Entry: PS01257

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General information about the entry

Entry name [info] RIBOSOMAL_L10E
Accession [info] PS01257
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); JUN-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC00968

Name and characterization of the entry

Description [info] Ribosomal protein L10e signature.
Pattern [info]
A-D-R-x(3)-[GR]-[MH]-R-x-[SAP]-[FYW]-G-[KRVTS]-[PANI]-x-[GS]-x(1,2)-A-
[KRLV]-[LIVQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_07 which contains 546'000 sequence entries.


Total number of hits 91 in 91 different sequences
Number of true positive hits 91 in 91 different sequences
Number of 'unknown' hits
Number of false positive hits
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.85 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
91 sequences

RL101_ARATH (Q93VT9), RL101_ORYSI (A2ZCQ7), RL101_ORYSJ (Q0ITS8), 
RL102_ARATH (Q08770), RL102_ORYSI (A2Y0T4), RL102_ORYSJ (Q0DKF0), 
RL103_ARATH (Q93W22), RL10A_SCHPO (Q09127), RL10B_SCHPO (Q9P769), 
RL10E_AERPE (Q9YEY5), RL10E_ARCFU (O28930), RL10E_HALLT (B9LQR1), 
RL10E_HALMA (P60617), RL10E_HALS3 (B0R2M5), RL10E_HALSA (Q9HSS4), 
RL10E_HALWD (Q18KD2), RL10E_HYPBU (A2BNA6), RL10E_META3 (A6USY4), 
RL10E_METAC (Q8TU90), RL10E_METBF (Q46CR0), RL10E_METBU (Q12W43), 
RL10E_METJA (Q57963), RL10E_METKA (Q8TYP2), RL10E_METLZ (A2SQE9), 
RL10E_METM5 (A4FWP5), RL10E_METM6 (A9AA25), RL10E_METM7 (A6VGM6), 
RL10E_METMA (Q8PWV0), RL10E_METMJ (A3CTT1), RL10E_METMP (Q6LXR0), 
RL10E_METPE (B8GH15), RL10E_METS5 (A4YHV3), RL10E_METST (Q2NHZ0), 
RL10E_METTH (O27191), RL10E_NANEQ (Q74M84), RL10E_NATPD (Q3IU82), 
RL10E_PICTO (Q6L152), RL10E_PYRAB (Q9UYU9), RL10E_PYRAE (Q8ZSV4), 
RL10E_PYRAR (A4WN05), RL10E_PYRCJ (A3MXP3), RL10E_PYRFU (Q9UWP5), 
RL10E_PYRHO (O58367), RL10E_PYRIL (A1RT11), RL10E_PYRNV (B1YDH6), 
RL10E_STAMF (A3DM76), RL10E_SULAC (Q4JC84), RL10E_SULIA (C3MZG3), 
RL10E_SULIK (C4KIP3), RL10E_SULIL (C3MRC8), RL10E_SULIM (C3MXL7), 
RL10E_SULIN (C3NFZ1), RL10E_SULIY (C3N7I5), RL10E_SULSO (Q980J7), 
RL10E_SULTO (Q96YA4), RL10E_THEAC (Q9HJB3), RL10E_THEGJ (C5A293), 
RL10E_THEKO (Q5JDI6), RL10E_THEON (B6YSL0), RL10E_THEPD (A1RXM2), 
RL10E_THESM (C6A4T2), RL10E_THEVO (P58299), RL10E_UNCMA (Q0W389), 
RL10L_BOVIN (Q2TBW8), RL10L_HUMAN (Q96L21), RL10L_MACFA (Q4R4D3), 
RL10L_MOUSE (P86048), RL10_BOMMA  (O96647), RL10_BOVIN  (Q9XSI3), 
RL10_CAEEL  (Q09533), RL10_CHICK  (Q08200), RL10_DICDI  (Q54J69), 
RL10_DROME  (O61231), RL10_ENCCU  (Q8SR96), RL10_EUGGR  (Q39724), 
RL10_EUPES  (Q9M5M7), RL10_HUMAN  (P27635), RL10_MACFA  (Q4R7Y2), 
RL10_MAIZE  (P45633), RL10_MOUSE  (Q6ZWV3), RL10_PAPAN  (A9CB60), 
RL10_PIG    (Q29195), RL10_PINTA  (O22431), RL10_PONAB  (Q5R931), 
RL10_RAT    (Q6PDV7), RL10_SHEEP  (A8D8X1), RL10_SOLME  (P93847), 
RL10_TETTS  (Q235M8), RL10_TOBAC  (Q40592), RL10_VITRI  (Q9SPB3), 
RL10_YEAST  (P41805)
» More

UniProtKB/Swiss-Prot
False negative sequences
2 sequences

RL10E_CALMQ (A8MDE4), RL10E_METHJ (Q2FLD3)

		
PDB
[Detailed view]
5 PDB

1S1I; 3IZS; 3J21; 3J39; 3J3B

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