Entry: PS50158

General information about the entry

Entry name [info] ZF_CCHC
Accession [info] PS50158
Entry type [info] MATRIX
Date [info] JAN-2002 (CREATED); OCT-2013 (DATA UPDATE); MAY-2016 (INFO UPDATE).
PROSITE Doc. [info] PDOC50158
Associated ProRule [info] PRU00047

Name and characterization of the entry

Description [info] Zinc finger CCHC-type profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=18;
/DISJOINT: DEFINITION=PROTECT; N1=2; N2=17;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=-0.5831000; R2=0.0164828; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=348.6928711; R2=-0.0928571; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=552; H_SCORE=297; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=430; H_SCORE=309; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: D=-20; I=-20; B1=0; E1=0; MI=-105; MD=-105; IM=-105; DM=-105;
...
                A   B   C   D   E   F   G   H   I   K   L   M   N   P   Q   R   S   T   V   W   Y   Z
/I:         B1=0; BI=-105; BD=-105;
/M: SY='R'; M= -9, -6,-18, -7, -5,-19,-11,-10,-15, -1,-15, -7, -4,-13, -1,  2, -5, -7,-11,-25,-13, -4;
/M: SY='K'; M= -6,-10,-24,-11, -5,-19, -8,-13,-16,  4,-14, -7, -6, -7, -3,  4, -6, -6,-12,-23,-14, -5;
/M: SY='C'; M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='Y'; M=-17,-20,-28,-24,-20, 28,-25,  1, -6,-15, -4, -5,-15,-26,-16,-10,-16, -9,-11, 25, 39,-19;
/M: SY='N'; M= -9,  8,-24,  1,  0,-20,-13, -1,-19, 15,-22,-11, 17,-16,  2, 14,  0, -3,-18,-27,-10,  0;
/M: SY='C'; M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='G'; M= -3, -2,-28, -4,-13,-28, 47,-13,-35,-12,-28,-18,  7,-19,-13,-13,  1,-15,-28,-23,-25,-13;
/M: SY='K'; M= -7,  2,-28,  3, 16,-30,-13, -4,-26, 20,-24,-11,  2,-10, 18, 14, -1, -8,-23,-24,-14, 17;
/M: SY='P'; M= -4, -6,-26, -5,  5,-18,-15,-10,-14, -4,-15, -9, -6,  7, -2, -6, -2, -2,-14,-26,-14,  0;
/M: SY='G'; M= -2, -7,-30, -6,-17,-28, 60,-17,-38,-18,-29,-20,  1,-20,-18,-18, -1,-19,-29,-20,-26,-17;
/M: SY='H'; M=-20,  0,-30,  0,  0,-20,-20,100,-30,-10,-20,  0, 10,-20, 10,  0,-10,-20,-30,-30, 20,  0;
/M: SY='M'; M=-11,-20,-24,-23,-15,  4,-27,-11,  7, -9,  6,  9,-16,-23, -8, -5,-15, -7,  3, -9,  8,-13;
/M: SY='A'; M= 16, -7,-17,-12, -3,-20, -8,-11,-14,  2,-15, -5, -4,-12,  2,  0,  7, -1, -8,-24,-15, -1;
/M: SY='R'; M= -6, -2,-25, -4,  0,-21,-14, -7,-23, 18,-22,-12,  3,-14,  3, 24,  0, -4,-16,-22,-12,  0;
/M: SY='D'; M=-13, 27,-27, 33, 21,-32,-12,  1,-30,  6,-26,-20, 16,-10, 12, -1,  3, -6,-27,-33,-17, 17;
/M: SY='C'; M=-10,-20,120,-30,-30,-20,-30,-30,-30,-30,-20,-20,-20,-40,-30,-30,-10,-10,-10,-50,-30,-30;
/M: SY='P'; M= -9,-10,-31, -6,  0,-24,-19,-11,-21,  2,-23,-14, -9, 31, -1,  3, -4, -2,-22,-24,-18, -4;
/M: SY='E'; M= -3,  4,-23,  3, 11,-25,-12, -1,-21,  7,-20,-11,  6,-11, 10,  4,  4, -1,-18,-28,-14, 10;
/I:         E1=0; IE=-105; DE=-105;
» more

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2016_05 which contains 551'193 sequence entries.


Total number of hits 682 in 411 different sequences
Number of true positive hits 681 in 410 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 81
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 99.85 %
Recall (true positives / (true positives + false negatives)) 89.37 %

Comments [info]

Matrix type [info] protein_domain
Scaling database [info] window20_shuffled
Author [info] K_Hofmann, N_Hulo
Taxonomic range [info] Eukaryotes, Eukaryotic viruses
Maximum number of repetitions [info] 9
Feature key [info] ZN_FING
Feature description [info] CCHC-type
Version [info] 4

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
410 sequences

AIR1_SCHPO  (Q9P795    ), AIR1_YEAST  (P40507    ), AIR2_YEAST  (Q12476    ), 
BBP_ASHGO   (Q750X2    ), BBP_ASPFU   (Q4WXV6    ), BBP_CANAL   (Q5AED9    ), 
BBP_CANGA   (Q6FW77    ), BBP_CRYNB   (P0CO45    ), BBP_CRYNJ   (P0CO44    ), 
BBP_DEBHA   (Q6BSP4    ), BBP_DICDI   (Q54BM5    ), BBP_NEUCR   (Q8NIW7    ), 
BBP_SCHPO   (O74555    ), BBP_USTMA   (Q4P0H7    ), BBP_YARLI   (Q6C187    ), 
BBP_YEAST   (Q12186    ), BYR3_SCHPO  (P36627    ), CAPSD_CAMVC (P03543    ), 
CAPSD_CAMVD (P03544    ), CAPSD_CAMVN (Q00956    ), CAPSD_CAMVS (P03542    ), 
CAPSD_CERV  (P05399    ), CAPSD_CYLCV (Q7TD09    ), CAPSD_FMVD  (P09519    ), 
CAPSD_SOCMV (P15627    ), CNBP_BOVIN  (Q3T0Q6    ), CNBP_CHICK  (O42395    ), 
CNBP_HUMAN  (P62633    ), CNBP_MOUSE  (P53996    ), CNBP_PONAB  (Q5R5R5    ), 
CNBP_RAT    (P62634    ), COPIA_DROME (P04146    ), CPSF4_BOVIN (O19137    ), 
CPSF4_DROME (Q9VPT8    ), CPSF4_HUMAN (O95639    ), CPSF4_MOUSE (Q8BQZ5    ), 
CPSF4_RAT   (Q5FVR7    ), CPSF4_XENLA (Q6DJP7    ), CPSF4_XENTR (Q66KE3    ), 
CP_CSVMV    (Q66283    ), CSP1_ARATH  (O65639    ), CSP2_ARATH  (Q41188    ), 
CSP3_ARATH  (Q94C69    ), CSP4_ARATH  (Q38896    ), CXIP4_ARATH (Q84Y18    ), 
CYP59_ARATH (Q6Q151    ), DDX41_DROME (Q9V3C0    ), DIPP_MIMIV  (Q5UQW2    ), 
GA113_HUMAN (P62684    ), GAG80_MLVMN (Q8UN02    ), GAG_BAEVM   (P03341    ), 
GAG_BIV29   (P19558    ), GAG_BLVAU   (P25058    ), GAG_BLVJ    (P03344    ), 
GAG_CAEVC   (P33458    ), GAG_EIAV9   (P69730    ), GAG_EIAVC   (P69731    ), 
GAG_EIAVY   (P69732    ), GAG_FIVPE   (P16087    ), GAG_FIVSD   (P19027    ), 
GAG_FIVT2   (P31821    ), GAG_FIVWO   (Q05313    ), GAG_FLV     (P10262    ), 
GAG_GALV    (P21416    ), GAG_HTL1A   (P03345    ), GAG_HTL1C   (P14076    ), 
GAG_HTL1L   (P0C209    ), GAG_HTL1M   (P14077    ), GAG_HTL32   (Q0R5R4    ), 
GAG_HTL3P   (Q09T00    ), GAG_HTLV2   (P03346    ), GAG_HV190   (O93182    ), 
GAG_HV192   (O12157    ), GAG_HV193   (O89291    ), GAG_HV196   (Q9QBY4    ), 
GAG_HV197   (Q9QC00    ), GAG_HV19N   (P0C1K7    ), GAG_HV1A2   (P03349    ), 
GAG_HV1AN   (Q77372    ), GAG_HV1B1   (P03347    ), GAG_HV1B5   (P04593    ), 
GAG_HV1B9   (Q73367    ), GAG_HV1BR   (P03348    ), GAG_HV1C4   (P05887    ), 
GAG_HV1EL   (P04592    ), GAG_HV1ET   (Q75001    ), GAG_HV1H2   (P04591    ), 
GAG_HV1J3   (P12494    ), GAG_HV1JR   (P20873    ), GAG_HV1LW   (Q70622    ), 
GAG_HV1M2   (Q9QBZ2    ), GAG_HV1MA   (P04594    ), GAG_HV1MN   (P05888    ), 
GAG_HV1MP   (Q9QBZ6    ), GAG_HV1MV   (Q79665    ), GAG_HV1N5   (P12493    ), 
GAG_HV1ND   (P18800    ), GAG_HV1OY   (P20889    ), GAG_HV1RH   (P05890    ), 
GAG_HV1S2   (Q9WC53    ), GAG_HV1S9   (Q9WC62    ), GAG_HV1SE   (O89939    ), 
GAG_HV1U4   (P24736    ), GAG_HV1V9   (Q9Q721    ), GAG_HV1VI   (Q9QSR4    ), 
GAG_HV1Y2   (P35962    ), GAG_HV1YB   (Q9IDV8    ), GAG_HV1YF   (O91079    ), 
GAG_HV1Z2   (P12495    ), GAG_HV2BE   (P18095    ), GAG_HV2CA   (P24106    ), 
GAG_HV2D1   (P17756    ), GAG_HV2D2   (P15832    ), GAG_HV2EH   (Q74230    ), 
GAG_HV2G1   (P18041    ), GAG_HV2KR   (Q74119    ), GAG_HV2NZ   (P05891    ), 
GAG_HV2RO   (P04590    ), GAG_HV2SB   (P12450    ), GAG_HV2ST   (P20874    ), 
GAG_HV2UC   (Q76633    ), GAG_IPHA    (P04023    ), GAG_IPMA    (P11365    ), 
GAG_JEMBR   (Q82850    ), GAG_JSRV    (P31622    ), GAG_KORV    (Q9TTC2    ), 
GAG_MLVAV   (P03336    ), GAG_MLVBM   (P29167    ), GAG_MLVCB   (P27460    ), 
GAG_MLVDE   (P29168    ), GAG_MLVDU   (P23090    ), GAG_MLVF5   (P26807    ), 
GAG_MLVFF   (P26806    ), GAG_MLVFP   (P26805    ), GAG_MLVHO   (P21435    ), 
GAG_MLVMS   (P03332    ), GAG_MLVRD   (P11269    ), GAG_MMTVB   (P10258    ), 
GAG_MMTVC   (P11284    ), GAG_MPMV    (P07567    ), GAG_MSVMO   (P03334    ), 
GAG_OMVVS   (P16900    ), GAG_RSVP    (P03322    ), GAG_RSVSA   (P0C776    ), 
GAG_RSVSB   (O92954    ), GAG_SIVCZ   (P17282    ), GAG_SIVEK   (Q1A250    ), 
GAG_SIVG1   (Q02843    ), GAG_SIVGB   (P22381    ), GAG_SIVM1   (P05894    ), 
GAG_SIVMB   (Q1A268    ), GAG_SIVMK   (P05893    ), GAG_SIVMS   (P31634    ), 
GAG_SIVS4   (P12496    ), GAG_SIVSP   (P19504    ), GAG_SIVTN   (Q8AII2    ), 
GAG_SIVV1   (P27972    ), GAG_SIVVG   (P27978    ), GAG_SIVVT   (P05892    ), 
GAG_SRV1    (P04022    ), GAG_SRV2    (P51516    ), GAG_VILV    (P03352    ), 
GAG_VILV1   (P23424    ), GAG_VILV2   (P23425    ), GAG_VILVK   (P35955    ), 
GAG_WDSV    (Q88937    ), GAG_XMRV3   (Q2F7J2    ), GAG_XMRV4   (Q2F7I9    ), 
GAG_XMRV6   (Q27ID9    ), GAK10_HUMAN (P87889    ), GAK19_HUMAN (Q9YNA8    ), 
GAK21_HUMAN (P62683    ), GAK24_HUMAN (P63145    ), GAK5_HUMAN  (Q9HDB9    ), 
GAK6_HUMAN  (Q7LDI9    ), GAK7_HUMAN  (P63130    ), GAK8_HUMAN  (P62685    ), 
GAK9_HUMAN  (P63126    ), GIS2_YEAST  (P53849    ), GLH1_CAEEL  (P34689    ), 
GLH2_CAEEL  (Q966L9    ), GLH3_CAEEL  (O01836    ), GLH4_CAEEL  (O76743    ), 
GRP2_NICSY  (P27484    ), HEXP_LEIMA  (Q04832    ), LARK_DROME  (Q94901    ), 
LIN28_CAEBR (Q61CX7    ), LIN28_CAEEL (P92186    ), LIN28_CAERE (P91599    ), 
LN28A_CHICK (Q45KJ5    ), LN28A_DANRE (Q803L0    ), LN28A_HUMAN (Q9H9Z2    ), 
LN28A_MOUSE (Q8K3Y3    ), LN28A_XENLA (Q8JHC4    ), LN28A_XENTR (Q5EB47    ), 
LN28B_CHICK (Q45KJ4    ), LN28B_HUMAN (Q6ZN17    ), LN28B_MOUSE (Q45KJ6    ), 
LN28B_XENLA (Q8AVK2    ), MPE1_YEAST  (P35728    ), NO40_HUMAN  (Q9NP64    ), 
NO40_MACFA  (Q95KF9    ), NO40_MOUSE  (Q9ESX4    ), PEG10_HUMAN (Q86TG7    ), 
PEG10_MOUSE (Q7TN75    ), PNMA3_HUMAN (Q9UL41    ), PNMA3_MOUSE (Q8JZW8    ), 
POK9_HUMAN  (P63128    ), POLG_PVCV1  (Q91DM0    ), POLG_PVCV2  (Q6XKE6    ), 
POLX_TOBAC  (P10978    ), POL_BIV29   (P19560    ), POL_COYMV   (P19199    ), 
POL_HTL1A   (P03362    ), POL_HTL1C   (P14078    ), POL_HTL1L   (P0C211    ), 
POL_HTL32   (Q0R5R2    ), POL_HTL3P   (Q4U0X6    ), POL_HTLV2   (P03363    ), 
POL_HV190   (O93215    ), POL_HV192   (O12158    ), POL_HV193   (O89290    ), 
POL_HV196   (Q9QBY3    ), POL_HV197   (Q9QBZ9    ), POL_HV19N   (O41798    ), 
POL_HV1A2   (P03369    ), POL_HV1AN   (Q77373    ), POL_HV1B1   (P03366    ), 
POL_HV1B5   (P04587    ), POL_HV1B9   (Q73368    ), POL_HV1BR   (P03367    ), 
POL_HV1C4   (P05960    ), POL_HV1EL   (P04589    ), POL_HV1ET   (Q75002    ), 
POL_HV1H2   (P04585    ), POL_HV1J3   (P12498    ), POL_HV1JR   (P20875    ), 
POL_HV1LW   (P0C6F2    ), POL_HV1M2   (Q9QBZ1    ), POL_HV1MA   (P04588    ), 
POL_HV1MN   (P05961    ), POL_HV1MP   (Q9QBZ5    ), POL_HV1MV   (Q79666    ), 
POL_HV1N5   (P12497    ), POL_HV1ND   (P18802    ), POL_HV1OY   (P20892    ), 
POL_HV1RH   (P05959    ), POL_HV1S2   (Q9WC54    ), POL_HV1S9   (Q9WC63    ), 
POL_HV1SE   (O89940    ), POL_HV1U4   (P24740    ), POL_HV1V9   (Q9Q720    ), 
POL_HV1VI   (Q9QSR3    ), POL_HV1Y2   (P35963    ), POL_HV1YB   (Q9IDV9    ), 
POL_HV1YF   (O91080    ), POL_HV1Z2   (P12499    ), POL_HV2BE   (P18096    ), 
POL_HV2CA   (P24107    ), POL_HV2D1   (P17757    ), POL_HV2D2   (P15833    ), 
POL_HV2EH   (Q89928    ), POL_HV2G1   (P18042    ), POL_HV2KR   (Q74120    ), 
POL_HV2NZ   (P05962    ), POL_HV2RO   (P04584    ), POL_HV2SB   (P12451    ), 
POL_HV2ST   (P20876    ), POL_HV2UC   (Q76634    ), POL_JEMBR   (Q82851    ), 
POL_MLVMS   (P03355    ), POL_MMTVC   (P11283    ), POL_RSVP    (P03354    ), 
POL_RSVSA   (Q04095    ), POL_RSVSB   (O92956    ), POL_SIVCZ   (P17283    ), 
POL_SIVEK   (Q1A249    ), POL_SIVG1   (Q02836    ), POL_SIVGB   (P22382    ), 
POL_SIVM1   (P05896    ), POL_SIVMB   (Q1A267    ), POL_SIVMK   (P05897    ), 
POL_SIVS4   (P12502    ), POL_SIVSP   (P19505    ), POL_SIVTN   (Q8AII1    ), 
POL_SIVV1   (P27973    ), POL_SIVVG   (P27980    ), POL_SIVVT   (P05895    ), 
POL_WDSV    (O92815    ), POL_XMRV3   (Q2F7J3    ), POL_XMRV4   (Q2F7J0    ), 
POL_XMRV6   (A1Z651    ), POST_XENLA  (P27536    ), PRO_HTL1A   (P10274    ), 
PRO_HTL1C   (P14074    ), PRO_HTL1L   (P0C210    ), PRO_HTL32   (Q0R5R3    ), 
PRO_HTL3P   (Q09SZ9    ), PRO_HTLV2   (P03353    ), PRO_MMTVC   (Q9IZT2    ), 
RBBP6_HUMAN (Q7Z6E9    ), RBBP6_MOUSE (P97868    ), RBM41_DANRE (Q6IQ97    ), 
RBM4B_HUMAN (Q9BQ04    ), RBM4B_MOUSE (Q8VE92    ), RBM4B_PIG   (Q06AT9    ), 
RBM4B_RAT   (Q64LC9    ), RBM4_BOVIN  (Q3MHX3    ), RBM4_HUMAN  (Q9BWF3    ), 
RBM4_MACFA  (Q4R979    ), RBM4_MOUSE  (Q8C7Q4    ), RBM4_RABIT  (Q9BDY9    ), 
RECQ4_MOUSE (Q75NR7    ), RFA1C_ORYSJ (Q65XV7    ), RFA1E_ARATH (F4JSG3    ), 
RH35A_ORYSJ (Q0E3X4    ), RH35_ARATH  (Q9LU46    ), RH3_ARATH   (Q8L7S8    ), 
RH3_ORYSJ   (Q0DM51    ), RSZ21_ARATH (O81127    ), RSZ21_ORYSJ (Q6K4N0    ), 
RSZ22_ARATH (O81126    ), RSZ32_ARATH (Q9FYB7    ), RSZ33_ARATH (Q8VYA5    ), 
RZ1A_ARATH  (Q9LIN3    ), RZ1B_ARATH  (O22703    ), RZ1C_ARATH  (Q8RWN5    ), 
RZ21A_ORYSJ (Q69KL9    ), RZ22A_ARATH (Q9SJA6    ), RZP23_ORYSJ (Q6K9C3    ), 
SF01_HUMAN  (Q15637    ), SF01_MOUSE  (Q64213    ), SLU7_CAEEL  (Q21278    ), 
SLU7_NEUCR  (Q7SDY6    ), SLU7_YEAST  (Q02775    ), SR1IP_DANRE (Q3B7G7    ), 
SR1IP_HUMAN (Q8N9Q2    ), SR1IP_MOUSE (Q4V9W2    ), SR1IP_RAT   (Q5RJP9    ), 
SR1IP_XENTR (Q28EE8    ), SRSF7_BOVIN (Q3T106    ), SRSF7_HUMAN (Q16629    ), 
SRSF7_MOUSE (Q8BL97    ), TLH1_SCHPO  (P0CT33    ), TLH2_SCHPO  (Q1RKN3    ), 
TOP3A_ARATH (Q9LVP1    ), TUT4_HUMAN  (Q5TAX3    ), TUT4_MOUSE  (B2RX14    ), 
TUT7_HUMAN  (Q5VYS8    ), TUT7_MOUSE  (Q5BLK4    ), U1131_ARATH (Q9CAE4    ), 
XRN2_ARATH  (Q9FQ02    ), XRN2_ASPFU  (Q8TFZ1    ), XRN2_ASPOR  (Q2UCP5    ), 
XRN2_CHAGB  (Q2GNZ6    ), XRN2_CRYNB  (P0CL89    ), XRN2_CRYNJ  (P0CL88    ), 
XRN2_EMENI  (Q5BFH3    ), XRN2_GIBZE  (Q4HWE2    ), XRN2_USTMA  (Q4P149    ), 
XRN3_ARATH  (Q9FQ03    ), XRN4_ARATH  (Q9FQ04    ), Y1R1_DROME  (P16424    ), 
Y3800_DROME (Q8T8R1    ), YG31A_YEAST (Q12173    ), YG31B_YEAST (Q99315    ), 
YI31A_YEAST (Q99219    ), YI31B_YEAST (Q7LHG5    ), YL92_SCHPO  (Q9HFF2    ), 
YORF_SCHPO  (O94264    ), YRD6_CAEEL  (Q09575    ), YTH1_CRYNB  (P0CS65    ), 
YTH1_CRYNJ  (P0CS64    ), YTH1_USTMA  (Q4P384    ), ZCH12_MOUSE (Q9CZA5    ), 
ZCH12_RAT   (Q5HZA3    ), ZCH13_HUMAN (Q8WW36    ), ZCH14_HUMAN (Q8WYQ9    ), 
ZCH14_MOUSE (Q8VIG0    ), ZCH16_HUMAN (Q6ZR62    ), ZCH16_MOUSE (Q3URY0    ), 
ZCH23_HUMAN (Q6ZST2    ), ZCH24_HUMAN (Q8N2G6    ), ZCH24_MACFA (Q8HXK7    ), 
ZCH24_MOUSE (B2RVL6    ), ZCHC2_HUMAN (Q9C0B9    ), ZCHC2_MOUSE (Q69ZB8    ), 
ZCHC2_RAT   (Q498S6    ), ZCHC3_HUMAN (Q9NUD5    ), ZCHC4_XENLA (Q6DCD7    ), 
ZCHC5_HUMAN (Q8N8U3    ), ZCHC7_BOVIN (Q2KIN0    ), ZCHC7_HUMAN (Q8N3Z6    ), 
ZCHC7_MOUSE (B1AX39    ), ZCHC7_RAT   (B1WC15    ), ZCHC7_XENLA (A1L2T6    ), 
ZCHC8_CHICK (Q5F3D1    ), ZCHC8_DROME (Q2PE14    ), ZCHC8_HUMAN (Q6NZY4    ), 
ZCHC8_MOUSE (Q9CYA6    ), ZCHC8_PONAB (Q5R789    ), ZCHC8_XENLA (Q6DD45    ), 
ZCHC9_HUMAN (Q8N567    ), ZCHC9_MOUSE (Q8R1J3    ), ZCRB1_BOVIN (Q56JZ7    ), 
ZCRB1_DANRE (Q5SP50    ), ZCRB1_HUMAN (Q8TBF4    ), ZCRB1_MOUSE (Q9CZ96    ), 
ZCRB1_RAT   (Q499V6    ), ZCRB1_XENLA (Q6DJI9    )
» more

UniProtKB/Swiss-Prot
False negative sequences
81 sequences

CAPSD_CAMVE (Q02951    ), CLIP1_CHICK (O42184    ), CLIP1_HUMAN (P30622    ), 
CLIP1_MOUSE (Q922J3    ), DDB2_ARATH  (Q6NQ88    ), DDX41_DICDI (Q54KG1    ), 
DDX41_HUMAN (Q9UJV9    ), DDX41_MOUSE (Q91VN6    ), GAGXE_DROME (Q9NBX5    ), 
IDD10_ARATH (Q700D2    ), IDD11_ARATH (Q9LRW7    ), IDD12_ARATH (O22759    ), 
IDD13_ARATH (F4JYZ8    ), IDD14_ARATH (Q9C9X7    ), IDD15_ARATH (F4IPE3    ), 
IDD16_ARATH (Q9FRH4    ), IDD1_ARATH  (Q9LVQ7    ), IDD2_ARATH  (Q9SCQ6    ), 
IDD3_ARATH  (Q9ZWA6    ), IDD4_ARATH  (Q8GYC1    ), IDD5_ARATH  (Q9ZUL3    ), 
IDD6_ARATH  (Q8RWX7    ), IDD7_ARATH  (Q8H1F5    ), IDD8_ARATH  (Q9FFH3    ), 
IDD9_ARATH  (Q944L3    ), LIN28_DROME (Q9VRN5    ), MEP1_CAEBR  (Q61SK8    ), 
MEP1_CAEEL  (Q21502    ), RH35B_ORYSJ (Q5Z6G5    ), RH43_ARATH  (Q9SZB4    ), 
RNP1_CAEEL  (Q10667    ), RP9_HUMAN   (Q8TA86    ), RP9_MOUSE   (P97762    ), 
SIGM3_REOVD (P03527    ), SIGM3_REOVJ (P30211    ), SIGM3_REOVL (P07939    ), 
SLU7A_ARATH (Q9SHY8    ), SLU7B_ARATH (O23174    ), SLU7_ASHGO  (Q74ZN9    ), 
SLU7_ASPFU  (Q4WWR2    ), SLU7_BOVIN  (Q3ZBE5    ), SLU7_CHICK  (Q5ZIG2    ), 
SLU7_CRYNB  (P0CR53    ), SLU7_CRYNJ  (P0CR52    ), SLU7_DANRE  (Q5U3F2    ), 
SLU7_DICDI  (Q54TA0    ), SLU7_DROME  (Q9VAQ7    ), SLU7_EMENI  (Q5B3U2    ), 
SLU7_HUMAN  (O95391    ), SLU7_MACFA  (Q4R4P2    ), SLU7_MAGO7  (Q51LA6    ), 
SLU7_MOUSE  (Q8BHJ9    ), SLU7_ORYSI  (A2YQU8    ), SLU7_ORYSJ  (Q6ZK48    ), 
SLU7_RAT    (Q80ZG5    ), SLU7_SCHPO  (Q9Y7Y2    ), SLU7_XENLA  (Q3KQD1    ), 
SLU7_YARLI  (Q6C9T0    ), TOP3A_ORYSJ (C7J0A2    ), XRN2_CAEBR  (Q60SG7    ), 
XRN2_CAEEL  (Q9U299    ), XRN2_CHICK  (Q5ZIP4    ), XRN2_DROME  (Q9VM71    ), 
XRN2_HUMAN  (Q9H0D6    ), XRN2_MOUSE  (Q9DBR1    ), XRN2_NEUCR  (Q8WZX5    ), 
XRN2_PONAB  (Q5R4L5    ), Y4919_ARATH (Q8VZ67    ), YTH1_YEAST  (Q06102    ), 
ZCC18_HUMAN (P0CG32    ), ZCC18_MOUSE (Q8VD24    ), ZCH10_HUMAN (Q8TBK6    ), 
ZCH10_MOUSE (Q9CX48    ), ZCH10_RAT   (Q5EB97    ), ZCH12_BOVIN (Q08DL1    ), 
ZCH12_HUMAN (Q6PEW1    ), ZCHC4_BOVIN (E1BGQ2    ), ZCHC4_HUMAN (Q9H5U6    ), 
ZCHC4_MOUSE (Q8BKW4    ), ZCHC4_RAT   (D3ZV31    ), ZCHC4_XENTR (Q66IH9    )
» more

UniProtKB/Swiss-Prot
False positive sequences
1 sequence

EIF3G_ASHGO (Q759T4    )

		
PDB
[Detailed view]
40 PDB

1A6B; 1AAF; 1DSQ; 1ESK; 1F6U; 1HVN; 1HVO; 1MFS; 1NC8; 1NCP; 1U6P; 1WWD; 1WWE; 1WWF; 1WWG; 2BL6; 2CQF; 2DI2; 2E1X; 2EC7; 2EXF; 2IHX; 2IWJ; 2JZW; 2L45; 2L46; 2L4L; 2LI8; 2LLI; 2M3Z; 2MQV; 2MS0; 2MS1; 2YSA; 2ZNF; 3NYB; 3TRZ; 3TS0; 3TS2; 5I1R
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