Entry: PS01194

Forthcoming changes to the profile format
General information about the entry

Entry name [info] RIBOSOMAL_L15E
Accession [info] PS01194
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); DEC-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00919

Name and characterization of the entry

Description [info] Ribosomal protein L15e signature.
Pattern [info]

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2015_01 which contains 547'357 sequence entries.

Total number of hits 87 in 87 different sequences
Number of true positive hits 87 in 87 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 7
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 92.55 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

True positive sequences
87 sequences

RL151_ARATH (O23515), RL152_ARATH (Q8VYF1), RL15A_PICMA (O65050), 
RL15A_SCHPO (O74895), RL15A_YEAST (P05748), RL15B_PICMA (O65082), 
RL15B_SCHPO (Q9US22), RL15B_YEAST (P54780), RL15E_AERPE (Q9YBZ8), 
RL15E_ARCFU (O27965), RL15E_DESK1 (B8D6C6), RL15E_HALLT (B9LSV1), 
RL15E_HALMA (P60618), RL15E_HALS3 (B0R2U1), RL15E_HALSA (Q9HSL2), 
RL15E_HALWD (Q18K99), RL15E_META3 (A6UX54), RL15E_METAC (Q8TPX0), 
RL15E_METJA (P54060), RL15E_METKA (Q8TYB3), RL15E_METLZ (A2ST55), 
RL15E_METM5 (A4FZN9), RL15E_METM6 (A9A7T0), RL15E_METM7 (A6VIT8), 
RL15E_METMA (Q8PTU5), RL15E_METMP (P61370), RL15E_METST (Q2NEY3), 
RL15E_METTH (O26786), RL15E_NANEQ (Q74MN8), RL15E_NATPD (Q3IUG6), 
RL15E_PYRFU (Q8U2F9), RL15E_PYRHO (O58706), RL15E_STAMF (A3DMU2), 
RL15E_THEAC (P49403), RL15E_THEGJ (C5A1N3), RL15E_THEKO (Q5JH43), 
RL15E_THEON (B6YSU2), RL15E_THEVO (Q97BC1), RL15_ANGJA  (Q7T3P1), 
RL15_ANOGA  (P52818), RL15_ASPNG  (O13418), RL15_BOVIN  (Q5EAD6), 
RL15_BRANA  (P46289), RL15_BRUPA  (P41961), RL15_CAEEL  (P91374), 
RL15_CANFA  (E2QXF3), RL15_CARAU  (Q7T3N9), RL15_CHICK  (P51417), 
RL15_CHITE  (P30736), RL15_CTEID  (Q7T3N8), RL15_CYPCA  (Q7T3N7), 
RL15_DICDI  (Q86K01), RL15_DROME  (O17445), RL15_EPICO  (P61367), 
RL15_HUMAN  (P61313), RL15_HYDVU  (P61368), RL15_HYPMO  (Q7T3N6), 
RL15_HYPNO  (Q7T3P0), RL15_ICTPU  (Q90YV2), RL15_MACFA  (Q4R5B2), 
RL15_MEGAM  (Q7T3N4), RL15_MONAL  (Q7T3N2), RL15_MOUSE  (Q9CZM2), 
RL15_MYLPI  (Q7T3N1), RL15_NEUCR  (Q8X034), RL15_ORCLI  (Q9XYC2), 
RL15_PARDA  (Q7T3N3), RL15_PETHY  (O82528), RL15_PONAB  (Q5NVE0), 
RL15_QUESU  (O82712), RL15_RAT    (P61314), RL15_SILAS  (P61369), 
RL15_SILME  (Q7T2N4), RL15_SINKN  (Q7T3M9), RL15_TACFU  (Q7T2N5)
» More

False negative sequences
7 sequences

RL15E_METB6 (A7I9D0), RL15E_METBU (Q12ZC4), RL15E_METHJ (Q2FT55), 
RL15E_METMJ (A3CW58), RL15E_METS5 (A4YCU5), RL15E_UNCMA (Q0W2Z5), 
RL15_TETTS  (Q22A30)
» More

'Partial' sequences
1 sequence

RL15_PIG    (P79324)

[Detailed view]
120 PDB

1FFK; 1JJ2; 1K73; 1K8A; 1K9M; 1KC8; 1KD1; 1KQS; 1M1K; 1M90; 1N8R; 1NJI; 1Q7Y; 1Q81; 1Q82; 1Q86; 1QVF; 1QVG; 1S1I; 1S72; 1VQ4; 1VQ5; 1VQ6; 1VQ7; 1VQ8; 1VQ9; 1VQK; 1VQL; 1VQM; 1VQN; 1VQO; 1VQP; 1VW8; 1VWU; 1VXV; 1VXY; 1W2B; 1YHQ; 1YI2; 1YIJ; 1YIT; 1YJ9; 1YJN; 1YJW; 2OTJ; 2OTL; 2QA4; 2QEX; 2ZKR; 3CC2; 3CC4; 3CC7; 3CCE; 3CCJ; 3CCL; 3CCM; 3CCQ; 3CCR; 3CCS; 3CCU; 3CCV; 3CD6; 3CMA; 3CME; 3CPW; 3G4S; 3G6E; 3G71; 3I55; 3I56; 3IZS; 3J21; 3J39; 3J3B; 3J44; 3J65; 3O58; 3O5H; 3U5E; 3U5I; 4ADX; 4B6A; 4BYN; 4BYU; 4CUW; 4HUB; 4UJH; 4UJJ; 4UJM; 4UJO; 4UJR; 4UJT; 4UJW; 4UJY; 4UK1; 4UK3; 4UK6; 4UK8; 4UKB; 4UKE; 4UKH; 4UKJ; 4UKM; 4UKO; 4UKR; 4UKT; 4UKW; 4UKY; 4UL1; 4UL3; 4UL6; 4UL8; 4ULB; 4ULD; 4ULG; 4ULI; 4ULM; 4ULO; 4ULR; 4ULT
» More

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission