Entry: PS01277

General information about the entry

Entry name [info] RIBONUCLEASE_PH
Accession [info] PS01277
Entry type [info] PATTERN
Date [info] NOV-1997 (CREATED); APR-2006 (DATA UPDATE); JUN-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC00983

Name and characterization of the entry

Description [info] Ribonuclease PH signature.
Pattern [info]
[CA]-[DE]-[LIVM](2)-[NQV]-[GTA]-D-[GA]-[SG]-x(2,3)-[TAVLC]-[AT].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_07 which contains 551'705 sequence entries.


Total number of hits 418 in 418 different sequences
Number of true positive hits 418 in 418 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 8
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 98.12 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
418 sequences

EXOS4_CAEBR (A8WQQ5    ), EXOS4_CAEEL (Q17533    ), RNPH_ACAM1  (B0CAB9    ), 
RNPH_ACIAD  (Q6FFX5    ), RNPH_ACIB3  (B7H2J6    ), RNPH_ACIB5  (B7IBN8    ), 
RNPH_ACIBC  (B2I029    ), RNPH_ACIBS  (B0VMP4    ), RNPH_ACIBT  (A3M0U3    ), 
RNPH_ACIBY  (B0V5W8    ), RNPH_ACTP2  (A3MYC7    ), RNPH_ACTP7  (B3GZP5    ), 
RNPH_ACTPJ  (B0BRL3    ), RNPH_ACTSZ  (A6VLF1    ), RNPH_AGRFC  (Q8UIG8    ), 
RNPH_AGRRK  (B9J7T9    ), RNPH_AGRVS  (B9JZG3    ), RNPH_ALCBS  (Q0VT66    ), 
RNPH_ALISL  (B6EPI9    ), RNPH_ALKEH  (Q0A5V1    ), RNPH_ALTMD  (B4S201    ), 
RNPH_ANAD2  (B8J5H5    ), RNPH_ANADE  (Q2IEX1    ), RNPH_ANADF  (A7HFW3    ), 
RNPH_ANASK  (B4UBI2    ), RNPH_ANAVT  (Q3M9Q2    ), RNPH_ANOFW  (B7GH12    ), 
RNPH_AQUAE  (O67069    ), RNPH_AROAE  (Q5P5J6    ), RNPH_AZOC5  (A8HV93    ), 
RNPH_AZOSB  (A1KCM3    ), RNPH_AZOVD  (C1DI48    ), RNPH_BACAA  (C3PA74    ), 
RNPH_BACAC  (C3L7T5    ), RNPH_BACAN  (Q81LA9    ), RNPH_BACC0  (B7JQ74    ), 
RNPH_BACC1  (Q72ZT1    ), RNPH_BACC2  (B7IIZ1    ), RNPH_BACC3  (C1ETS9    ), 
RNPH_BACC4  (B7HEB3    ), RNPH_BACC7  (B7HQP4    ), RNPH_BACCN  (A7GTG6    ), 
RNPH_BACCQ  (B9IZ73    ), RNPH_BACCR  (Q817P3    ), RNPH_BACCZ  (Q633V4    ), 
RNPH_BACHD  (Q9K8D8    ), RNPH_BACHK  (Q6HD42    ), RNPH_BACLD  (Q65GG2    ), 
RNPH_BACP2  (A8FFY6    ), RNPH_BACSK  (Q5WEM3    ), RNPH_BACSU  (P28619    ), 
RNPH_BACVZ  (A7Z7C6    ), RNPH_BACWK  (A9VIV4    ), RNPH_BDEBA  (Q6MJR9    ), 
RNPH_BEII9  (B2IH14    ), RNPH_BIFLO  (Q8G7I0    ), RNPH_BORBR  (Q7WI90    ), 
RNPH_BORPA  (Q7W6C1    ), RNPH_BORPE  (Q7VXY3    ), RNPH_BRADU  (Q89WK4    ), 
RNPH_BRASB  (A5E8I9    ), RNPH_BRASO  (A4YJR3    ), RNPH_BREBN  (C0ZAF8    ), 
RNPH_BRUA1  (B2S8G4    ), RNPH_BRUA2  (Q2YP33    ), RNPH_BRUAB  (Q57FK3    ), 
RNPH_BRUC2  (A9M7B8    ), RNPH_BRUMB  (C0RGM7    ), RNPH_BRUME  (Q8YEV2    ), 
RNPH_BRUO2  (A5VNA8    ), RNPH_BRUSI  (B0CJ32    ), RNPH_BRUSU  (Q8G2Y5    ), 
RNPH_BURA4  (B1YUN3    ), RNPH_BURCA  (Q1BY75    ), RNPH_BURCC  (B1JXM2    ), 
RNPH_BURCH  (A0K5H3    ), RNPH_BURCJ  (B4EBP8    ), RNPH_BURCM  (Q0BHF7    ), 
RNPH_BURL3  (Q39IL4    ), RNPH_BURM1  (A9AEQ7    ), RNPH_BURM7  (A3MML4    ), 
RNPH_BURM9  (A2S9I2    ), RNPH_BURMA  (Q62HZ8    ), RNPH_BURP0  (A3NY37    ), 
RNPH_BURP6  (A3NC95    ), RNPH_BURPS  (Q63RV5    ), RNPH_BURTA  (Q2SY74    ), 
RNPH_BURVG  (A4JCC2    ), RNPH_BURXL  (Q13V47    ), RNPH_CALBD  (B9MQJ8    ), 
RNPH_CALS4  (Q8RC30    ), RNPH_CALS8  (A4XI64    ), RNPH_CARHZ  (Q3AFA0    ), 
RNPH_CAUCN  (B8GXP2    ), RNPH_CAUCR  (P0CAW5    ), RNPH_CAUSK  (B0T369    ), 
RNPH_CELJU  (B3PGE8    ), RNPH_CHESB  (Q11B42    ), RNPH_CHRVO  (Q7MBD4    ), 
RNPH_CITK8  (A8ARN1    ), RNPH_CLOBA  (B2UZ31    ), RNPH_CLOBB  (B2TJ05    ), 
RNPH_CLOCE  (B8I1A8    ), RNPH_CLOK1  (B9DWL2    ), RNPH_CLOK5  (A5N2V9    ), 
RNPH_CLOP1  (Q0TN64    ), RNPH_CLOPE  (Q8XI67    ), RNPH_CLOPS  (Q0SQU1    ), 
RNPH_COLP3  (Q48AN3    ), RNPH_CORDI  (Q6NFN6    ), RNPH_COREF  (Q8FMU8    ), 
RNPH_CORGB  (A4QGQ6    ), RNPH_CORGL  (Q8NMR4    ), RNPH_CORK4  (C4LJY5    ), 
RNPH_COXBN  (A9KGR9    ), RNPH_COXBR  (A9NB33    ), RNPH_COXBU  (Q83EL9    ), 
RNPH_CUPMC  (Q1LQ38    ), RNPH_CUPNH  (Q0KD27    ), RNPH_CUPTR  (B3R3N0    ), 
RNPH_CYAA5  (B1WUL8    ), RNPH_CYAP4  (B8HPC6    ), RNPH_DECAR  (Q479A2    ), 
RNPH_DEHM1  (Q3Z6Z8    ), RNPH_DEHMB  (A5FQ49    ), RNPH_DEHMC  (Q3ZYH8    ), 
RNPH_DEIRA  (Q9RU11    ), RNPH_DESAP  (B1I4W9    ), RNPH_DESPS  (Q6ANS2    ), 
RNPH_DESRM  (A4J7Y7    ), RNPH_DICNV  (A5EV74    ), RNPH_DICTD  (B8E0G7    ), 
RNPH_DINSH  (A8LPD1    ), RNPH_ECO24  (A7ZTJ4    ), RNPH_ECO27  (B7UM50    ), 
RNPH_ECO57  (P66680    ), RNPH_ECO5E  (B5YWE1    ), RNPH_ECOBW  (P0CG18    ), 
RNPH_ECOHS  (A8A6A5    ), RNPH_ECOK1  (A1AHH4    ), RNPH_ECOL5  (Q0TBG6    ), 
RNPH_ECOL6  (P66679    ), RNPH_ECOLC  (B1IYV7    ), RNPH_ECOLI  (P0CG19    ), 
RNPH_ECOSE  (B6I3M0    ), RNPH_ECOSM  (B1LK80    ), RNPH_EDWI9  (C5B9C9    ), 
RNPH_ENT38  (A4W506    ), RNPH_ERWT9  (B2VF76    ), RNPH_ERYLH  (Q2NAJ7    ), 
RNPH_EXIS2  (B1YJW6    ), RNPH_FRAP2  (B0U040    ), RNPH_FRAT1  (Q14HY4    ), 
RNPH_FRATF  (A7NA52    ), RNPH_FRATH  (Q2A562    ), RNPH_FRATM  (B2SF43    ), 
RNPH_FRATN  (A0Q4X5    ), RNPH_FRATO  (Q0BNH8    ), RNPH_FRATT  (Q5NGI2    ), 
RNPH_FRATW  (A4IYU1    ), RNPH_GEODF  (B9M3E3    ), RNPH_GEOKA  (Q5KWI5    ), 
RNPH_GEOLS  (B3E3D2    ), RNPH_GEOMG  (Q39UG9    ), RNPH_GEOSL  (Q74C79    ), 
RNPH_GEOSW  (C5D5M7    ), RNPH_GEOTN  (A4IRI5    ), RNPH_GEOUR  (A5G3S1    ), 
RNPH_HAEDU  (Q7VP10    ), RNPH_HAEI8  (Q4QNR6    ), RNPH_HAEIE  (A5UAL6    ), 
RNPH_HAEIG  (A5UG91    ), RNPH_HAEIN  (P44444    ), RNPH_HAEPS  (B8F6D8    ), 
RNPH_HAES1  (Q0I4U1    ), RNPH_HAHCH  (Q2S8P0    ), RNPH_HALHL  (A1WVN7    ), 
RNPH_HAMD5  (C4K3X0    ), RNPH_HISS2  (B0UWM2    ), RNPH_HYDS0  (B4U8T3    ), 
RNPH_IDILO  (Q5QYL5    ), RNPH_KLEP3  (B5XTF9    ), RNPH_KLEP7  (A6TFN5    ), 
RNPH_LARHH  (C1DCK5    ), RNPH_LEGPA  (Q5X3P0    ), RNPH_LEGPC  (A5IDJ5    ), 
RNPH_LEGPH  (Q5ZTZ6    ), RNPH_LEGPL  (Q5WV28    ), RNPH_LEGPN  (Q9X528    ), 
RNPH_LEIXX  (Q6AEK9    ), RNPH_LISIN  (Q92CH1    ), RNPH_LISMC  (C1L2E3    ), 
RNPH_LISMF  (Q720J1    ), RNPH_LISMH  (B8DHZ4    ), RNPH_LISMO  (Q8Y7N6    ), 
RNPH_LISW6  (A0AHX9    ), RNPH_MANHA  (Q9AES0    ), RNPH_MANSM  (Q65W01    ), 
RNPH_MARHV  (A1TY30    ), RNPH_MARMM  (Q0AKA6    ), RNPH_MARMS  (A6W3H7    ), 
RNPH_METC4  (B7L092    ), RNPH_METCA  (Q602N9    ), RNPH_METEP  (A9VZR7    ), 
RNPH_METFK  (Q1GXA4    ), RNPH_METNO  (B8IFR7    ), RNPH_METPB  (B1ZJ73    ), 
RNPH_METRJ  (B1M4N1    ), RNPH_METS4  (B0UP55    ), RNPH_METSB  (B8ERN7    ), 
RNPH_MOOTA  (Q2RL40    ), RNPH_MYCA1  (A0QD04    ), RNPH_MYCA9  (B1MLZ3    ), 
RNPH_MYCBO  (Q7U076    ), RNPH_MYCBP  (A1KID0    ), RNPH_MYCBT  (C1AMY5    ), 
RNPH_MYCGI  (A4T8F7    ), RNPH_MYCLB  (B8ZR59    ), RNPH_MYCLE  (P37939    ), 
RNPH_MYCPA  (Q73X87    ), RNPH_MYCS2  (A0R1W8    ), RNPH_MYCSJ  (A3Q379    ), 
RNPH_MYCSK  (A1UJV2    ), RNPH_MYCSS  (Q1B585    ), RNPH_MYCTA  (A5U240    ), 
RNPH_MYCTO  (P9WGZ6    ), RNPH_MYCTU  (P9WGZ7    ), RNPH_MYCUA  (A0PUG0    ), 
RNPH_MYCVP  (A1TD14    ), RNPH_MYXXD  (Q1DAT4    ), RNPH_NEIG1  (Q5F840    ), 
RNPH_NEIG2  (B4RL28    ), RNPH_NEIM0  (A9M0T5    ), RNPH_NEIMA  (Q9JTN2    ), 
RNPH_NEIMB  (Q9JYN5    ), RNPH_NEIMF  (A1KUT9    ), RNPH_NITEC  (Q0AJ79    ), 
RNPH_NITEU  (Q82XJ4    ), RNPH_NITHX  (Q1QRU5    ), RNPH_NITMU  (Q2YCZ6    ), 
RNPH_NITOC  (Q3J8F0    ), RNPH_NITWN  (Q3SW80    ), RNPH_NOCFA  (Q5Z0V1    ), 
RNPH_NOCSJ  (A1SGA2    ), RNPH_NOSP7  (B2J9Q1    ), RNPH_NOSS1  (Q8Z0M2    ), 
RNPH_OCEIH  (Q8EPJ5    ), RNPH_OCHA4  (A6WVA9    ), RNPH_OLICO  (B6JCH9    ), 
RNPH_PARL1  (A7HZ45    ), RNPH_PARP8  (B2JEI0    ), RNPH_PARPJ  (B2T6B5    ), 
RNPH_PASMU  (Q9CJW5    ), RNPH_PECAS  (Q6DAW2    ), RNPH_PECCP  (C6DIC7    ), 
RNPH_PERMH  (C0QTN9    ), RNPH_PHEZH  (B4RC87    ), RNPH_PHOLL  (Q7MAX2    ), 
RNPH_PHOPR  (Q6LVN8    ), RNPH_PROAC  (Q6A759    ), RNPH_PROMH  (B4F0W3    ), 
RNPH_PROMM  (Q7V4V8    ), RNPH_PSEA6  (Q15MV7    ), RNPH_PSEA7  (A6VEE1    ), 
RNPH_PSEA8  (B7V5M5    ), RNPH_PSEAB  (Q02E28    ), RNPH_PSEAE  (P50597    ), 
RNPH_PSEF5  (Q4K3R6    ), RNPH_PSEFS  (C3K479    ), RNPH_PSEHT  (Q3IJI0    ), 
RNPH_PSEMY  (A4Y0L7    ), RNPH_PSEP1  (A5WB10    ), RNPH_PSEPF  (Q3K4M0    ), 
RNPH_PSEPG  (B0KQ94    ), RNPH_PSEPK  (Q88C89    ), RNPH_PSEPW  (B1J4L4    ), 
RNPH_PSESM  (Q88BE0    ), RNPH_PSEU2  (Q4ZZY6    ), RNPH_PSEU5  (A4VGR8    ), 
RNPH_PSYA2  (Q4FQJ5    ), RNPH_PSYCK  (Q1Q8S2    ), RNPH_PSYIN  (A1T097    ), 
RNPH_PSYWF  (A5WHJ0    ), RNPH_RALPJ  (B2U8D8    ), RNPH_RALSO  (Q8XXF5    ), 
RNPH_RHIE6  (B3PZA2    ), RNPH_RHIEC  (Q2KDA1    ), RNPH_RHIL3  (Q1MMD1    ), 
RNPH_RHILO  (Q98DN6    ), RNPH_RHILW  (B5ZMW8    ), RNPH_RHIME  (Q92SK2    ), 
RNPH_RHOBA  (Q7URE2    ), RNPH_RHOE4  (C1A1V2    ), RNPH_RHOP2  (Q2J324    ), 
RNPH_RHOPA  (Q6NCY8    ), RNPH_RHOPB  (Q21CI6    ), RNPH_RHOPS  (Q13E56    ), 
RNPH_RHOPT  (B3Q968    ), RNPH_RHORT  (Q2RN60    ), RNPH_RHOS1  (A3PNR8    ), 
RNPH_RHOS5  (A4WVY1    ), RNPH_RHOSK  (B9KPU4    ), RNPH_RICAE  (C3PP75    ), 
RNPH_RICAH  (A8GPB9    ), RNPH_RICB8  (A8GW25    ), RNPH_RICBR  (Q1RIX6    ), 
RNPH_RICCK  (A8EY33    ), RNPH_RICCN  (Q92GZ7    ), RNPH_RICFE  (Q4UJN4    ), 
RNPH_RICPR  (Q9ZCT5    ), RNPH_RICPU  (C4K2U2    ), RNPH_RICRO  (B0BUM3    ), 
RNPH_RICRS  (A8GT33    ), RNPH_ROSDO  (Q16D02    ), RNPH_RUEPO  (Q5LWF6    ), 
RNPH_RUEST  (Q1GCL2    ), RNPH_SACD2  (Q21EE1    ), RNPH_SACEN  (A4F913    ), 
RNPH_SALA4  (B5EXE7    ), RNPH_SALAI  (A8M4I1    ), RNPH_SALAR  (A9MKN2    ), 
RNPH_SALCH  (Q57I99    ), RNPH_SALDC  (B5FM66    ), RNPH_SALEP  (B5R5G7    ), 
RNPH_SALG2  (B5RG80    ), RNPH_SALHS  (B4T9Y6    ), RNPH_SALNS  (B4SXE4    ), 
RNPH_SALPA  (Q5PC25    ), RNPH_SALPK  (B5BI17    ), RNPH_SALSV  (B4TZY4    ), 
RNPH_SALTI  (P0A2C4    ), RNPH_SALTO  (A4X3X5    ), RNPH_SALTY  (P0A2C3    ), 
RNPH_SERP5  (A8GLF0    ), RNPH_SHEAM  (A1S2C5    ), RNPH_SHEB2  (B8E4I8    ), 
RNPH_SHEB5  (A3CZI9    ), RNPH_SHEB8  (A6WI99    ), RNPH_SHEB9  (A9KXZ7    ), 
RNPH_SHEDO  (Q12SG2    ), RNPH_SHEFN  (Q07WF3    ), RNPH_SHEHH  (B0TQK4    ), 
RNPH_SHELP  (A3QIQ6    ), RNPH_SHEON  (Q8E9L4    ), RNPH_SHEPA  (A8H9B7    ), 
RNPH_SHEPC  (A4Y2K5    ), RNPH_SHEPW  (B8CM22    ), RNPH_SHESA  (A0L1S6    ), 
RNPH_SHESH  (A8FQ68    ), RNPH_SHESM  (Q0HE49    ), RNPH_SHESR  (Q0HZV0    ), 
RNPH_SHESW  (A1RET8    ), RNPH_SHEWM  (B1KL12    ), RNPH_SHIB3  (B2TTV7    ), 
RNPH_SHIBS  (Q31UY3    ), RNPH_SHIDS  (Q329L3    ), RNPH_SHIF8  (Q0SYH0    ), 
RNPH_SHIFL  (Q83PN2    ), RNPH_SHISS  (Q3YW05    ), RNPH_SINFN  (C3MEJ1    ), 
RNPH_SINMW  (A6U5E0    ), RNPH_SODGM  (Q2NQT7    ), RNPH_SOLUE  (Q01NZ9    ), 
RNPH_SPHAL  (Q1GWJ5    ), RNPH_SPHWW  (A5V3R9    ), RNPH_STRAW  (Q82D17    ), 
RNPH_STRCO  (Q9S2H7    ), RNPH_STRGG  (B1VVV6    ), RNPH_STRM5  (B4SU06    ), 
RNPH_STRMK  (B2FT17    ), RNPH_SULSY  (B2V890    ), RNPH_SYMTH  (Q67SL5    ), 
RNPH_SYNAS  (Q2LTS3    ), RNPH_SYNE7  (Q31PB6    ), RNPH_SYNJA  (Q2JRJ9    ), 
RNPH_SYNJB  (Q2JKT3    ), RNPH_SYNP6  (Q5N4V3    ), RNPH_SYNPX  (Q7U9I1    ), 
RNPH_SYNSC  (Q3AMY6    ), RNPH_SYNWW  (Q0AZR6    ), RNPH_TERTT  (C5BLF9    ), 
RNPH_THEEB  (Q8DLA4    ), RNPH_THEP3  (B0KBM5    ), RNPH_THEPX  (B0K3T4    ), 
RNPH_THISH  (B8GPB2    ), RNPH_TOLAT  (C4L818    ), RNPH_TROW8  (Q83HF6    ), 
RNPH_TROWT  (Q83FT1    ), RNPH_VIBCH  (Q9KVD6    ), RNPH_VIBF1  (Q5E8P0    ), 
RNPH_VIBFM  (B5FFE2    ), RNPH_VIBPA  (Q87T93    ), RNPH_VIBTL  (B7VHJ7    ), 
RNPH_VIBVU  (Q8DDX4    ), RNPH_VIBVY  (Q7MPT3    ), RNPH_XANAC  (Q8PH63    ), 
RNPH_XANC5  (Q3BPR8    ), RNPH_XANC8  (Q4UY39    ), RNPH_XANCB  (B0RP96    ), 
RNPH_XANCP  (Q8P5T5    ), RNPH_XANOM  (Q2P6N2    ), RNPH_XANOP  (B2SLL1    ), 
RNPH_XANP2  (A7IID4    ), RNPH_XYLF2  (B2IA38    ), RNPH_XYLFA  (Q9PD74    ), 
RNPH_XYLFM  (B0U6W7    ), RNPH_XYLFT  (Q87DG3    ), RNPH_YERE8  (A1JHW7    ), 
RNPH_YERP3  (A7FCS9    ), RNPH_YERPA  (Q1C262    ), RNPH_YERPB  (B2JYM8    ), 
RNPH_YERPE  (Q8ZJP8    ), RNPH_YERPG  (A9R668    ), RNPH_YERPN  (Q1CCZ7    ), 
RNPH_YERPP  (A4TSE2    ), RNPH_YERPS  (Q66GE1    ), RNPH_YERPY  (B1JQX8    ), 
RNPH_ZYMMO  (Q5NRL6    )
» more

UniProtKB/Swiss-Prot
False negative sequences
8 sequences

CER7L_ARATH (Q9LDM2    ), CER7_ARATH  (Q9M209    ), MTR3_SCHPO  (Q9P7R3    ), 
RNPH_CYAP7  (B7KB81    ), RNPH_DICT6  (B5YEU4    ), RNPH_FRASC  (Q2JEN8    ), 
RNPH_FRASN  (A8L766    ), RNPH_THEYD  (B5YFY8    )
» more

PDB
[Detailed view]
11 PDB

1OYP; 1OYR; 1OYS; 1R6L; 1R6M; 1UDN; 1UDO; 1UDQ; 1UDS; 3B4T; 3DD6

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission