Entry: PS01104

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General information about the entry

Entry name [info] RIBOSOMAL_L13E
Accession [info] PS01104
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); DEC-2004 (DATA UPDATE); JUL-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00848

Name and characterization of the entry

Description [info] Ribosomal protein L13e signature.
Pattern [info]
[KR]-x-G-[KR]-G-F-[ST]-[LVF]-x-E-[LVI]-x(3)-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_09 which contains 546'439 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 6
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 83.33 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
30 sequences

RL131_ARATH (P41127), RL131_BRANA (P41128), RL132_ARATH (Q9SMT4), 
RL132_BRANA (P41129), RL133_ARATH (Q9FF90), RL13A_YEAST (Q12690), 
RL13B_YEAST (P40212), RL13E_AERPE (Q9YEN9), RL13E_SULSO (Q97W05), 
RL13E_SULTO (P58469), RL13_BOVIN  (Q56JZ1), RL13_CAEEL  (P91128), 
RL13_CANAL  (O59931), RL13_CHICK  (P41125), RL13_CHLSW  (O48513), 
RL13_CRIGR  (Q9Z313), RL13_DANRE  (Q90Z10), RL13_DICDI  (Q54E20), 
RL13_DROME  (P41126), RL13_HUMAN  (P26373), RL13_ICTPU  (Q90YV5), 
RL13_LUMRU  (O46157), RL13_MOUSE  (P47963), RL13_RAT    (P41123), 
RL13_SACEX  (Q876B2), RL13_SCHMA  (Q95043), RL13_SCHPO  (O74175), 
RL13_SPOFR  (Q962U1), RL13_TETTS  (P0DJ58), RL13_TOBAC  (P49627)
» More

UniProtKB/Swiss-Prot
False negative sequences
6 sequences

RL13E_SULIA (C3N178), RL13E_SULIK (C4KKE5), RL13E_SULIL (C3MKC0), 
RL13E_SULIM (C3MU90), RL13E_SULIN (C3NMT7), RL13E_SULIY (C3N968)
» More

PDB
[Detailed view]
15 PDB

1VW8; 1VWU; 3J39; 3J3B; 3J65; 3U5E; 3U5I; 4A18; 4A19; 4A1B; 4A1D; 4B6A; 4BYN; 4BYU; 4CUW
» More

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