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Entry: PS00978
General information about the entry
Entry nameFAD_G3PDH_2
Accession numberPS00978
Entry typePATTERN
DateJUN-1994 (CREATED); NOV-1997 (DATA UPDATE); DEC-2011 (INFO UPDATE).
PROSITE DocumentationPDOC00753
Name and characterization of the entry
DescriptionFAD-dependent glycerol-3-phosphate dehydrogenase signature 2.
PatternG-G-K-x(2)-[GSTE]-Y-R-x(2)-A.
Numerical results
  • UniProtKB/Swiss-Prot release number: 01, total number of sequence entries in that release: 534242.
  • Total number of hits in UniProtKB/Swiss-Prot: 37 hits in 37 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 37 hits in 37 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 9
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 80.43 %
Comments
  • Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-ProtTrue positive hits:
GLPA_ECO57  (P0A9C1), GLPA_ECOLI  (P0A9C0), GLPA_HAEIN  (P43799), 
GLPA_SHIFL  (P0A9C2), GLPD1_MYCBO (P64183), GLPD1_MYCTU (P64182), 
GLPD2_MYCBO (P64185), GLPD2_MYCTU (P64184), GLPD_BACSU  (P18158), 
GLPD_ECOLI  (P13035), GLPD_MYCLE  (P53435), GLPD_PSEAE  (P52111), 
GLPD_PSETO  (O83004), GLPD_STAA3  (Q2FHD8), GLPD_STAA8  (Q2FYZ4), 
GLPD_STAAB  (Q2YXR5), GLPD_STAAC  (Q5HGD1), GLPD_STAAM  (Q99UH2), 
GLPD_STAAN  (Q7A5V7), GLPD_STAAR  (Q6GHD4), GLPD_STAAS  (Q6G9R2), 
GLPD_STAAW  (Q7A105), GLPD_STAEQ  (Q5HPP0), GLPD_STAES  (Q8CPE6), 
GLPD_STAHJ  (Q4L608), GLPD_STAS1  (Q49X94), GPDM_BOVIN  (A6QLU1), 
GPDM_CAEEL  (P90795), GPDM_DICDI  (Q54QC1), GPDM_HUMAN  (P43304), 
GPDM_MACFA  (Q4R755), GPDM_MESAU  (A7DZP8), GPDM_MOUSE  (Q64521), 
GPDM_RAT    (P35571), GPDM_SCHPO  (O14400), GPDM_YEAST  (P32191), 
SDP6_ARATH  (Q9SS48)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
GLPD_SYNY3  (P74257), GLPO_ENTCA  (O86963), GLPO_LACLA  (Q9CG65), 
GLPO_STRP1  (Q99YI8), GLPO_STRP3  (P0DB20), GLPO_STRP6  (Q5XAK0), 
GLPO_STRP8  (Q8NZX0), GLPO_STRPN  (P35596), GLPO_STRPQ  (P0DB21)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		2QCU; 2R45; 2R46; 2R4E; 2R4J;

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