| General information about the entry |
| Entry name |
GLYCOSYL_HYDROL_F45 |
| Accession number |
PS01140 |
| Entry type |
PATTERN |
| Date |
NOV-1995 (CREATED); NOV-1997 (DATA UPDATE); MAR-2013 (INFO UPDATE).
|
| PROSITE Documentation |
PDOC00877 |
| Associated ProRule |
PRU10069 |
| Name and characterization of the entry |
| Description | Glycosyl hydrolases family 45 active site.
|
| Pattern |
[STA]-T-R-Y-[FYW]-D-x(5)-[CA].
|
| Numerical results |
- UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
- Total number of hits in UniProtKB/Swiss-Prot: 6 hits in 6 different sequences
- Number of hits on proteins that are known to belong to the set under consideration: 6 hits in 6 different sequences
- Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
- Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
- Number of known missed hits: 1
- Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
- Precision (true hits / (true hits + false positives)): 100.00 %
- Recall (true hits / (true hits + false negatives)): 85.71 %
|
| Comments |
- Taxonomic range: Eukaryotes, Prokaryotes (Bacteria)
- Maximum known number of repetitions of the pattern in a single protein: 1
- `Interesting' site in the pattern: 6,active_site
- VERSION: 1
|
| Cross-references |
| UniProtKB/Swiss-Prot |
True positive hits:GUN1_USTMA (P54424), GUN5_HUMIN (P43316), GUN5_HYPJE (P43317),
GUNB_CELJU (P18126), GUNK_FUSOX (P45699), GUN_PHACE (O97401) False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):GUN_MYTED (P82186) Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view]
[Clustal format, color]
[Clustal format, plain text]
[Fasta format]
Retrieve the sequence logo from the alignment
|
PDB [Detailed view] |
1HD5; 2ENG; 3ENG; |
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