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| Entry: PS50800 |
General information about the entry
| Entry name [info] | SAP |
| Accession [info] | PS50800 |
| Entry type [info] | MATRIX |
| Date [info] | 01-FEB-2003 CREATED; 10-MAY-2017 DATA UPDATE; 05-JUL-2017 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC50800 |
| Associated ProRule [info] | PRU00186 |
Name and characterization of the entry
| Description [info] | SAP motif profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=35; /DISJOINT: DEFINITION=PROTECT; N1=4; N2=32; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.1756001; R2=0.0199757; TEXT='NScore'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=1162.7791748; R2=1.5220884; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=317; H_SCORE=1645; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=217; H_SCORE=1493; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: D=-20; I=-20; B1=*; E1=*; MI=-105; MD=-105; IM=-105; DM=-105; M0=-8; ... A B C D E F G H I K L M N P Q R S T V W Y Z /I: B1=0; BI=-105; BD=-105; /M: SY='L'; M=-11,-18,-24,-20, -8, 5,-27,-11, 6, -8, 10, 8,-18,-22,-11, -9,-17, -9, 3,-13, 8,-10; /M: SY='T'; M= 9, -6,-17,-11, -1,-16,-10,-14, -8, -9, -9, -3, -5,-11, -4,-13, 7, 11, -4,-26,-14, -3; /M: SY='S'; M= -4,-10,-24, -8, -2,-19, -4, -7,-14,-10,-13, -9, -5, -1, -6,-12, 3, -4,-14,-29,-15, -5; /M: SY='L'; M= -8,-25,-19,-28,-21, 9,-25,-13, 16,-21, 25, 23,-23,-26,-15,-16,-18, -6, 12,-18, 4,-18; /M: SY='T'; M= -4, -5, -7,-10, -6,-17,-17,-14,-17, 3,-18,-11, -1,-15, -3, 8, 10, 15, -8,-30,-13, -6; /M: SY='V'; M= -2,-14,-18,-15,-12, -8,-24,-15, 9,-12, 0, 4,-16,-21, -9,-14, -6, 0, 15,-23, -3,-11; /M: SY='S'; M= 4, -2,-16, -3, 2,-20, -9, -4,-20, -5,-23,-16, 4, -5, 0, -3, 21, 14,-13,-33,-15, 0; /M: SY='E'; M= -3, 5,-25, 9, 23,-22,-17, -6,-21, 4,-16,-13, -2, -9, 10, -4, -1, -8,-17,-25,-14, 17; /M: SY='L'; M=-10,-30,-22,-32,-22, 8,-32,-22, 27,-30, 43, 20,-28,-28,-20,-22,-28,-10, 14,-20, 0,-22; /M: SY='R'; M=-14, -4,-30, -4, 8,-28,-20, 0,-27, 30,-23, -7, 0,-14, 24, 42, -7,-10,-23,-20,-10, 14; /M: SY='D'; M= -8, 12,-24, 17, 2,-26, -8, -8,-19, -4,-19,-11, 4,-13, 0, -8, 4, -2,-13,-31,-16, 1; /M: SY='M'; M= -1,-15,-22,-19, -8, -4,-23,-16, 2, -4, 5, 6,-13,-17, -9, -8,-11, -5, 0,-19, -5, -9; /M: SY='C'; M= -5,-25, 24,-29,-22, -2,-27,-23, 2,-28, 23, 5,-25,-31,-22,-23,-20, -9, 3,-29,-11,-22; /M: SY='R'; M= -6, -2,-26, 0, 10,-26, -5, -6,-28, 16,-26,-14, 2,-12, 9, 18, 4, -5,-21,-26,-16, 9; /M: SY='E'; M= 2, -4,-22, -4, 9,-15,-15, -1,-17, 3,-17,-10, -3,-12, 5, -2, 3, -4,-13,-22, -6, 7; /M: SY='R'; M= -9,-14,-22,-17, -9, -1,-22, -9, -2, -5, 5, 4,-11,-23, -8, 6,-13, -7, 0,-19, -1,-10; /M: SY='G'; M= 2, -8,-27, -8,-17,-28, 59,-18,-37,-18,-30,-20, 2,-18,-17,-18, 7,-13,-27,-23,-28,-17; /M: SY='L'; M=-11,-25,-21,-26,-16, 8,-28,-16, 11,-19, 30, 13,-24,-27,-13, -7,-23, -9, 6,-18, 0,-15; /M: SY='S'; M= -1, -1,-23, 0, 1,-24, -9, -9,-23, -1,-26,-18, 3, 10, -1, 4, 11, 2,-18,-32,-20, -2; /M: SY='T'; M= 1, -7, -4,-13,-10,-13,-19,-10,-11, -7,-10, -7, -5,-16, -9, -8, 7, 19, -2,-30,-10,-10; /M: SY='N'; M= -5, 11,-21, 7, 1,-23, -3, 9,-23, -6,-26,-16, 18, -7, 2, -6, 13, 4,-22,-34,-15, 0; /M: SY='G'; M= 1, -9,-28, -9,-18,-29, 65,-19,-38,-19,-30,-20, 1,-19,-18,-19, 3,-17,-28,-22,-29,-18; /M: SY='R'; M= -8, -6,-25, -8, -5,-19,-11, -6,-18, 2,-18,-10, -1, 0, -4, 5, -1, 0,-14,-27,-14, -6; /M: SY='K'; M=-12, -1,-30, 0, 12,-28,-20, -8,-30, 44,-28,-11, 0,-11, 11, 34, -9,-10,-21,-21,-11, 11; /M: SY='Q'; M= 1, -7,-25, -9, 2,-26,-16, 5,-18, 6,-17, -5, -5, -6, 16, 8, -3, -8,-16,-23,-10, 7; /M: SY='E'; M=-12, 0,-25, 3, 12,-14,-21, 3,-12, -3, -6, -7, -2,-16, 0, -1, -8, -8,-11,-25, -5, 5; /M: SY='L'; M= -9,-29,-20,-31,-22, 7,-30,-20, 23,-27, 42, 23,-28,-28,-19,-20,-27, -9, 15,-21, -1,-21; /M: SY='I'; M= -8,-20,-11,-24,-13, -8,-30,-19, 15,-19, 11, 8,-18,-22, -7,-17,-13, -5, 10,-25, -7,-12; /M: SY='D'; M=-11, 11,-25, 15, 8,-26,-19, -8,-19, 6,-18,-12, 2,-12, 4, 2, -1, 1,-13,-29,-13, 5; /M: SY='R'; M=-12,-13,-15,-15, -6,-17,-21, -8,-20, 16,-12, -7, -7,-22, 0, 40,-10, -9,-11,-23,-11, -6; /M: SY='L'; M= -6,-16,-14,-19,-16, -4,-26, -2, 7,-21, 12, 6,-15,-24,-13,-19,-16,-10, 2,-21, 4,-17; /M: SY='R'; M= -2, -5,-21,-10, -6,-14,-17,-11,-10, 6, -5, -4, 0,-19, -5, 9, -6, -2, -6,-24,-11, -6; /M: SY='E'; M=-10, 8,-27, 10, 16,-29, -8, 12,-29, 10,-25,-13, 9,-11, 13, 4, 1, -9,-26,-28,-12, 14; /M: SY='Y'; M= -4,-20,-26,-23,-18, 5,-15, 3, -7,-18, 0, -2,-17,-24,-14,-15,-16,-13, -7, 11, 16,-17; /M: SY='L'; M= -8,-16,-21,-18, -6, -1,-27,-17, 7,-12, 10, 7,-16,-18,-11,-12,-11, 1, 7,-23, -5, -9; /I: E1=0; IE=-105; DE=-105;» more |
Numerical results [info]
| Total number of hits | 118 in 115 different sequences |
| Number of true positive hits | 118 in 115 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 17 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 87.41 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 2 |
| Feature key [info] | DOMAIN |
| Feature description [info] | SAP |
| Version [info] | 5 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
115 sequences
049L_FRG3G (Q6GZS7 ), ACINU_HUMAN (Q9UKV3 ), ACINU_MOUSE (Q9JIX8 ), AIM34_ASHGO (Q75CC0 ), AIM34_KLULA (Q6CUC1 ), AIM34_LACTC (C5DEP0 ), AIM34_YARLI (Q6CFD4 ), AIM34_YEAS1 (B3LLQ4 ), AIM34_YEAS2 (C7GLB5 ), AIM34_YEAS6 (B5VPC6 ), AIM34_YEAS7 (A6ZM65 ), AIM34_YEAS8 (C8ZEK9 ), AIM34_YEAST (Q03673 ), AIM34_ZYGRC (C5DTC6 ), ARP_ARATH (P45951 ), CCAR1_HUMAN (Q8IX12 ), CCAR1_MOUSE (Q8CH18 ), CCAR1_XENLA (Q641G3 ), CCE1_SCHPO (Q10423 ), DPPA2_HUMAN (Q7Z7J5 ), ERI1_CAEEL (O44406 ), ERI1_HUMAN (Q8IV48 ), ERI1_MOUSE (Q7TMF2 ), ERI1_RAT (Q5FVR4 ), ERI1_SCHPO (Q08I43 ), HNRL1_HUMAN (Q9BUJ2 ), HNRL1_MOUSE (Q8VDM6 ), HNRL2_HUMAN (Q1KMD3 ), HNRL2_MOUSE (Q00PI9 ), HNRPU_HUMAN (Q00839 ), HNRPU_MOUSE (Q8VEK3 ), KU70_ARATH (Q9FQ08 ), KU70_ASPOR (Q2MHH4 ), KU70_ASPSO (Q2MHH3 ), KU70_CHAGB (Q2H0I3 ), KU70_COCIM (Q1DU75 ), KU70_EMENI (Q5AVC7 ), KU70_NEUCR (Q7SA95 ), KU70_ORYSJ (Q7F1M0 ), KU70_PHANO (Q0U5F2 ), KU70_RHIAP (Q26228 ), KU70_SCHPO (O94395 ), MASTR_BOVIN (A7E346 ), MASTR_HUMAN (Q6ZN01 ), MASTR_MOUSE (Q0ZCJ7 ), MKL1_HUMAN (Q969V6 ), MKL1_MOUSE (Q8K4J6 ), MKL1_XENLA (Q8AYC2 ), MKL2_HUMAN (Q9ULH7 ), MKL2_MOUSE (P59759 ), MRTFB_XENLA (Q8AYC1 ), MYCD_HUMAN (Q8IZQ8 ), MYCD_MOUSE (Q8VIM5 ), MYCD_PIG (Q7YR76 ), MYCD_RAT (Q8R5I7 ), PARP1_MAIZE (Q9ZSV1 ), PARP1_ORYSJ (Q7EYV7 ), PARP2_ARATH (Q11207 ), PARP2_MAIZE (O50017 ), PARP3_SOYBN (Q9SWB4 ), PIAS1_HUMAN (O75925 ), PIAS1_MOUSE (O88907 ), PIAS2_HUMAN (O75928 ), PIAS2_MOUSE (Q8C5D8 ), PIAS2_RAT (Q6AZ28 ), PIAS3_HUMAN (Q9Y6X2 ), PIAS3_MOUSE (O54714 ), PIAS3_RAT (O70260 ), PIAS4_HUMAN (Q8N2W9 ), PIAS4_MOUSE (Q9JM05 ), PLI1_SCHPO (O94451 ), PRP2A_ORYSJ (Q5Z8Q9 ), RAD18_ASHGO (Q75EN0 ), RAD18_ASPFU (Q4WZJ6 ), RAD18_CANAL (Q5A4N5 ), RAD18_CANGA (Q6FPI4 ), RAD18_DEBHA (Q6BLM3 ), RAD18_EMENI (Q02398 ), RAD18_HUMAN (Q9NS91 ), RAD18_KLULA (Q6CTZ8 ), RAD18_MOUSE (Q9QXK2 ), RAD18_NEUCR (P33288 ), RAD18_SCHPO (O74747 ), RAD18_YARLI (Q6CHI1 ), RAD18_YEAST (P10862 ), RRC1_ARATH (Q9C5J3 ), SAFB1_HUMAN (Q15424 ), SAFB1_MOUSE (D3YXK2 ), SAFB1_PONAB (Q5R452 ), SAFB1_RAT (O88453 ), SAFB2_HUMAN (Q14151 ), SAFB2_MOUSE (Q80YR5 ), SARNP_HUMAN (P82979 ), SARNP_MOUSE (Q9D1J3 ), SARNP_PONAB (Q5R4V4 ), SARNP_RAT (Q498U4 ), SF3B2_HUMAN (Q13435 ), SIZ1_ARATH (Q680Q4 ), SIZ1_ORYSJ (Q6L4L4 ), SIZ1_YEAST (Q04195 ), SIZ2_ORYSJ (Q6ASW7 ), SIZ2_YEAST (Q12216 ), SLTM_HUMAN (Q9NWH9 ), SLTM_MOUSE (Q8CH25 ), SLTM_XENLA (Q498L2 ), THO1_YEAST (P40040 ), XRCC6_CHICK (O93257 ), XRCC6_HUMAN (P12956 ), XRCC6_MOUSE (P23475 ), Y0785_DICDI (Q54UW0 ), Y0787_DICDI (Q54UV9 ), Y0809_DICDI (Q54UV8 ), Y1095_DICDI (Q54UG3 ), Y1301_DICDI (Q54UG2 ), YCW3_SCHPO (O74871 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
17 sequences
C3H62_ORYSJ (Q338N2 ), DEK_HUMAN (P35659 ), DEK_MOUSE (Q7TNV0 ), DEK_RAT (Q6AXS3 ), DPPA2_MOUSE (Q9CWH0 ), KU70_DICDI (Q54MA9 ), NEW25_SCHPO (G2TRT4 ), PARP3_MEDTR (Q1SGF1 ), RFFL_HUMAN (Q8WZ73 ), RFFL_MOUSE (Q6ZQM0 ), RFFL_RAT (Q8CIN9 ), RNF34_BOVIN (Q5E9J6 ), RNF34_HUMAN (Q969K3 ), RNF34_MOUSE (Q99KR6 ), RNF34_PONAB (Q5NVC7 ), RNF34_RAT (Q6AYH3 ), RRC1L_ARATH (F4KIA8 )» more |
| PDB [Detailed view] |
18 PDB
1H1J; 1JEQ; 1JJR; 1KCF; 1V66; 1ZBH; 1ZBU; 1ZRJ; 2DO1; 2DO5; 2KVU; 2KW9; 2RNN; 2RNO; 2WQG; 4L8R; 4QOZ; 4UZW » more |
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