Entry: PS01326

General information about the entry

Entry name [info] DAP_EPIMERASE
Accession [info] PS01326
Entry type [info] PATTERN
Date [info] JUL-1999 (CREATED); APR-2006 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC01029
Associated ProRule [info] PRU10125

Name and characterization of the entry

Description [info] Diaminopimelate epimerase signature.
Pattern [info]
N-x-[DN]-[GS]-[SENGFT]-x(4)-C-[GI]-N-[GA]-x-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 412 in 412 different sequences
Number of true positive hits 412 in 412 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.63 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 7
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
412 sequences

DAPF2_NOSS1 (Q8YVD0    ), DAPF_ACAM1  (B0C312    ), DAPF_ACIAC  (A1TKA9    ), 
DAPF_ACIAD  (Q6F950    ), DAPF_ACIB3  (B7GY71    ), DAPF_ACIB5  (B7I5Y5    ), 
DAPF_ACIBC  (B2HX82    ), DAPF_ACIBS  (B0VT30    ), DAPF_ACIBT  (A3M804    ), 
DAPF_ACIBY  (B0VDN4    ), DAPF_ACIC1  (A0LUZ5    ), DAPF_ACICJ  (A5G1F7    ), 
DAPF_ACIET  (B9MFT0    ), DAPF_ACTP2  (A3N2H9    ), DAPF_ACTP7  (B3GYL3    ), 
DAPF_ACTPJ  (B0BRC5    ), DAPF_ACTSZ  (A6VQR8    ), DAPF_AERHH  (A0KFI1    ), 
DAPF_AERS4  (A4SRW9    ), DAPF_AGARV  (C4Z900    ), DAPF_AGRFC  (Q8UC03    ), 
DAPF_AGRRK  (B9JCL3    ), DAPF_AGRVS  (B9JUB9    ), DAPF_ALCBS  (Q0VM18    ), 
DAPF_ALISL  (B6EP85    ), DAPF_ALKEH  (Q0ACL9    ), DAPF_ALKMQ  (A6TRX5    ), 
DAPF_ALKOO  (A8MH77    ), DAPF_AQUAE  (O67693    ), DAPF_ARATH  (Q9LFG2    ), 
DAPF_ARCFU  (O29511    ), DAPF_AROAE  (Q5P2V2    ), DAPF_AZOPC  (B6YS11    ), 
DAPF_AZOSB  (A1K306    ), DAPF_AZOVD  (C1DJ56    ), DAPF_BACAA  (C3PDH0    ), 
DAPF_BACAC  (C3LC72    ), DAPF_BACAH  (A0RKC7    ), DAPF_BACAN  (Q81XR2    ), 
DAPF_BACC0  (B7JDJ2    ), DAPF_BACC1  (Q72YE7    ), DAPF_BACC2  (B7IMV5    ), 
DAPF_BACC3  (C1EX98    ), DAPF_BACC4  (B7HBI0    ), DAPF_BACC7  (B7HUS8    ), 
DAPF_BACCN  (A7GUE1    ), DAPF_BACCR  (Q816D1    ), DAPF_BACCZ  (Q632C7    ), 
DAPF_BACFR  (Q64SY7    ), DAPF_BACHD  (Q9K7F0    ), DAPF_BACHK  (Q6HBW8    ), 
DAPF_BACLD  (Q65FD6    ), DAPF_BACMF  (A7Z8D3    ), DAPF_BACP2  (A8FH15    ), 
DAPF_BACSU  (O32114    ), DAPF_BACTN  (Q8AAB7    ), DAPF_BACV8  (A6L7E5    ), 
DAPF_BACWK  (A9VN01    ), DAPF_BARBK  (A1UQV5    ), DAPF_BARHE  (Q6G1L7    ), 
DAPF_BARQU  (Q6FYC7    ), DAPF_BART1  (A9IZW1    ), DAPF_BAUCH  (Q1LTX0    ), 
DAPF_BEII9  (B2IEM1    ), DAPF_BLOFL  (Q7VRM5    ), DAPF_BLOPB  (Q491Z7    ), 
DAPF_BRADU  (Q89X45    ), DAPF_BRAHW  (C0QZX1    ), DAPF_BRASB  (A5E915    ), 
DAPF_BRASO  (A4YKA5    ), DAPF_BRUA1  (B2S885    ), DAPF_BRUA2  (Q2YLR4    ), 
DAPF_BRUAB  (Q57AW6    ), DAPF_BRUC2  (A9M8R8    ), DAPF_BRUMB  (C0RFH7    ), 
DAPF_BRUME  (Q8YJF0    ), DAPF_BRUO2  (A5VSQ7    ), DAPF_BRUSI  (B0CIT6    ), 
DAPF_BRUSU  (Q8FYF0    ), DAPF_BUCA5  (B8D8F1    ), DAPF_BUCAI  (P57649    ), 
DAPF_BUCAP  (Q8K901    ), DAPF_BUCAT  (B8D8A8    ), DAPF_BUCBP  (P59582    ), 
DAPF_BURCM  (Q0BAY6    ), DAPF_BURM7  (A3MRQ6    ), DAPF_BURM9  (A2S862    ), 
DAPF_BURMA  (Q62EZ3    ), DAPF_BURMS  (A1V7L3    ), DAPF_BURP0  (A3NQ71    ), 
DAPF_BURP6  (A3N4H9    ), DAPF_BURP8  (B2JJY4    ), DAPF_BURPP  (B2T1P5    ), 
DAPF_BURPS  (Q63YH7    ), DAPF_BURTA  (Q2T269    ), DAPF_BURVG  (A4JIQ6    ), 
DAPF_BURXL  (Q146W2    ), DAPF_CALS4  (Q8R9S4    ), DAPF_CAMJ8  (A8FNJ1    ), 
DAPF_CAMJD  (A7H5P5    ), DAPF_CAMJE  (Q9PMD8    ), DAPF_CAMJJ  (A1W1D0    ), 
DAPF_CAMJR  (Q5HSQ5    ), DAPF_CAMLR  (B9KED6    ), DAPF_CARHZ  (Q3AC09    ), 
DAPF_CAUCN  (B8GVW2    ), DAPF_CAUCR  (Q9A280    ), DAPF_CAUSK  (B0T542    ), 
DAPF_CELJU  (B3PEI8    ), DAPF_CHESB  (Q11CW3    ), DAPF_CHLMU  (Q9PJW2    ), 
DAPF_CHLPN  (Q9Z833    ), DAPF_CHLT2  (B0B802    ), DAPF_CHLTA  (Q3KLS0    ), 
DAPF_CHLTB  (B0BC67    ), DAPF_CHLTE  (Q8KAX9    ), DAPF_CHLTR  (O84437    ), 
DAPF_CHRSD  (Q1QSV1    ), DAPF_CHRVO  (Q7NV18    ), DAPF_CLAM3  (A5CSL3    ), 
DAPF_CLAMS  (B0RHB0    ), DAPF_CLOAB  (Q97FV2    ), DAPF_CLOPE  (Q46185    ), 
DAPF_CLOTH  (A3DK16    ), DAPF_COLP3  (Q48AR8    ), DAPF_CORA7  (C3PGX6    ), 
DAPF_COREF  (Q8FPE1    ), DAPF_CORGB  (A4QEV1    ), DAPF_CORGL  (Q8NP73    ), 
DAPF_COXB1  (B6J630    ), DAPF_COXB2  (B6J395    ), DAPF_COXBN  (A9KGY8    ), 
DAPF_COXBR  (A9N9J6    ), DAPF_COXBU  (Q83AD4    ), DAPF_CROS8  (A7MQK2    ), 
DAPF_CUPMC  (Q1LS37    ), DAPF_CUPNH  (Q0KF42    ), DAPF_CUPPJ  (Q476V3    ), 
DAPF_CUPTR  (B2AGE5    ), DAPF_CYAP4  (B8HU20    ), DAPF_CYAP7  (B7KH06    ), 
DAPF_CYAP8  (B7K1E7    ), DAPF_DECAR  (Q47JN0    ), DAPF_DESAH  (C0QAP3    ), 
DAPF_DESAP  (B1I545    ), DAPF_DESDA  (B8IZX7    ), DAPF_DESHD  (B8FSD4    ), 
DAPF_DESRM  (A4J568    ), DAPF_ECO24  (A7ZU14    ), DAPF_ECO27  (B7UNC6    ), 
DAPF_ECO45  (B7MH73    ), DAPF_ECO55  (B7L969    ), DAPF_ECO57  (P0A6K2    ), 
DAPF_ECO5E  (B5YY56    ), DAPF_ECO7I  (B7NTD3    ), DAPF_ECO81  (B7MR29    ), 
DAPF_ECO8A  (B7M611    ), DAPF_ECOBW  (C4ZZ73    ), DAPF_ECODH  (B1XAH6    ), 
DAPF_ECOHS  (A8A6R7    ), DAPF_ECOL5  (Q0TAR6    ), DAPF_ECOL6  (Q8FBN6    ), 
DAPF_ECOLC  (B1IW95    ), DAPF_ECOLI  (P0A6K1    ), DAPF_ECOLU  (B7NFB1    ), 
DAPF_ECOSM  (B1LLY0    ), DAPF_EDWI9  (C5BBD4    ), DAPF_ELUMP  (B2KDH2    ), 
DAPF_ENT38  (A4WG08    ), DAPF_ENTFA  (Q838I3    ), DAPF_ERWT9  (B2VI49    ), 
DAPF_ERYLH  (Q2NBR6    ), DAPF_ESCF3  (B7LU47    ), DAPF_FLAPJ  (A6GYX5    ), 
DAPF_GEOKA  (Q5KVP4    ), DAPF_GEOSW  (C5D729    ), DAPF_GEOTN  (A4ISE8    ), 
DAPF_GLUOX  (Q5FQZ4    ), DAPF_GRABC  (Q0BS04    ), DAPF_HAEDU  (Q7VPN0    ), 
DAPF_HAEI8  (Q4QME8    ), DAPF_HAEIE  (A5UDX5    ), DAPF_HAEIG  (A5UHQ4    ), 
DAPF_HAEIN  (P44859    ), DAPF_HAEPS  (B8F878    ), DAPF_HAES1  (Q0I572    ), 
DAPF_HAHCH  (Q2SQ64    ), DAPF_HALHL  (A1WWB3    ), DAPF_HALOH  (B8CX90    ), 
DAPF_HELMI  (B0TGR9    ), DAPF_HELP2  (B6JLE8    ), DAPF_HELPG  (B5Z6T7    ), 
DAPF_HELPH  (Q1CTW0    ), DAPF_HELPJ  (Q9ZLR5    ), DAPF_HELPS  (B2UTR2    ), 
DAPF_HELPY  (O25290    ), DAPF_HERAR  (A4G980    ), DAPF_HISS2  (B0UWU6    ), 
DAPF_HYDS0  (B4U9P0    ), DAPF_IDILO  (Q5QUS6    ), DAPF_LACPL  (Q88V90    ), 
DAPF_LACS1  (Q1WTU5    ), DAPF_LARHH  (C1D8Q0    ), DAPF_LEIXX  (Q6AE05    ), 
DAPF_LEPBA  (B0SC36    ), DAPF_LEPBJ  (Q04W97    ), DAPF_LEPBL  (Q04X60    ), 
DAPF_LEPIC  (Q72W63    ), DAPF_LEPIN  (Q8F9V5    ), DAPF_LISIN  (Q929Z7    ), 
DAPF_LISMC  (C1KWW2    ), DAPF_LISMF  (Q71Y02    ), DAPF_LISMH  (B8DBR3    ), 
DAPF_LISMO  (Q8Y5N9    ), DAPF_LISW6  (A0AKC4    ), DAPF_MAGMM  (A0LE31    ), 
DAPF_MANSM  (Q65RL9    ), DAPF_META3  (A6UTH4    ), DAPF_METAR  (Q0W3B6    ), 
DAPF_METC4  (B7KQM2    ), DAPF_METEP  (A9W6A5    ), DAPF_METJA  (Q58519    ), 
DAPF_METKA  (Q8TY71    ), DAPF_METM5  (A4FXV0    ), DAPF_METM6  (A9AB27    ), 
DAPF_METM7  (A6VFK8    ), DAPF_METMP  (Q6LYS1    ), DAPF_METNO  (B8I9H6    ), 
DAPF_METPB  (B1ZDT1    ), DAPF_METPP  (A2SKV9    ), DAPF_METS4  (B0UCI8    ), 
DAPF_METSB  (B8EM14    ), DAPF_METTH  (O27389    ), DAPF_MICAN  (B0JJ58    ), 
DAPF_MOOTA  (Q2RK34    ), DAPF_MYCA1  (A0QIQ8    ), DAPF_MYCA9  (B1MD00    ), 
DAPF_MYCBO  (P63898    ), DAPF_MYCBP  (A1KM64    ), DAPF_MYCBT  (C1AFI5    ), 
DAPF_MYCGI  (A4TCN3    ), DAPF_MYCLB  (B8ZQU1    ), DAPF_MYCLE  (P46814    ), 
DAPF_MYCMM  (B2HL16    ), DAPF_MYCPA  (Q73W21    ), DAPF_MYCS2  (A0QVY0    ), 
DAPF_MYCSJ  (A3PYF9    ), DAPF_MYCSK  (A1UEZ9    ), DAPF_MYCTA  (A5U678    ), 
DAPF_MYCTO  (P9WP18    ), DAPF_MYCTU  (P9WP19    ), DAPF_MYCUA  (A0PT80    ), 
DAPF_MYCVP  (A1T7U8    ), DAPF_NATTJ  (B2A663    ), DAPF_NEIMA  (Q9JV69    ), 
DAPF_NEIMB  (Q9K060    ), DAPF_NITEC  (Q0AIP0    ), DAPF_NITEU  (Q82U84    ), 
DAPF_NITHX  (Q1QHJ3    ), DAPF_NITMU  (Q2Y5Z0    ), DAPF_NITOC  (Q3JEA2    ), 
DAPF_NITSB  (A6Q160    ), DAPF_NOSP7  (B2J3A7    ), DAPF_OCEIH  (Q8ENX2    ), 
DAPF_OCHA4  (A6WXE4    ), DAPF_OLICO  (B6JAP3    ), DAPF_ORYSI  (A2ZLS4    ), 
DAPF_ORYSJ  (Q2QNF7    ), DAPF_PARD8  (A6L8U3    ), DAPF_PASMU  (P57962    ), 
DAPF_PECAS  (Q6CZG8    ), DAPF_PECCP  (C6DHB7    ), DAPF_PELTS  (A5D193    ), 
DAPF_PELUB  (Q4FP10    ), DAPF_PHEZH  (B4RCE2    ), DAPF_PHOLL  (Q7MYN5    ), 
DAPF_PHOPR  (Q6LLN5    ), DAPF_PROM1  (A2C243    ), DAPF_PROMH  (B4F1X7    ), 
DAPF_PROMM  (Q7V7M5    ), DAPF_PROMT  (Q46L14    ), DAPF_PSE14  (Q48C02    ), 
DAPF_PSEA6  (Q15NG5    ), DAPF_PSEA7  (A6VE52    ), DAPF_PSEA8  (B7V5G9    ), 
DAPF_PSEAB  (Q02E84    ), DAPF_PSEAE  (Q51564    ), DAPF_PSEE4  (Q1I303    ), 
DAPF_PSEFL  (O05322    ), DAPF_PSEHT  (Q3IEW3    ), DAPF_PSEMY  (A4XNX4    ), 
DAPF_PSEPF  (Q3K4R8    ), DAPF_PSEPG  (B0KQ41    ), DAPF_PSEPK  (Q88CF3    ), 
DAPF_PSEPW  (B1J1W0    ), DAPF_PSESM  (Q88B09    ), DAPF_PSEU2  (Q500B6    ), 
DAPF_PSEU5  (A4VGW5    ), DAPF_PSYA2  (Q4FV85    ), DAPF_PSYCK  (Q1QE99    ), 
DAPF_PSYIN  (A1SQZ9    ), DAPF_PSYWF  (A5WCB3    ), DAPF_RALPJ  (B2UD25    ), 
DAPF_RALSO  (Q8Y344    ), DAPF_RHIEC  (Q2K386    ), DAPF_RHILO  (Q98EB6    ), 
DAPF_RHILW  (B5ZTH4    ), DAPF_RHIME  (Q92L46    ), DAPF_RHOCS  (B6IP82    ), 
DAPF_RHOE4  (C0ZYN8    ), DAPF_RHOJR  (Q0S1N7    ), DAPF_RHOOB  (C1B393    ), 
DAPF_RHOP2  (Q2J390    ), DAPF_RHOP5  (Q07UV4    ), DAPF_RHOPA  (Q6ND59    ), 
DAPF_RHOPB  (Q21CU6    ), DAPF_RHOPS  (Q13DT7    ), DAPF_RHOPT  (B3Q862    ), 
DAPF_RHOS4  (Q3IZB6    ), DAPF_RICAE  (C3PNE1    ), DAPF_RICAH  (A8GND7    ), 
DAPF_RICB8  (A8GWH4    ), DAPF_RICBR  (Q1RIT1    ), DAPF_RICCK  (A8EZ08    ), 
DAPF_RICCN  (Q92I41    ), DAPF_RICFE  (Q4ULS7    ), DAPF_RICM5  (A8F1I9    ), 
DAPF_RICPR  (Q9ZDB7    ), DAPF_RICPU  (C4K2A3    ), DAPF_RICRO  (B0BXH3    ), 
DAPF_RICRS  (A8GS10    ), DAPF_RICTY  (Q68WW4    ), DAPF_SACD2  (Q21P78    ), 
DAPF_SALA4  (B5EZS3    ), DAPF_SALDC  (B5FNU5    ), DAPF_SALHS  (B4TB37    ), 
DAPF_SALNS  (B4SZ51    ), DAPF_SALPA  (Q5PKM6    ), DAPF_SALPB  (A9MY70    ), 
DAPF_SALPK  (B5BIV6    ), DAPF_SALSV  (B4TNV9    ), DAPF_SALTI  (P0A1F3    ), 
DAPF_SALTY  (P0A1F2    ), DAPF_SERP5  (A8G852    ), DAPF_SHEAM  (A1SAP5    ), 
DAPF_SHEB2  (B8E690    ), DAPF_SHEB5  (A3D9Q0    ), DAPF_SHEB8  (A6WTF5    ), 
DAPF_SHEB9  (A9L5F5    ), DAPF_SHEDO  (Q12S90    ), DAPF_SHEFN  (Q088K8    ), 
DAPF_SHELP  (A3Q9P7    ), DAPF_SHEON  (Q8E9H5    ), DAPF_SHEPC  (A4YBF7    ), 
DAPF_SHESA  (A0KS65    ), DAPF_SHESH  (A8G0W0    ), DAPF_SHESM  (Q0HN95    ), 
DAPF_SHESR  (Q0HQJ2    ), DAPF_SHESW  (A1RPD2    ), DAPF_SHEWM  (B1KQD0    ), 
DAPF_SHIB3  (B2TUW5    ), DAPF_SHIF8  (Q0SZ00    ), DAPF_SODGM  (Q2NQF4    ), 
DAPF_SPHAL  (Q1GPI7    ), DAPF_SPHWW  (A5VAG4    ), DAPF_STRCO  (O69969    ), 
DAPF_SYNE7  (Q31LW2    ), DAPF_SYNJA  (Q2JUV6    ), DAPF_SYNJB  (Q2JLR0    ), 
DAPF_SYNP2  (B1XP39    ), DAPF_SYNP6  (Q5N013    ), DAPF_SYNY3  (P74667    ), 
DAPF_TERTT  (C5BUL6    ), DAPF_THEEB  (Q8DGM2    ), DAPF_THEFY  (Q47RR3    ), 
DAPF_THISH  (B8GT89    ), DAPF_TOLAT  (C4LDU8    ), DAPF_TRIEI  (Q116P1    ), 
DAPF_VARPS  (C5CND4    ), DAPF_VESOH  (A5CWN5    ), DAPF_VIBC3  (A5F4I6    ), 
DAPF_VIBCB  (A7N0W0    ), DAPF_VIBCH  (Q9KVL6    ), DAPF_VIBF1  (Q5E1W7    ), 
DAPF_VIBPA  (Q87KJ4    ), DAPF_VIBTL  (B7VMD4    ), DAPF_VIBVU  (Q8DD81    ), 
DAPF_VIBVY  (Q7MQC1    ), DAPF_WIGBR  (Q8D2T4    ), DAPF_WOLTR  (Q5GSB8    ), 
DAPF_WOLWR  (C0R4N2    ), DAPF_XANAC  (Q8PPQ1    ), DAPF_XANC5  (Q3BXU3    ), 
DAPF_XANC8  (Q4UYY2    ), DAPF_XANCB  (B0RNK1    ), DAPF_XANCP  (Q8P548    ), 
DAPF_XANOM  (Q2NYV5    ), DAPF_XYLF2  (B2IA16    ), DAPF_XYLFA  (Q9PD98    ), 
DAPF_XYLFM  (B0U6U5    ), DAPF_XYLFT  (Q87DI4    ), DAPF_YERE8  (A1JI90    ), 
DAPF_YERP3  (A7FD74    ), DAPF_YERPA  (Q1CBM6    ), DAPF_YERPB  (B2K072    ), 
DAPF_YERPE  (P46357    ), DAPF_YERPG  (A9R8K5    ), DAPF_YERPN  (Q1CNH8    ), 
DAPF_YERPP  (A4TRA3    ), DAPF_YERPS  (Q66FZ5    ), DAPF_YERPY  (B1JPE1    ), 
DAPF_ZYMMO  (Q5NNL4    )
» more

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

DAPF1_NOSS1 (P54897    ), DAPF_GEMAT  (C1A8U3    ), DAPF_LEGPA  (Q5X822    ), 
DAPF_LEGPC  (A5IHM9    ), DAPF_LEGPH  (Q5ZYK6    ), DAPF_LEGPL  (Q5WZH5    ), 
DAPF_LEPCP  (B1Y6S6    ), DAPF_METTP  (A0B6C1    ), DAPF_RHOFT  (Q21SV0    ), 
DAPF_RUTMC  (A1AWJ5    )
» more

PDB
[Detailed view]
11 PDB

1BWZ; 1GQZ; 2GKE; 2GKJ; 2OTN; 3EJX; 3EKM; 3FVE; 4IJZ; 4IK0; 5HA4

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission