Entry: PS01077

General information about the entry
Entry name RIBOSOMAL_L37E
Accession number PS01077
Entry type PATTERN
Date NOV-1995 (CREATED); APR-2006 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00827
Name and characterization of the entry
DescriptionRibosomal protein L37e signature.
Pattern G-T-x-[SAVTP]-x-G-x-[KRHIM]-x(4,5)-H-x(2)-C-x-R-C-G.
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 74 hits in 74 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 74 hits in 74 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  • Number of known missed hits: 3
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 1
  • Precision (true hits / (true hits + false positives)): 100.00 %
  • Recall (true hits / (true hits + false negatives)): 96.10 %
Comments
  • Taxonomic range: Archaea, Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 2
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RL371_ARATH (Q8LFH7), RL371_DROME (Q9VXX8), RL372_ARATH (Q43292), 
RL372_DROME (Q9W1U6), RL373_ARATH (Q8LEM8), RL37A_SCHPO (P59289), 
RL37A_YEAST (P49166), RL37B_SCHPO (P05733), RL37B_YEAST (P51402), 
RL37_AERPE  (Q9YEQ4), RL37_ARCFU  (O29387), RL37_BOVIN  (P79244), 
RL37_CAEEL  (P49622), RL37_CALMQ  (A8MA81), RL37_CANAX  (Q9P836), 
RL37_DEBHA  (Q6BPF6), RL37_DESK1  (B8D688), RL37_DICDI  (Q54MG6), 
RL37_EMENI  (Q9C0T1), RL37_HALLT  (B9LQK2), RL37_HALMA  (P32410), 
RL37_HALS3  (B0R5R1), RL37_HALSA  (Q9HPS3), RL37_HALWD  (Q18GA1), 
RL37_HUMAN  (P61927), RL37_HYPBU  (A2BN31), RL37_ICTPU  (Q90YT1), 
RL37_IGNH4  (A8AB57), RL37_LEIDO  (P62885), RL37_LEIIN  (P62886), 
RL37_META3  (A6UTQ8), RL37_METAC  (Q8TL48), RL37_METB6  (A7I4F7), 
RL37_METBF  (Q465S2), RL37_METBU  (Q12U31), RL37_METHJ  (Q2FT51), 
RL37_METJA  (P54011), RL37_METKA  (Q8TYS1), RL37_METM5  (A4FX24), 
RL37_METM6  (A9AAG2), RL37_METM7  (A6VG90), RL37_METMA  (Q8PZZ8), 
RL37_METMJ  (A3CS13), RL37_METMP  (Q6LY46), RL37_METPE  (B8GJW5), 
RL37_METS5  (A4YIY8), RL37_METST  (Q2NF48), RL37_METTH  (O26744), 
RL37_METVS  (A6UPF4), RL37_MOUSE  (Q9D823), RL37_NATPD  (Q3INQ6), 
RL37_PYRAB  (P62004), RL37_PYRFU  (Q8U0P5), RL37_PYRHO  (P62005), 
RL37_PYRKO  (Q5JIE1), RL37_RAT    (P61928), RL37_SCHMA  (O44125), 
RL37_SPOFR  (Q962S7), RL37_STAMF  (A3DN33), RL37_SULAC  (Q4JAZ9), 
RL37_SULIA  (C3N5P3), RL37_SULIK  (C4KHB9), RL37_SULIL  (C3MQ25), 
RL37_SULIM  (C3MVE4), RL37_SULIN  (C3NHE2), RL37_SULIY  (C3NEA7), 
RL37_SULSO  (Q97ZQ1), RL37_SULTO  (Q975S6), RL37_TETTS  (P0DJ24), 
RL37_THEAC  (Q9HIT7), RL37_THEGJ  (C5A1H2), RL37_THEON  (B6YUU6), 
RL37_THEPD  (A1RX99), RL37_THEVO  (Q97BU6)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
RL37_CENSY  (A0RZA3), RL37_METTP  (A0B5Q5), RL37_NITMS  (A9A2Y8)
`Potential' hits (partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences):
RL37_SOLLC  (P49212)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment

PDB
[Detailed view]		 1FFK; 1JJ2; 1K5Y; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S1I; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3CXC; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3IZS; 3J21; 3O58; 3O5H; 3OW2; 3U5E; 3U5I; 4A18; 4A19; 4A1B; 4A1D; 4B6A;

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