Entry: PS01050

General information about the entry

Entry name [info] YJEF_C_2
Accession [info] PS01050
Entry type [info] PATTERN
Date [info] 01-NOV-1995 CREATED; 01-NOV-1997 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00806

Name and characterization of the entry

Description [info] YjeF C-terminal domain signature 2.
Pattern [info] 
[GA]-G-x-G-D-[TV]-[LT]-[STA]-G-x-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 51 in 51 different sequences
Number of true positive hits 51 in 51 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 40
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 56.04 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 51 sequences 

NNRD_AJECG  (C0NFV9    ), NNRD_ASPFU  (Q4X1F8    ), NNRD_BACSU  (P94368    ), 

NNRD_BATDJ  (F4NZ38    ), NNRD_BORPE  (Q7VU32    ), NNRD_CAEBR  (A8X354    ), 
NNRD_CAEEL  (P32740    ), NNRD_CANAL  (Q59M69    ), NNRD_CANAW  (C4YSU5    ), 
NNRD_COPC7  (A8N8Z0    ), NNRD_EMENI  (Q5B0D6    ), NNRD_ENTFA  (Q833Y3    ), 
NNRD_ENTHI  (C4LZV8    ), NNRD_FLAPJ  (A6GXW4    ), NNRD_LACLA  (Q9CIU7    ), 
NNRD_LACPL  (F9UN92    ), NNRD_LISMO  (Q8Y6R2    ), NNRD_NECH7  (C7YKN8    ), 
NNRD_NEUCR  (Q7SHU9    ), NNRD_NITMS  (A9A498    ), NNRD_PHANO  (Q0UVK8    ), 
NNRD_PHATC  (B7FXE8    ), NNRD_POLPP  (D3BMU4    ), NNRD_RHOBA  (Q7UFW7    ), 
NNRD_STAA8  (Q2G2P8    ), NNRD_STRR6  (Q8DQD2    ), NNRD_STRTR  (P96051    ), 
NNRD_USTMA  (Q4P219    ), NNRD_YEAST  (P36059    ), NNR_AQUAE   (O67377    ), 
NNR_DICTD   (B8E2P6    ), NNR_ECOLI   (P31806    ), NNR_GLOVI   (Q7NIE6    ), 
NNR_HELPJ   (Q9ZJM4    ), NNR_HELPY   (P56176    ), NNR_KORCO   (B1L3W1    ), 
NNR_LEIBR   (A4H7T9    ), NNR_LEIIN   (A4HW65    ), NNR_LEIMA   (Q4QFL5    ), 
NNR_METJA   (Q58981    ), NNR_METKA   (Q8TX67    ), NNR_MOOTA   (Q2RGI2    ), 
NNR_MYCLE   (P37391    ), NNR_MYCTO   (P9WF10    ), NNR_MYCTU   (P9WF11    ), 
NNR_PYRAE   (Q8ZV04    ), NNR_SYNY3   (P74217    ), NNR_THEEB   (Q8DGC3    ), 
NNR_THEMA   (Q9X024    ), NNR_THEYD   (B5YIM0    ), NNR_VIBCH   (Q9KMX5    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 40 sequences 

NNRD1_PUCGT (E3LAQ9    ), NNRD2_PUCGT (E3L9T1    ), NNRD_AEDAE  (Q17NP0    ), 

NNRD_ANODA  (E3XDZ8    ), NNRD_ARATH  (Q94AF2    ), NNRD_BOVIN  (E1BNQ4    ), 
NNRD_CANLF  (E2QUI9    ), NNRD_CENSY  (A0RU82    ), NNRD_CIOIN  (F6RCC2    ), 
NNRD_CRYNJ  (Q5K8L4    ), NNRD_DANRE  (F1Q575    ), NNRD_DICDI  (Q54FJ9    ), 
NNRD_DROME  (Q9VVW8    ), NNRD_DROPS  (B5DHB2    ), NNRD_HALTV  (D2RXF6    ), 
NNRD_HUMAN  (Q8IW45    ), NNRD_IXOSC  (B7PBI5    ), NNRD_MACMU  (F7E727    ), 
NNRD_MOUSE  (Q9CZ42    ), NNRD_NATMM  (D3SQW0    ), NNRD_NEIG1  (Q5F8G9    ), 
NNRD_NEIMB  (Q9JRZ9    ), NNRD_NEMVE  (A7RRZ8    ), NNRD_PEDHC  (E0VSF4    ), 
NNRD_PHYPA  (A9RY03    ), NNRD_PONAB  (Q5R824    ), NNRD_RAT    (D4AAT7    ), 
NNRD_SCHPO  (O94347    ), NNRD_SORBI  (C5Y210    ), NNRD_VITVI  (F6HDM2    ), 
NNRD_XANCP  (Q8PBP3    ), NNR_ARCFU   (O29407    ), NNR_CORGL   (Q8NSS3    ), 
NNR_COXBU   (Q83CM5    ), NNR_HYPBU   (A2BLC0    ), NNR_METHJ   (Q2FT57    ), 
NNR_METTH   (O27324    ), NNR_SALRD   (Q2S580    ), NNR_THEAS   (D1BAA5    ), 
NNR_THEPD   (A1S0R2    )
» more

PDB
[Detailed view]		 34 PDB

1KYH; 2AX3; 2R3B; 2R3E; 3K5W; 3RPH; 3RPZ; 3RQ2; 3RQ5; 3RQ6; 3RQ8; 3RQH; 3RQQ; 3RQX; 3RRB; 3RRE; 3RRF; 3RRJ; 3RS8; 3RS9; 3RSF; 3RSG; 3RSQ; 3RSS; 3RT7; 3RT9; 3RTA; 3RTB; 3RTC; 3RTD; 3RTE; 3RTG; 3RU2; 3RU3
» more

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission