Entry: PS01189

General information about the entry

Entry name [info] RIBOSOMAL_S12E
Accession [info] PS01189
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2001 (DATA UPDATE); MAY-2015 (INFO UPDATE).
PROSITE Doc. [info] PDOC00915

Name and characterization of the entry

Description [info] Ribosomal protein S12e signature.
Pattern [info]
[SA]-[LI]-[KREQP]-x(2)-[LIVM]-x(2)-[SA]-x(3)-[DNG]-G-[LIV]-x(2)-G-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_07 which contains 548'872 sequence entries.


Total number of hits 22 in 22 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.91 %
Recall (true positives / (true positives + false negatives)) 95.24 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
20 sequences

RS121_ARATH (Q9S9P1), RS122_ARATH (Q9SKZ3), RS12A_SCHPO (O14062), 
RS12B_SCHPO (O74322), RS12_BLUGH  (O59936), RS12_BOVIN  (Q76I81), 
RS12_CAEEL  (P49196), RS12_CHICK  (P84175), RS12_CYAPA  (Q9SMI3), 
RS12_DROME  (P80455), RS12_HORVU  (Q9XHS0), RS12_HUMAN  (P25398), 
RS12_MOUSE  (P63323), RS12_ORENI  (O13019), RS12_PIG    (P46405), 
RS12_PLAF7  (O97249), RS12_RAT    (P63324), RS12_TRYBB  (Q03253), 
RS12_XENLA  (P47840), RS12_YEAST  (P48589)
» More

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

RS12_DICDI  (Q54PX9)

		
UniProtKB/Swiss-Prot
False positive sequences
2 sequences

PLEK2_HUMAN (Q9NYT0), PLEK2_MOUSE (Q9WV52)

		
PDB
[Detailed view]
1 PDB

3J7A

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