Entry: PS01112

General information about the entry

Entry name [info] RNA_POL_N_8KD
Accession [info] PS01112
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); MAR-2002 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00856

Name and characterization of the entry

Description [info] RNA polymerases N / 8 Kd subunits signature.
Pattern [info]
[LIVMFD]-[LIVMFP]-P-[LIVM]-x-C-[FL]-[ST]-C-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_06 which contains 551'385 sequence entries.


Total number of hits 73 in 73 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.65 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] zinc at position 6
Site [info] zinc at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
73 sequences

NRPBA_ARATH (Q8LFJ6    ), RPAB5_ASHGO (Q75BV8    ), RPAB5_BOVIN (Q32P78    ), 
RPAB5_BRANA (Q39290    ), RPAB5_CAEBR (A8Y1E9    ), RPAB5_CAEEL (Q9GR61    ), 
RPAB5_CHILA (Q6QN04    ), RPAB5_DICDI (Q55AB6    ), RPAB5_DROME (Q9VC49    ), 
RPAB5_ENCCU (Q8SRS6    ), RPAB5_HUMAN (P62875    ), RPAB5_MOUSE (P62876    ), 
RPAB5_SCHPO (O13877    ), RPAB5_YEAST (P22139    ), RPB10_ASFB7 (P42488    ), 
RPB10_ASFK5 (P0C982    ), RPB10_ASFM2 (P0C980    ), RPB10_ASFP4 (P0C979    ), 
RPB10_ASFWA (P0C981    ), RPBAL_ARATH (Q9SYA6    ), RPON_AERPE  (Q9YB47    ), 
RPON_ARCFU  (O29135    ), RPON_HALLT  (B9LPW4    ), RPON_HALMA  (P29199    ), 
RPON_HALS3  (B0R4Y6    ), RPON_HALSA  (Q9HQJ1    ), RPON_HALWD  (Q18G60    ), 
RPON_HYPBU  (A2BK83    ), RPON_METAC  (Q8TT41    ), RPON_METAR  (Q0W8C7    ), 
RPON_METB6  (A7IAH1    ), RPON_METBF  (Q46CK8    ), RPON_METBU  (Q12TI4    ), 
RPON_METHJ  (Q2FTN7    ), RPON_METJA  (Q57649    ), RPON_METKA  (Q8TVB4    ), 
RPON_METLZ  (A2SSV3    ), RPON_METM5  (A4FWK8    ), RPON_METM6  (A9A9Y7    ), 
RPON_METM7  (A6VGR3    ), RPON_METMA  (Q8PW43    ), RPON_METMJ  (A3CWI3    ), 
RPON_METMP  (Q6LXM4    ), RPON_METPE  (B8GEG1    ), RPON_METS5  (A4YIM8    ), 
RPON_METTH  (O26147    ), RPON_METTP  (A0B6E7    ), RPON_METVS  (A6UPX1    ), 
RPON_NANEQ  (Q74MB5    ), RPON_NATPD  (Q3IQT2    ), RPON_PICTO  (Q6L292    ), 
RPON_PYRAB  (P60291    ), RPON_PYRAE  (Q8ZYP9    ), RPON_PYRAR  (A4WNA8    ), 
RPON_PYRCJ  (A3MXZ9    ), RPON_PYRFU  (P60292    ), RPON_PYRHO  (O59298    ), 
RPON_PYRIL  (A1RSD9    ), RPON_PYRNV  (B1YC34    ), RPON_STAMF  (A3DMR0    ), 
RPON_SULAC  (P39472    ), RPON_SULIA  (C3N058    ), RPON_SULIK  (C4KJ97    ), 
RPON_SULIL  (C3MJQ1    ), RPON_SULIM  (C3MZ09    ), RPON_SULIN  (C3NMP6    ), 
RPON_SULIY  (C3N8S2    ), RPON_SULSO  (Q980Z8    ), RPON_SULTO  (Q96YW4    ), 
RPON_THEAC  (Q9HL09    ), RPON_THEKO  (Q5JJC9    ), RPON_THEON  (B6YSQ7    ), 
RPON_THEVO  (Q979K0    )
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

RPON_CALMQ  (A8M9S4    )

		
PDB
[Detailed view]
124 PDB

1EF4; 1I3Q; 1I50; 1I6H; 1K83; 1NIK; 1NT9; 1PQV; 1R5U; 1R9S; 1R9T; 1SFO; 1TWA; 1TWC; 1TWF; 1TWG; 1TWH; 1WCM; 1Y1V; 1Y1W; 1Y1Y; 1Y77; 2B63; 2B8K; 2E2H; 2E2I; 2E2J; 2JA5; 2JA6; 2JA7; 2JA8; 2NVQ; 2NVT; 2NVX; 2NVY; 2NVZ; 2PMZ; 2R7Z; 2R92; 2R93; 2VUM; 2YU9; 3CQZ; 3FKI; 3GTG; 3GTJ; 3GTK; 3GTL; 3GTM; 3GTO; 3GTP; 3GTQ; 3H0G; 3H3V; 3HKZ; 3HOU; 3HOV; 3HOW; 3HOX; 3HOY; 3HOZ; 3I4M; 3I4N; 3J0K; 3J1N; 3K1F; 3K7A; 3M3Y; 3M4O; 3PO2; 3PO3; 3QT1; 3RZD; 3RZO; 3S14; 3S15; 3S16; 3S17; 3S1M; 3S1N; 3S1Q; 3S1R; 3S2D; 3S2H; 4A3B; 4A3C; 4A3D; 4A3E; 4A3F; 4A3G; 4A3I; 4A3J; 4A3K; 4A3L; 4A3M; 4A93; 4BBR; 4BBS; 4BXX; 4BXZ; 4BY1; 4BY7; 4C2M; 4C3H; 4C3I; 4C3J; 4QIW; 4V1M; 4V1N; 4V1O; 4X67; 4X6A; 4Y52; 4Y7N; 5C3E; 5C44; 5C4A; 5C4J; 5C4X; 5FJ8; 5FJ9; 5FJA; 5FLM; 5FMF
» more

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