Entry: PS01112

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General information about the entry

Entry name [info] RNA_POL_N_8KD
Accession [info] PS01112
Entry type [info] PATTERN
Date [info] NOV-1995 (CREATED); MAR-2002 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00856

Name and characterization of the entry

Description [info] RNA polymerases N / 8 Kd subunits signature.
Pattern [info]
[LIVMFD]-[LIVMFP]-P-[LIVM]-x-C-[FL]-[ST]-C-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 73 in 73 different sequences
Number of true positive hits 73 in 73 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.65 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Site [info] zinc at position 6
Site [info] zinc at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
73 sequences

NRPBA_ARATH (Q8LFJ6), RPAB5_ASHGO (Q75BV8), RPAB5_BOVIN (Q32P78), 
RPAB5_BRANA (Q39290), RPAB5_CAEBR (A8Y1E9), RPAB5_CAEEL (Q9GR61), 
RPAB5_CHILA (Q6QN04), RPAB5_DICDI (Q55AB6), RPAB5_DROME (Q9VC49), 
RPAB5_ENCCU (Q8SRS6), RPAB5_HUMAN (P62875), RPAB5_MOUSE (P62876), 
RPAB5_SCHPO (O13877), RPAB5_YEAST (P22139), RPB10_ASFB7 (P42488), 
RPB10_ASFK5 (P0C982), RPB10_ASFM2 (P0C980), RPB10_ASFP4 (P0C979), 
RPB10_ASFWA (P0C981), RPBAL_ARATH (Q9SYA6), RPON_AERPE  (Q9YB47), 
RPON_ARCFU  (O29135), RPON_HALLT  (B9LPW4), RPON_HALMA  (P29199), 
RPON_HALS3  (B0R4Y6), RPON_HALSA  (Q9HQJ1), RPON_HALWD  (Q18G60), 
RPON_HYPBU  (A2BK83), RPON_METAC  (Q8TT41), RPON_METB6  (A7IAH1), 
RPON_METBF  (Q46CK8), RPON_METBU  (Q12TI4), RPON_METHJ  (Q2FTN7), 
RPON_METJA  (Q57649), RPON_METKA  (Q8TVB4), RPON_METLZ  (A2SSV3), 
RPON_METM5  (A4FWK8), RPON_METM6  (A9A9Y7), RPON_METM7  (A6VGR3), 
RPON_METMA  (Q8PW43), RPON_METMJ  (A3CWI3), RPON_METMP  (Q6LXM4), 
RPON_METPE  (B8GEG1), RPON_METS5  (A4YIM8), RPON_METTH  (O26147), 
RPON_METTP  (A0B6E7), RPON_METVS  (A6UPX1), RPON_NANEQ  (Q74MB5), 
RPON_NATPD  (Q3IQT2), RPON_PICTO  (Q6L292), RPON_PYRAB  (P60291), 
RPON_PYRAE  (Q8ZYP9), RPON_PYRAR  (A4WNA8), RPON_PYRCJ  (A3MXZ9), 
RPON_PYRFU  (P60292), RPON_PYRHO  (O59298), RPON_PYRIL  (A1RSD9), 
RPON_PYRNV  (B1YC34), RPON_STAMF  (A3DMR0), RPON_SULAC  (P39472), 
RPON_SULIA  (C3N058), RPON_SULIK  (C4KJ97), RPON_SULIL  (C3MJQ1), 
RPON_SULIM  (C3MZ09), RPON_SULIN  (C3NMP6), RPON_SULIY  (C3N8S2), 
RPON_SULSO  (Q980Z8), RPON_SULTO  (Q96YW4), RPON_THEAC  (Q9HL09), 
RPON_THEKO  (Q5JJC9), RPON_THEON  (B6YSQ7), RPON_THEVO  (Q979K0), 
RPON_UNCMA  (Q0W8C7)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

RPON_CALMQ  (A8M9S4)

		
PDB
[Detailed view]
106 PDB

1EF4; 1I3Q; 1I50; 1I6H; 1K83; 1NIK; 1NT9; 1PQV; 1R5U; 1R9S; 1R9T; 1SFO; 1TWA; 1TWC; 1TWF; 1TWG; 1TWH; 1WCM; 1Y1V; 1Y1W; 1Y1Y; 1Y77; 2B63; 2B8K; 2E2H; 2E2I; 2E2J; 2JA5; 2JA6; 2JA7; 2JA8; 2NVQ; 2NVT; 2NVX; 2NVY; 2NVZ; 2PMZ; 2R7Z; 2R92; 2R93; 2VUM; 2YU9; 3CQZ; 3FKI; 3GTG; 3GTJ; 3GTK; 3GTL; 3GTM; 3GTO; 3GTP; 3GTQ; 3H0G; 3H3V; 3HKZ; 3HOU; 3HOV; 3HOW; 3HOX; 3HOY; 3HOZ; 3I4M; 3I4N; 3J0K; 3J1N; 3K1F; 3K7A; 3M3Y; 3M4O; 3PO2; 3PO3; 3QT1; 3RZD; 3RZO; 3S14; 3S15; 3S16; 3S17; 3S1M; 3S1N; 3S1Q; 3S1R; 3S2D; 3S2H; 4A3B; 4A3C; 4A3D; 4A3E; 4A3F; 4A3G; 4A3I; 4A3J; 4A3K; 4A3L; 4A3M; 4A93; 4BBR; 4BBS; 4BXX; 4BXZ; 4BY1; 4BY7; 4C2M; 4C3H; 4C3I; 4C3J
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