Entry: PS01189

General information about the entry

Entry name [info] RIBOSOMAL_S12E
Accession [info] PS01189
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-DEC-2001 DATA UPDATE; 05-JUL-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00915

Name and characterization of the entry

Description [info] Ribosomal protein S12e signature.
Pattern [info] 
[SA]-[LI]-[KREQP]-x(2)-[LIVM]-x(2)-[SA]-x(3)-[DNG]-G-[LIV]-x(2)-G-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_07 which contains 555'100 sequence entries.


Total number of hits 22 in 22 different sequences
Number of true positive hits 20 in 20 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 90.91 %
Recall (true positives / (true positives + false negatives)) 95.24 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 20 sequences 

RS121_ARATH (Q9S9P1    ), RS122_ARATH (Q9SKZ3    ), RS12A_SCHPO (O14062    ), 

RS12B_SCHPO (O74322    ), RS12_BLUGH  (O59936    ), RS12_BOVIN  (Q76I81    ), 
RS12_CAEEL  (P49196    ), RS12_CHICK  (P84175    ), RS12_CYAPA  (Q9SMI3    ), 
RS12_DROME  (P80455    ), RS12_HORVU  (Q9XHS0    ), RS12_HUMAN  (P25398    ), 
RS12_MOUSE  (P63323    ), RS12_ORENI  (O13019    ), RS12_PIG    (P46405    ), 
RS12_PLAF7  (O97249    ), RS12_RAT    (P63324    ), RS12_TRYBB  (Q03253    ), 
RS12_XENLA  (P47840    ), RS12_YEAST  (P48589    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

RS12_DICDI  (Q54PX9    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
PLEK2_HUMAN (Q9NYT0    ), PLEK2_MOUSE (Q9WV52    )


				
	

	

		PDB
[Detailed view]		
		
			3 PDB
			


			3J7A; 5A2Q; 5FLX
				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission