Entry: PS01190

General information about the entry
Entry name RIBOSOMAL_L36E
Accession number PS01190
Entry type PATTERN
Date NOV-1997 (CREATED); DEC-2001 (DATA UPDATE); MAR-2013 (INFO UPDATE).
PROSITE Documentation PDOC00916
Name and characterization of the entry
DescriptionRibosomal protein L36e signature.
Pattern P-Y-E-[KR]-R-x-[LIVMT]-[DE]-[LIVM](2)-[KR].
Numerical results
  • UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  • Total number of hits in UniProtKB/Swiss-Prot: 26 hits in 26 different sequences
  • Number of hits on proteins that are known to belong to the set under consideration: 25 hits in 25 different sequences
  • Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  • Number of false hits (on unrelated proteins): 1 hits in 1 different sequences
  • Number of known missed hits: 2
  • Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  • Precision (true hits / (true hits + false positives)): 96.15 %
  • Recall (true hits / (true hits + false negatives)): 92.59 %
Comments
  • Taxonomic range: Eukaryotes
  • Maximum known number of repetitions of the pattern in a single protein: 1
  • VERSION: 1
Cross-references
UniProtKB/Swiss-Prot True positive hits:
RL361_ARATH (O80929), RL362_ARATH (Q9M352), RL363_ARATH (Q9LZ57), 
RL36A_SCHPO (Q92365), RL36A_YEAST (P05745), RL36B_SCHPO (O94658), 
RL36B_YEAST (O14455), RL36_BOVIN  (Q3T171), RL36_CAEEL  (P49181), 
RL36_CANAX  (P47834), RL36_CHICK  (Q98TF6), RL36_DANRE  (Q6Q415), 
RL36_DAUCA  (P52866), RL36_DROME  (P49630), RL36_HUMAN  (Q9Y3U8), 
RL36_ICTPU  (Q90YT2), RL36_LAPHA  (Q8UW19), RL36_MOUSE  (P47964), 
RL36_PONAB  (Q5RAZ9), RL36_RAT    (P39032), RL36_TETTS  (Q24F59), 
RL36_TRIHM  (Q9HFR7), RL36_ULVCO  (Q9LRB8), RL36_XENLA  (Q66KU4), 
RL36_XENTR  (Q6DER2)
False negative hits (sequences which belong to the set under consideration, but which have not been picked up by the pattern or profile):
RL36X_HUMAN (P0C6E6), RL36_DICDI  (Q55AQ9)
False positive hits (sequences which do not belong to the set under consideration):
COAD_PYRFU  (Q8U1X0)
Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:

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PDB
[Detailed view]		 3IZS; 3U5E; 3U5I; 4A18; 4A19; 4A1B; 4A1D; 4B6A;

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