Entry: PS01257

General information about the entry

Entry name [info] RIBOSOMAL_L10E
Accession [info] PS01257
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00968

Name and characterization of the entry

Description [info] Ribosomal protein L10e signature.
Pattern [info]
A-D-R-x(3)-[GR]-[MH]-R-x-[SAP]-[FYW]-G-[KRVTS]-[PANI]-x-[GS]-x(1,2)-A-
[KRLV]-[LIVQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 91 in 91 different sequences
Number of true positive hits 91 in 91 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.85 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
91 sequences

RL101_ARATH (Q93VT9    ), RL101_ORYSI (A2ZCQ7    ), RL101_ORYSJ (Q0ITS8    ), 
RL102_ARATH (Q08770    ), RL102_ORYSI (A2Y0T4    ), RL102_ORYSJ (Q0DKF0    ), 
RL103_ARATH (Q93W22    ), RL10A_SCHPO (Q09127    ), RL10B_SCHPO (Q9P769    ), 
RL10E_AERPE (Q9YEY5    ), RL10E_ARCFU (O28930    ), RL10E_HALLT (B9LQR1    ), 
RL10E_HALMA (P60617    ), RL10E_HALS3 (B0R2M5    ), RL10E_HALSA (Q9HSS4    ), 
RL10E_HALWD (Q18KD2    ), RL10E_HYPBU (A2BNA6    ), RL10E_META3 (A6USY4    ), 
RL10E_METAC (Q8TU90    ), RL10E_METAR (Q0W389    ), RL10E_METBF (Q46CR0    ), 
RL10E_METBU (Q12W43    ), RL10E_METJA (Q57963    ), RL10E_METKA (Q8TYP2    ), 
RL10E_METLZ (A2SQE9    ), RL10E_METM5 (A4FWP5    ), RL10E_METM6 (A9AA25    ), 
RL10E_METM7 (A6VGM6    ), RL10E_METMA (Q8PWV0    ), RL10E_METMJ (A3CTT1    ), 
RL10E_METMP (Q6LXR0    ), RL10E_METPE (B8GH15    ), RL10E_METS5 (A4YHV3    ), 
RL10E_METST (Q2NHZ0    ), RL10E_METTH (O27191    ), RL10E_NANEQ (Q74M84    ), 
RL10E_NATPD (Q3IU82    ), RL10E_PICTO (Q6L152    ), RL10E_PYRAB (Q9UYU9    ), 
RL10E_PYRAE (Q8ZSV4    ), RL10E_PYRAR (A4WN05    ), RL10E_PYRCJ (A3MXP3    ), 
RL10E_PYRFU (Q9UWP5    ), RL10E_PYRHO (O58367    ), RL10E_PYRIL (A1RT11    ), 
RL10E_PYRNV (B1YDH6    ), RL10E_STAMF (A3DM76    ), RL10E_SULAC (Q4JC84    ), 
RL10E_SULIA (C3MZG3    ), RL10E_SULIK (C4KIP3    ), RL10E_SULIL (C3MRC8    ), 
RL10E_SULIM (C3MXL7    ), RL10E_SULIN (C3NFZ1    ), RL10E_SULIY (C3N7I5    ), 
RL10E_SULSO (Q980J7    ), RL10E_SULTO (Q96YA4    ), RL10E_THEAC (Q9HJB3    ), 
RL10E_THEGJ (C5A293    ), RL10E_THEKO (Q5JDI6    ), RL10E_THEON (B6YSL0    ), 
RL10E_THEPD (A1RXM2    ), RL10E_THESM (C6A4T2    ), RL10E_THEVO (P58299    ), 
RL10L_BOVIN (Q2TBW8    ), RL10L_HUMAN (Q96L21    ), RL10L_MACFA (Q4R4D3    ), 
RL10L_MOUSE (P86048    ), RL10_BOMMA  (O96647    ), RL10_BOVIN  (Q9XSI3    ), 
RL10_CAEEL  (Q09533    ), RL10_CHICK  (Q08200    ), RL10_DICDI  (Q54J69    ), 
RL10_DROME  (O61231    ), RL10_ENCCU  (Q8SR96    ), RL10_EUGGR  (Q39724    ), 
RL10_EUPES  (Q9M5M7    ), RL10_HUMAN  (P27635    ), RL10_MACFA  (Q4R7Y2    ), 
RL10_MAIZE  (P45633    ), RL10_MOUSE  (Q6ZWV3    ), RL10_PAPAN  (A9CB60    ), 
RL10_PIG    (Q29195    ), RL10_PINTA  (O22431    ), RL10_PONAB  (Q5R931    ), 
RL10_RAT    (Q6PDV7    ), RL10_SHEEP  (A8D8X1    ), RL10_SOLME  (P93847    ), 
RL10_TETTS  (Q235M8    ), RL10_TOBAC  (Q40592    ), RL10_VITRI  (Q9SPB3    ), 
RL10_YEAST  (P41805    )
» more

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

RL10E_CALMQ (A8MDE4    ), RL10E_METHJ (Q2FLD3    )

		
PDB
[Detailed view]
3 PDB

5AN9; 5ANB; 5ANC

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