Entry: PS01211

General information about the entry

Entry name [info] UPF0001
Accession [info] PS01211
Entry type [info] PATTERN
Date [info] 01-NOV-1997 CREATED; 01-DEC-2004 DATA UPDATE; 10-MAY-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC00931

Name and characterization of the entry

Description [info] Uncharacterized protein family UPF0001 signature.
Pattern [info]
[FW]-H-[FM]-[IV]-G-x-[LIV]-Q-x-[NKRQ]-[KN]-x(3)-[LIV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_05 which contains 554'515 sequence entries.


Total number of hits 28 in 28 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.33 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
28 sequences

PLPHP_AQUAE (O66631    ), PLPHP_BACSU (O31727    ), PLPHP_BUCAI (P57614    ), 
PLPHP_BUCAP (Q8K929    ), PLPHP_CORGL (O24748    ), PLPHP_DEIRA (Q9RUL6    ), 
PLPHP_ECO57 (P67082    ), PLPHP_ECOL6 (P67081    ), PLPHP_ECOLI (P67080    ), 
PLPHP_HAEIN (P44506    ), PLPHP_HELPJ (Q9ZKF2    ), PLPHP_HELPY (O25156    ), 
PLPHP_MYCBO (P67084    ), PLPHP_MYCLE (Q9CCE2    ), PLPHP_MYCTO (P9WFQ6    ), 
PLPHP_MYCTU (P9WFQ7    ), PLPHP_PASMU (Q9CPD5    ), PLPHP_PSEAE (P24562    ), 
PLPHP_SYNY3 (P52056    ), PLPHP_VIBAL (P52055    ), PLPHP_VIBCH (Q9KUQ4    ), 
PROSC_BOVIN (Q3T0G5    ), PROSC_CAEEL (P52057    ), PROSC_DICDI (Q1ZXI6    ), 
PROSC_HUMAN (O94903    ), PROSC_MOUSE (Q9Z2Y8    ), PROSC_PONAB (Q5R4Z1    ), 
YBD6_YEAST  (P38197    )
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

PLPHP_BUCBP (Q89A48    ), YKC9_SCHPO  (Q9P6Q1    )

		
PDB
[Detailed view]
3 PDB

1B54; 1CT5; 1W8G

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