Entry: PS01193

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General information about the entry

Entry name [info] RIBOSOMAL_S8E
Accession [info] PS01193
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); DEC-2004 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00918

Name and characterization of the entry

Description [info] Ribosomal protein S8e signature.
Pattern [info]
[KR]-x(2)-[ST]-G-[GAR]-x(5,6)-[KRHSA]-x-[KRT]-x-[KR]-x-[EA]-[LIMPA]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 71 in 71 different sequences
Number of true positive hits 70 in 70 different sequences
Number of 'unknown' hits
Number of false positive hits 1
Number of false negative sequences 13
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.59 %
Recall (true positives / (true positives + false negatives)) 84.34 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
70 sequences

RS81_ARATH  (Q93VG5), RS82_ARATH  (Q9FIF3), RS8A_SCHPO  (O14049), 
RS8A_YEAST  (P0CX39), RS8B_SCHPO  (Q9P7B2), RS8B_YEAST  (P0CX40), 
RS8E_AERPE  (Q9YDY0), RS8E_ARCFU  (O28130), RS8E_HALMA  (P49402), 
RS8E_HALS3  (B0R639), RS8E_HALSA  (Q9HPE9), RS8E_METAC  (Q8TS82), 
RS8E_METBF  (Q465V4), RS8E_METBU  (Q12UA1), RS8E_METHJ  (Q2FU12), 
RS8E_METJA  (P54055), RS8E_METKA  (Q8TV55), RS8E_METLZ  (A2STM4), 
RS8E_METM5  (A4G0R4), RS8E_METM6  (A9A907), RS8E_METM7  (A6VHS1), 
RS8E_METMA  (Q8PVC6), RS8E_METMP  (P61300), RS8E_METPE  (B8GJR4), 
RS8E_METS3  (A5UNB3), RS8E_METS5  (A4YD47), RS8E_METTH  (O26309), 
RS8E_METTP  (A0B8P7), RS8E_NANEQ  (P61301), RS8E_PICTO  (Q6L0D3), 
RS8E_PYRAB  (Q9UZL4), RS8E_PYRAE  (Q8ZTB8), RS8E_PYRAR  (A4WLM9), 
RS8E_PYRFU  (Q8U1Y5), RS8E_PYRHO  (O58830), RS8E_PYRNV  (B1Y9T9), 
RS8E_STAMF  (A3DNX9), RS8E_SULAC  (Q4JAP5), RS8E_SULIA  (C3MZT9), 
RS8E_SULIK  (C4KJ22), RS8E_SULIL  (C3MJ42), RS8E_SULIM  (C3MYT4), 
RS8E_SULIN  (C3NF48), RS8E_SULIY  (C3N864), RS8E_SULSO  (Q980W3), 
RS8E_SULTO  (Q976K3), RS8E_THEAC  (Q9HJD0), RS8E_THEGJ  (C5A4I6), 
RS8E_THEKO  (Q5JGF3), RS8E_THEON  (B6YTF2), RS8E_THEVO  (Q97BA2), 
RS8E_UNCMA  (Q0W1L5), RS8_APIME   (O76756), RS8_BOVIN   (Q5E958), 
RS8_CAEEL   (P48156), RS8_DANRE   (P62247), RS8_DROME   (Q8MLY8), 
RS8_HUMAN   (P62241), RS8_ICTPU   (Q90YR6), RS8_LEIMA   (P25204), 
RS8_MACFA   (Q4R6P8), RS8_MAIZE   (Q08069), RS8_MOUSE   (P62242), 
RS8_ORYSJ   (P49199), RS8_PRUAR   (O81361), RS8_RAT     (P62243), 
RS8_SPOFR   (Q8WQI5), RS8_THEAN   (Q4UFS9), RS8_THEPA   (Q4N3P0), 
RS8_XENLA   (Q7SYU0)
» More

UniProtKB/Swiss-Prot
False negative sequences
13 sequences

NSA2_SCHPO  (Q9UU79), RS8E_HALLT  (B9LQC4), RS8E_HALWD  (Q18F55), 
RS8E_HYPBU  (A2BK08), RS8E_IGNH4  (A8AAJ7), RS8E_META3  (A6UWP2), 
RS8E_METB6  (A7IAR0), RS8E_METMJ  (A3CSQ2), RS8E_METST  (Q2NEU6), 
RS8E_METVS  (A6UQT9), RS8E_PYRCJ  (A3MWY2), RS8E_PYRIL  (A1RS21), 
RS8_DICDI   (Q54E24)
» More

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

EFG_MAGSA   (Q2W2I8)

		
PDB
[Detailed view]
9 PDB

2KCO; 3J20; 3J38; 3J3A; 3J43; 3U5C; 3U5G; 4BYL; 4BYT

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