Entry: PS00993

General information about the entry

Entry name [info] RIBOSOMAL_L30E_2
Accession [info] PS00993
Entry type [info] PATTERN
Date [info] DEC-1992 (CREATED); DEC-2004 (DATA UPDATE); OCT-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00588

Name and characterization of the entry

Description [info] Ribosomal protein L30e signature 2.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_11 which contains 549'832 sequence entries.

Total number of hits 61 in 61 different sequences
Number of true positive hits 59 in 59 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 4
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 96.72 %
Recall (true positives / (true positives + false negatives)) 93.65 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

True positive sequences
59 sequences

RL301_ARATH (Q9C8F7), RL302_ARATH (Q8VZ19), RL303_ARATH (Q9LSA3), 
RL30A_SCHPO (P52808), RL30B_SCHPO (Q9UTP0), RL30E_AERPE (Q9YAU3), 
RL30E_ARCFU (O28389), RL30E_METAC (Q8TRB9), RL30E_METJA (P54061), 
RL30E_METKA (Q8TXJ0), RL30E_METM5 (A4FWF4), RL30E_METM6 (A9A9U8), 
RL30E_METS3 (A5ULN4), RL30E_METST (Q2NEK6), RL30E_METTH (O27127), 
RL30E_METTP (A0B560), RL30E_METVS (P14025), RL30E_PYRAB (Q9V112), 
RL30E_PYRHO (O74018), RL30E_PYRIL (A1RSE6), RL30E_PYRNV (B1YC27), 
RL30E_SULAC (P11522), RL30E_SULSO (Q980R3), RL30E_SULTO (P58376), 
RL30E_THECE (P29160), RL30E_THEGJ (C5A206), RL30E_THEKO (Q5JE35), 
RL30E_THESM (C6A1G2), RL30_ASHGO  (Q752U5), RL30_BOVIN  (Q3T0D5), 
RL30_BRABE  (P58374), RL30_CANGA  (Q6FXZ0), RL30_CHICK  (P67883), 
RL30_DICDI  (Q55BS9), RL30_EUPES  (Q9M5M6), RL30_HUMAN  (P62888), 
RL30_ICTPU  (P58372), RL30_KLULA  (P38664), RL30_LEIMA  (P39095), 
RL30_LUPLU  (O49884), RL30_MACFA  (Q76KA2), RL30_MAIZE  (O48558), 
RL30_MOUSE  (P62889), RL30_NEUCR  (Q7S7F1), RL30_OPHHA  (P67884), 
RL30_ORYSJ  (Q9SDG6), RL30_RAT    (P62890), RL30_SPOFR  (P58375), 
RL30_TETTS  (P0DJ59), RL30_TRYBB  (P49153), RL30_WHEAT  (Q5I7K9), 
RL30_YARLI  (Q6C4U7), RL30_YEAST  (P14120)
» more

False negative sequences
4 sequences

RL30E_CALMQ (A8MB78), RL30E_METB6 (A7I9N4), RL30E_METHJ (Q2FPJ8), 
» more

False positive sequences
2 sequences

MARC2_MOUSE (Q922Q1), MARC2_RAT   (O88994)

[Detailed view]
21 PDB

1CK2; 1CN7; 1GO0; 1GO1; 1H7M; 1NMU; 1T0K; 1W3E; 1W40; 1W41; 1W42; 1YSH; 2BO1; 3CPQ; 3LFO; 3N4Y; 3N4Z; 3RA5; 3RA6; 3VI6; 4ADX
» more

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