To improve security and privacy, we are moving our web pages and services from HTTP to HTTPS.
To give users of web services time to transition to HTTPS, we will support separate HTTP and HTTPS services until the end of 2017.
From January 2018 most HTTP traffic will be automatically redirected to HTTPS. [more...]
View this page in https
Entry: PS01326

General information about the entry

Entry name [info] DAP_EPIMERASE
Accession [info] PS01326
Entry type [info] PATTERN
Date [info] 01-JUL-1999 CREATED; 01-APR-2006 DATA UPDATE; 27-SEP-2017 INFO UPDATE.
PROSITE Doc. [info] PDOC01029
Associated ProRule [info] PRU10125

Name and characterization of the entry

Description [info] Diaminopimelate epimerase signature.
Pattern [info]
N-x-[DN]-[GS]-[SENGFT]-x(4)-C-[GI]-N-[GA]-x-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2017_09 which contains 555'594 sequence entries.


Total number of hits 412 in 412 different sequences
Number of true positive hits 412 in 412 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 10
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.63 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 7
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
412 sequences

DAPF1_NOSS1 (Q8YVD0    ), DAPF_ACAM1  (B0C312    ), DAPF_ACIAC  (A1TKA9    ), 
DAPF_ACIAD  (Q6F950    ), DAPF_ACIB3  (B7GY71    ), DAPF_ACIB5  (B7I5Y5    ), 
DAPF_ACIBC  (B2HX82    ), DAPF_ACIBS  (B0VT30    ), DAPF_ACIBT  (A3M804    ), 
DAPF_ACIBY  (B0VDN4    ), DAPF_ACIC1  (A0LUZ5    ), DAPF_ACICJ  (A5G1F7    ), 
DAPF_ACIET  (B9MFT0    ), DAPF_ACTP2  (A3N2H9    ), DAPF_ACTP7  (B3GYL3    ), 
DAPF_ACTPJ  (B0BRC5    ), DAPF_ACTSZ  (A6VQR8    ), DAPF_AERHH  (A0KFI1    ), 
DAPF_AERS4  (A4SRW9    ), DAPF_AGARV  (C4Z900    ), DAPF_AGRFC  (Q8UC03    ), 
DAPF_AGRRK  (B9JCL3    ), DAPF_AGRVS  (B9JUB9    ), DAPF_ALCBS  (Q0VM18    ), 
DAPF_ALISL  (B6EP85    ), DAPF_ALKEH  (Q0ACL9    ), DAPF_ALKMQ  (A6TRX5    ), 
DAPF_ALKOO  (A8MH77    ), DAPF_AQUAE  (O67693    ), DAPF_ARATH  (Q9LFG2    ), 
DAPF_ARCFU  (O29511    ), DAPF_AROAE  (Q5P2V2    ), DAPF_AZOPC  (B6YS11    ), 
DAPF_AZOSB  (A1K306    ), DAPF_AZOVD  (C1DJ56    ), DAPF_BACAA  (C3PDH0    ), 
DAPF_BACAC  (C3LC72    ), DAPF_BACAH  (A0RKC7    ), DAPF_BACAN  (Q81XR2    ), 
DAPF_BACC0  (B7JDJ2    ), DAPF_BACC1  (Q72YE7    ), DAPF_BACC2  (B7IMV5    ), 
DAPF_BACC3  (C1EX98    ), DAPF_BACC4  (B7HBI0    ), DAPF_BACC7  (B7HUS8    ), 
DAPF_BACCN  (A7GUE1    ), DAPF_BACCR  (Q816D1    ), DAPF_BACCZ  (Q632C7    ), 
DAPF_BACFR  (Q64SY7    ), DAPF_BACHD  (Q9K7F0    ), DAPF_BACHK  (Q6HBW8    ), 
DAPF_BACLD  (Q65FD6    ), DAPF_BACP2  (A8FH15    ), DAPF_BACSU  (O32114    ), 
DAPF_BACTN  (Q8AAB7    ), DAPF_BACV8  (A6L7E5    ), DAPF_BACVZ  (A7Z8D3    ), 
DAPF_BACWK  (A9VN01    ), DAPF_BARBK  (A1UQV5    ), DAPF_BARHE  (Q6G1L7    ), 
DAPF_BARQU  (Q6FYC7    ), DAPF_BART1  (A9IZW1    ), DAPF_BAUCH  (Q1LTX0    ), 
DAPF_BEII9  (B2IEM1    ), DAPF_BLOFL  (Q7VRM5    ), DAPF_BLOPB  (Q491Z7    ), 
DAPF_BRADU  (Q89X45    ), DAPF_BRAHW  (C0QZX1    ), DAPF_BRASB  (A5E915    ), 
DAPF_BRASO  (A4YKA5    ), DAPF_BRUA1  (B2S885    ), DAPF_BRUA2  (Q2YLR4    ), 
DAPF_BRUAB  (Q57AW6    ), DAPF_BRUC2  (A9M8R8    ), DAPF_BRUMB  (C0RFH7    ), 
DAPF_BRUME  (Q8YJF0    ), DAPF_BRUO2  (A5VSQ7    ), DAPF_BRUSI  (B0CIT6    ), 
DAPF_BRUSU  (Q8FYF0    ), DAPF_BUCA5  (B8D8F1    ), DAPF_BUCAI  (P57649    ), 
DAPF_BUCAP  (Q8K901    ), DAPF_BUCAT  (B8D8A8    ), DAPF_BUCBP  (P59582    ), 
DAPF_BURCM  (Q0BAY6    ), DAPF_BURM7  (A3MRQ6    ), DAPF_BURM9  (A2S862    ), 
DAPF_BURMA  (Q62EZ3    ), DAPF_BURMS  (A1V7L3    ), DAPF_BURP0  (A3NQ71    ), 
DAPF_BURP6  (A3N4H9    ), DAPF_BURPS  (Q63YH7    ), DAPF_BURTA  (Q2T269    ), 
DAPF_BURVG  (A4JIQ6    ), DAPF_CALS4  (Q8R9S4    ), DAPF_CAMJ8  (A8FNJ1    ), 
DAPF_CAMJD  (A7H5P5    ), DAPF_CAMJE  (Q9PMD8    ), DAPF_CAMJJ  (A1W1D0    ), 
DAPF_CAMJR  (Q5HSQ5    ), DAPF_CAMLR  (B9KED6    ), DAPF_CARHZ  (Q3AC09    ), 
DAPF_CAUCN  (B8GVW2    ), DAPF_CAUCR  (Q9A280    ), DAPF_CAUSK  (B0T542    ), 
DAPF_CELJU  (B3PEI8    ), DAPF_CHESB  (Q11CW3    ), DAPF_CHLMU  (Q9PJW2    ), 
DAPF_CHLPN  (Q9Z833    ), DAPF_CHLT2  (B0B802    ), DAPF_CHLTA  (Q3KLS0    ), 
DAPF_CHLTB  (B0BC67    ), DAPF_CHLTE  (Q8KAX9    ), DAPF_CHLTR  (O84437    ), 
DAPF_CHRSD  (Q1QSV1    ), DAPF_CHRVO  (Q7NV18    ), DAPF_CLAM3  (A5CSL3    ), 
DAPF_CLAMS  (B0RHB0    ), DAPF_CLOAB  (Q97FV2    ), DAPF_CLOPE  (Q46185    ), 
DAPF_CLOTH  (A3DK16    ), DAPF_COLP3  (Q48AR8    ), DAPF_CORA7  (C3PGX6    ), 
DAPF_COREF  (Q8FPE1    ), DAPF_CORGB  (A4QEV1    ), DAPF_CORGL  (Q8NP73    ), 
DAPF_COXB1  (B6J630    ), DAPF_COXB2  (B6J395    ), DAPF_COXBN  (A9KGY8    ), 
DAPF_COXBR  (A9N9J6    ), DAPF_COXBU  (Q83AD4    ), DAPF_CROS8  (A7MQK2    ), 
DAPF_CUPMC  (Q1LS37    ), DAPF_CUPNH  (Q0KF42    ), DAPF_CUPNJ  (Q476V3    ), 
DAPF_CUPTR  (B2AGE5    ), DAPF_CYAP4  (B8HU20    ), DAPF_CYAP7  (B7KH06    ), 
DAPF_CYAP8  (B7K1E7    ), DAPF_DECAR  (Q47JN0    ), DAPF_DESAH  (C0QAP3    ), 
DAPF_DESAP  (B1I545    ), DAPF_DESDA  (B8IZX7    ), DAPF_DESHD  (B8FSD4    ), 
DAPF_DESRM  (A4J568    ), DAPF_ECO24  (A7ZU14    ), DAPF_ECO27  (B7UNC6    ), 
DAPF_ECO45  (B7MH73    ), DAPF_ECO55  (B7L969    ), DAPF_ECO57  (P0A6K2    ), 
DAPF_ECO5E  (B5YY56    ), DAPF_ECO7I  (B7NTD3    ), DAPF_ECO81  (B7MR29    ), 
DAPF_ECO8A  (B7M611    ), DAPF_ECOBW  (C4ZZ73    ), DAPF_ECODH  (B1XAH6    ), 
DAPF_ECOHS  (A8A6R7    ), DAPF_ECOL5  (Q0TAR6    ), DAPF_ECOL6  (Q8FBN6    ), 
DAPF_ECOLC  (B1IW95    ), DAPF_ECOLI  (P0A6K1    ), DAPF_ECOLU  (B7NFB1    ), 
DAPF_ECOSM  (B1LLY0    ), DAPF_EDWI9  (C5BBD4    ), DAPF_ELUMP  (B2KDH2    ), 
DAPF_ENT38  (A4WG08    ), DAPF_ENTFA  (Q838I3    ), DAPF_ERWT9  (B2VI49    ), 
DAPF_ERYLH  (Q2NBR6    ), DAPF_ESCF3  (B7LU47    ), DAPF_FLAPJ  (A6GYX5    ), 
DAPF_GEOKA  (Q5KVP4    ), DAPF_GEOSW  (C5D729    ), DAPF_GEOTN  (A4ISE8    ), 
DAPF_GLUOX  (Q5FQZ4    ), DAPF_GRABC  (Q0BS04    ), DAPF_HAEDU  (Q7VPN0    ), 
DAPF_HAEI8  (Q4QME8    ), DAPF_HAEIE  (A5UDX5    ), DAPF_HAEIG  (A5UHQ4    ), 
DAPF_HAEIN  (P44859    ), DAPF_HAEPS  (B8F878    ), DAPF_HAES1  (Q0I572    ), 
DAPF_HAHCH  (Q2SQ64    ), DAPF_HALHL  (A1WWB3    ), DAPF_HALOH  (B8CX90    ), 
DAPF_HELMI  (B0TGR9    ), DAPF_HELP2  (B6JLE8    ), DAPF_HELPG  (B5Z6T7    ), 
DAPF_HELPH  (Q1CTW0    ), DAPF_HELPJ  (Q9ZLR5    ), DAPF_HELPS  (B2UTR2    ), 
DAPF_HELPY  (O25290    ), DAPF_HERAR  (A4G980    ), DAPF_HISS2  (B0UWU6    ), 
DAPF_HYDS0  (B4U9P0    ), DAPF_IDILO  (Q5QUS6    ), DAPF_LACPL  (Q88V90    ), 
DAPF_LACS1  (Q1WTU5    ), DAPF_LARHH  (C1D8Q0    ), DAPF_LEIXX  (Q6AE05    ), 
DAPF_LEPBA  (B0SC36    ), DAPF_LEPBJ  (Q04W97    ), DAPF_LEPBL  (Q04X60    ), 
DAPF_LEPIC  (Q72W63    ), DAPF_LEPIN  (Q8F9V5    ), DAPF_LISIN  (Q929Z7    ), 
DAPF_LISMC  (C1KWW2    ), DAPF_LISMF  (Q71Y02    ), DAPF_LISMH  (B8DBR3    ), 
DAPF_LISMO  (Q8Y5N9    ), DAPF_LISW6  (A0AKC4    ), DAPF_MAGMM  (A0LE31    ), 
DAPF_MANSM  (Q65RL9    ), DAPF_META3  (A6UTH4    ), DAPF_METAR  (Q0W3B6    ), 
DAPF_METC4  (B7KQM2    ), DAPF_METEP  (A9W6A5    ), DAPF_METJA  (Q58519    ), 
DAPF_METKA  (Q8TY71    ), DAPF_METM5  (A4FXV0    ), DAPF_METM6  (A9AB27    ), 
DAPF_METM7  (A6VFK8    ), DAPF_METMP  (Q6LYS1    ), DAPF_METNO  (B8I9H6    ), 
DAPF_METPB  (B1ZDT1    ), DAPF_METPP  (A2SKV9    ), DAPF_METS4  (B0UCI8    ), 
DAPF_METSB  (B8EM14    ), DAPF_METTH  (O27389    ), DAPF_MICAN  (B0JJ58    ), 
DAPF_MOOTA  (Q2RK34    ), DAPF_MYCA1  (A0QIQ8    ), DAPF_MYCA9  (B1MD00    ), 
DAPF_MYCBO  (P63898    ), DAPF_MYCBP  (A1KM64    ), DAPF_MYCBT  (C1AFI5    ), 
DAPF_MYCGI  (A4TCN3    ), DAPF_MYCLB  (B8ZQU1    ), DAPF_MYCLE  (P46814    ), 
DAPF_MYCMM  (B2HL16    ), DAPF_MYCPA  (Q73W21    ), DAPF_MYCS2  (A0QVY0    ), 
DAPF_MYCSJ  (A3PYF9    ), DAPF_MYCSK  (A1UEZ9    ), DAPF_MYCTA  (A5U678    ), 
DAPF_MYCTO  (P9WP18    ), DAPF_MYCTU  (P9WP19    ), DAPF_MYCUA  (A0PT80    ), 
DAPF_MYCVP  (A1T7U8    ), DAPF_NATTJ  (B2A663    ), DAPF_NEIMA  (Q9JV69    ), 
DAPF_NEIMB  (Q9K060    ), DAPF_NITEC  (Q0AIP0    ), DAPF_NITEU  (Q82U84    ), 
DAPF_NITHX  (Q1QHJ3    ), DAPF_NITMU  (Q2Y5Z0    ), DAPF_NITOC  (Q3JEA2    ), 
DAPF_NITSB  (A6Q160    ), DAPF_NOSP7  (B2J3A7    ), DAPF_OCEIH  (Q8ENX2    ), 
DAPF_OCHA4  (A6WXE4    ), DAPF_OLICO  (B6JAP3    ), DAPF_ORYSI  (A2ZLS4    ), 
DAPF_ORYSJ  (Q2QNF7    ), DAPF_PARD8  (A6L8U3    ), DAPF_PARP8  (B2JJY4    ), 
DAPF_PARPJ  (B2T1P5    ), DAPF_PARXL  (Q146W2    ), DAPF_PASMU  (P57962    ), 
DAPF_PECAS  (Q6CZG8    ), DAPF_PECCP  (C6DHB7    ), DAPF_PELTS  (A5D193    ), 
DAPF_PELUB  (Q4FP10    ), DAPF_PHEZH  (B4RCE2    ), DAPF_PHOLL  (Q7MYN5    ), 
DAPF_PHOPR  (Q6LLN5    ), DAPF_PROM1  (A2C243    ), DAPF_PROMH  (B4F1X7    ), 
DAPF_PROMM  (Q7V7M5    ), DAPF_PROMT  (Q46L14    ), DAPF_PSE14  (Q48C02    ), 
DAPF_PSEA6  (Q15NG5    ), DAPF_PSEA7  (A6VE52    ), DAPF_PSEA8  (B7V5G9    ), 
DAPF_PSEAB  (Q02E84    ), DAPF_PSEAE  (Q51564    ), DAPF_PSEE4  (Q1I303    ), 
DAPF_PSEFL  (O05322    ), DAPF_PSEHT  (Q3IEW3    ), DAPF_PSEMY  (A4XNX4    ), 
DAPF_PSEPF  (Q3K4R8    ), DAPF_PSEPG  (B0KQ41    ), DAPF_PSEPK  (Q88CF3    ), 
DAPF_PSEPW  (B1J1W0    ), DAPF_PSESM  (Q88B09    ), DAPF_PSEU2  (Q500B6    ), 
DAPF_PSEU5  (A4VGW5    ), DAPF_PSYA2  (Q4FV85    ), DAPF_PSYCK  (Q1QE99    ), 
DAPF_PSYIN  (A1SQZ9    ), DAPF_PSYWF  (A5WCB3    ), DAPF_RALPJ  (B2UD25    ), 
DAPF_RALSO  (Q8Y344    ), DAPF_RHIEC  (Q2K386    ), DAPF_RHILO  (Q98EB6    ), 
DAPF_RHILW  (B5ZTH4    ), DAPF_RHIME  (Q92L46    ), DAPF_RHOCS  (B6IP82    ), 
DAPF_RHOE4  (C0ZYN8    ), DAPF_RHOJR  (Q0S1N7    ), DAPF_RHOOB  (C1B393    ), 
DAPF_RHOP2  (Q2J390    ), DAPF_RHOP5  (Q07UV4    ), DAPF_RHOPA  (Q6ND59    ), 
DAPF_RHOPB  (Q21CU6    ), DAPF_RHOPS  (Q13DT7    ), DAPF_RHOPT  (B3Q862    ), 
DAPF_RHOS4  (Q3IZB6    ), DAPF_RICAE  (C3PNE1    ), DAPF_RICAH  (A8GND7    ), 
DAPF_RICB8  (A8GWH4    ), DAPF_RICBR  (Q1RIT1    ), DAPF_RICCK  (A8EZ08    ), 
DAPF_RICCN  (Q92I41    ), DAPF_RICFE  (Q4ULS7    ), DAPF_RICM5  (A8F1I9    ), 
DAPF_RICPR  (Q9ZDB7    ), DAPF_RICPU  (C4K2A3    ), DAPF_RICRO  (B0BXH3    ), 
DAPF_RICRS  (A8GS10    ), DAPF_RICTY  (Q68WW4    ), DAPF_SACD2  (Q21P78    ), 
DAPF_SALA4  (B5EZS3    ), DAPF_SALDC  (B5FNU5    ), DAPF_SALHS  (B4TB37    ), 
DAPF_SALNS  (B4SZ51    ), DAPF_SALPA  (Q5PKM6    ), DAPF_SALPB  (A9MY70    ), 
DAPF_SALPK  (B5BIV6    ), DAPF_SALSV  (B4TNV9    ), DAPF_SALTI  (P0A1F3    ), 
DAPF_SALTY  (P0A1F2    ), DAPF_SERP5  (A8G852    ), DAPF_SHEAM  (A1SAP5    ), 
DAPF_SHEB2  (B8E690    ), DAPF_SHEB5  (A3D9Q0    ), DAPF_SHEB8  (A6WTF5    ), 
DAPF_SHEB9  (A9L5F5    ), DAPF_SHEDO  (Q12S90    ), DAPF_SHEFN  (Q088K8    ), 
DAPF_SHELP  (A3Q9P7    ), DAPF_SHEON  (Q8E9H5    ), DAPF_SHEPC  (A4YBF7    ), 
DAPF_SHESA  (A0KS65    ), DAPF_SHESH  (A8G0W0    ), DAPF_SHESM  (Q0HN95    ), 
DAPF_SHESR  (Q0HQJ2    ), DAPF_SHESW  (A1RPD2    ), DAPF_SHEWM  (B1KQD0    ), 
DAPF_SHIB3  (B2TUW5    ), DAPF_SHIF8  (Q0SZ00    ), DAPF_SODGM  (Q2NQF4    ), 
DAPF_SPHAL  (Q1GPI7    ), DAPF_SPHWW  (A5VAG4    ), DAPF_STRCO  (O69969    ), 
DAPF_SYNE7  (Q31LW2    ), DAPF_SYNJA  (Q2JUV6    ), DAPF_SYNJB  (Q2JLR0    ), 
DAPF_SYNP2  (B1XP39    ), DAPF_SYNP6  (Q5N013    ), DAPF_SYNY3  (P74667    ), 
DAPF_TERTT  (C5BUL6    ), DAPF_THEEB  (Q8DGM2    ), DAPF_THEFY  (Q47RR3    ), 
DAPF_THISH  (B8GT89    ), DAPF_TOLAT  (C4LDU8    ), DAPF_TRIEI  (Q116P1    ), 
DAPF_VARPS  (C5CND4    ), DAPF_VESOH  (A5CWN5    ), DAPF_VIBC3  (A5F4I6    ), 
DAPF_VIBCB  (A7N0W0    ), DAPF_VIBCH  (Q9KVL6    ), DAPF_VIBF1  (Q5E1W7    ), 
DAPF_VIBPA  (Q87KJ4    ), DAPF_VIBTL  (B7VMD4    ), DAPF_VIBVU  (Q8DD81    ), 
DAPF_VIBVY  (Q7MQC1    ), DAPF_WIGBR  (Q8D2T4    ), DAPF_WOLTR  (Q5GSB8    ), 
DAPF_WOLWR  (C0R4N2    ), DAPF_XANAC  (Q8PPQ1    ), DAPF_XANC5  (Q3BXU3    ), 
DAPF_XANC8  (Q4UYY2    ), DAPF_XANCB  (B0RNK1    ), DAPF_XANCP  (Q8P548    ), 
DAPF_XANOM  (Q2NYV5    ), DAPF_XYLF2  (B2IA16    ), DAPF_XYLFA  (Q9PD98    ), 
DAPF_XYLFM  (B0U6U5    ), DAPF_XYLFT  (Q87DI4    ), DAPF_YERE8  (A1JI90    ), 
DAPF_YERP3  (A7FD74    ), DAPF_YERPA  (Q1CBM6    ), DAPF_YERPB  (B2K072    ), 
DAPF_YERPE  (P46357    ), DAPF_YERPG  (A9R8K5    ), DAPF_YERPN  (Q1CNH8    ), 
DAPF_YERPP  (A4TRA3    ), DAPF_YERPS  (Q66FZ5    ), DAPF_YERPY  (B1JPE1    ), 
DAPF_ZYMMO  (Q5NNL4    )
» more

UniProtKB/Swiss-Prot
False negative sequences
10 sequences

DAPF2_NOSS1 (P54897    ), DAPF_GEMAT  (C1A8U3    ), DAPF_LEGPA  (Q5X822    ), 
DAPF_LEGPC  (A5IHM9    ), DAPF_LEGPH  (Q5ZYK6    ), DAPF_LEGPL  (Q5WZH5    ), 
DAPF_LEPCP  (B1Y6S6    ), DAPF_METTP  (A0B6C1    ), DAPF_RHOFT  (Q21SV0    ), 
DAPF_RUTMC  (A1AWJ5    )
» more

PDB
[Detailed view]
11 PDB

1BWZ; 1GQZ; 2GKE; 2GKJ; 2OTN; 3EJX; 3EKM; 3FVE; 4IJZ; 4IK0; 5HA4

View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission