Q10421), RS28_SPOFR  (Q962Q2), RS28_SULAC  (Q4JAV1), 
RS28_SULSO  (Q980Q5), RS28_SULTO  (Q975Z8), RS28_THEAC  (P57711), 
RS28_THEKO  (Q5JGR4), RS28_THEPD  (A1RXH2), RS28_THEVO  (Q97BK7)
» More

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

RS28_HALLT  (B9LPY3), RS28_HALS3  (B0R500), RS28_HALSA  (P57710), 
RS28_HALWD  (Q18GA9), RS28_KORCO  (B1L5N5), RS28_METAC  (Q8TQL8), 
RS28_METMA  (Q8PU75), RS28_METTH  (O26356), RS28_NANEQ  (P61031), 
RS28_NATPD  (Q3IPM8), RS28_OSTOS  (O61590)
» More

UniProtKB/Swiss-Prot
False positive sequences
2 sequences

IF2_CYTH3   (Q11PK5), SYI_LACLA   (Q9CEH8)

		
PDB
[Detailed view]
8 PDB

1NY4; 3J20; 3J38; 3J3A; 3U5C; 3U5G; 4BYL; 4BYT

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