Entry: PS01360

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General information about the entry

Entry name [info] ZF_MYND_1
Accession [info] PS01360
Entry type [info] PATTERN
Date [info] JAN-2003 (CREATED); JAN-2003 (DATA UPDATE); SEP-2014 (INFO UPDATE).
PROSITE Doc. [info] PDOC50865

Name and characterization of the entry

Description [info] Zinc finger MYND-type signature.
Pattern [info]
[CH]-x(2,4)-C-x(7,17)-C-x(0,2)-C-x(4)-[YFT]-C-x(3)-[CH]-x(6,9)-H-
x(3,4)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2014_10 which contains 546'790 sequence entries.


Total number of hits 99 in 99 different sequences
Number of true positive hits 95 in 95 different sequences
Number of 'unknown' hits
Number of false positive hits 4 in 4 different sequences
Number of false negative sequences 8
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 95.96 %
Recall (true positives / (true positives + false negatives)) 92.23 %

Comments [info]

Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
95 sequences

ANKY1_HUMAN (Q9P2S6), ANKY2_BOVIN (Q0VCS9), ANKY2_CHICK (Q5ZMD2), 
ANKY2_HUMAN (Q8IV38), ANKY2_MOUSE (Q3TPE9), ANMY1_MOUSE (Q8C0W1), 
ASHR1_ARATH (Q7XJS0), DEAF1_DROME (Q24180), DEAF1_HUMAN (O75398), 
DEAF1_MOUSE (Q9Z1T5), DEAF1_PANTR (O77562), DEAF1_RAT   (O88450), 
EGLN1_HUMAN (Q9GZT9), EGLN1_MOUSE (Q91YE3), FB342_ARATH (Q9FK27), 
GACZ_DICDI  (Q55DW9), MSS51_HUMAN (Q4VC12), MSS51_MOUSE (Q9D5Z5), 
MSS51_RAT   (D3ZKV9), MTG16_CHICK (Q5F3B1), MTG16_HUMAN (O75081), 
MTG16_MOUSE (O54972), MTG8R_HUMAN (O43439), MTG8R_MOUSE (O70374), 
MTG8R_XENLA (Q9IAB2), MTG8_HUMAN  (Q06455), MTG8_MOUSE  (Q61909), 
MUB1_ASPCL  (A1CBG9), MUB1_ASPFC  (B0Y1D1), MUB1_ASPFN  (B8NKS1), 
MUB1_ASPFU  (Q4WVI6), MUB1_ASPNC  (A2RA63), MUB1_ASPOR  (Q2U685), 
MUB1_ASPTN  (Q0CW83), MUB1_EMENI  (O42631), MUB1_NEOFI  (A1DDX0), 
MUB1_SCHPO  (P87311), MUB1_YEAST  (Q03162), PDCD2_BOVIN (Q2YDC9), 
PDCD2_HUMAN (Q16342), PDCD2_MOUSE (P46718), PDCD2_RAT   (P47816), 
PKCB1_HUMAN (Q9ULU4), SET14_CAEEL (Q09415), SET6_SCHPO  (O94256), 
SMY2A_DANRE (Q5BJI7), SMY2A_XENLA (Q7ZXV5), SMY2B_DANRE (Q5RGL7), 
SMY2B_XENLA (Q6GN68), SMYD1_HUMAN (Q8NB12), SMYD1_MOUSE (P97443), 
SMYD2_BOVIN (Q0P585), SMYD2_CHICK (E1C5V0), SMYD2_HUMAN (Q9NRG4), 
SMYD2_MOUSE (Q8R5A0), SMYD2_PIG   (C3RZA1), SMYD2_RAT   (Q7M6Z3), 
SMYD3_HUMAN (Q9H7B4), SMYD3_MOUSE (Q9CWR2), SMYD4_CHICK (Q5F3V0), 
SMYD4_HUMAN (Q8IYR2), SMYD4_MOUSE (Q8BTK5), SMYD4_PONAB (Q5R5X9), 
TDRD1_DANRE (Q58EK5), TDRD1_HUMAN (Q9BXT4), TDRD1_MOUSE (Q99MV1), 
TDRD1_ORYLA (A9CPT4), UBP15_ARATH (Q9FPS9), UBP16_ARATH (Q9SB51), 
UBP17_ARATH (Q9FKP5), UBP18_ARATH (Q67XW5), UBP19_ARATH (Q9SJA1), 
UBP19_HUMAN (O94966), UBP19_MOUSE (Q3UJD6), UBP19_RAT   (Q6J1Y9), 
Y2140_DICDI (Q54DL6), Y2454_DICDI (Q54D67), Y3589_DICDI (Q557F7), 
Y3591_DICDI (Q557F6), Y4059_DICDI (Q54Q80), Y7331_DICDI (Q54ZX8), 
Y8495_DICDI (Q54IV4), YR331_MIMIV (Q5UQS2), ZMY10_DANRE (F1QN74), 
ZMY10_DROME (Q9VU41), ZMY10_HUMAN (O75800), ZMY10_MOUSE (Q99ML0), 
ZMY10_RAT   (Q6AXZ5), ZMY10_XENLA (Q5FWU8), ZMY11_HUMAN (Q15326), 
ZMY11_MOUSE (Q8R5C8), ZMY12_HUMAN (Q9H0C1), ZMY19_HUMAN (Q96E35), 
ZMY19_MOUSE (Q9CQG3), ZMY19_RAT   (Q7TSV3)
» More

UniProtKB/Swiss-Prot
False negative sequences
8 sequences

ATXR2_ARATH (Q5PP37), BIG_ARATH   (Q9SRU2), BIG_ORYSJ   (B9G2A8), 
SMYD5_CHICK (Q5ZIZ2), SMYD5_HUMAN (Q6GMV2), SMYD5_MOUSE (Q3TYX3), 
SMYD5_XENLA (Q6GPQ4), ZMY15_HUMAN (Q9H091)
» More

UniProtKB/Swiss-Prot
False positive sequences
4 sequences

FB76_ARATH  (Q9FYF9), SET5_CRYNB  (P0CR43), SET5_CRYNJ  (P0CR42), 
VE5_RHPV1   (P24834)
» More

PDB
[Detailed view]
25 PDB

2D8Q; 2DAN; 2DJ8; 2JW6; 2OD1; 2ODD; 3MEK; 3N71; 3OXF; 3OXG; 3OXL; 3PDN; 3QWP; 3QWV; 3QWW; 3RIB; 3RU0; 3S7B; 3S7D; 3S7F; 3S7J; 3TG4; 3TG5; 4A24; 4O6F
» More

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