PROSITE

/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=35;
/DISJOINT: DEFINITION=PROTECT; N1=1; N2=35;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3351829; R2=0.0088513; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=900; N_SCORE=10.3; MODE=1; TEXT='R';
/CUT_OFF: LEVEL=-1; SCORE=211; N_SCORE=4.2; MODE=1; TEXT='R?';
/DEFAULT: M0=-33; D=-50; I=-50; B1=-500; E1=-500; MI=-105; MD=-105; IM=-105; DM=-105;

                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-105; BD=-105;
/M: SY='Y'; M= -16, -91,  44, -31, -26, -34, -73, -12, -38,  18,  24,  30, -23, -19,  -9,  -6, -31,  -2, -84,  59;
/M: SY='W'; M= -49, -92,  19, -41,   9, -89, -83,  11, -80,  39, -68, -23,   9, -79,   5,  36, -75, -18,  90,   3;
/M: SY='E'; M=  20, -92,  45,  50, -43, -49, -74, -45,  24, -19, -81,  20, -10,  15,  -9,  -8, -43, -84, -94,   4;
/M: SY='R'; M= -42, -95,  32,  46, -93, -42,  -5, -42,  32, -58, -83,  -2, -83,  18,  59,  13,  -9, -88, -96, -22;
/M: SY='E'; M=  22, -95, -20, 105, -97, -89, -74, -39, -63, -89, -86, -75, -76, -56, -72, -72, -76, -22, -98, -90;
/M: SY='L'; M= -84, -87,-102, -95,  30,-103, -87,  -4, -95,  83,  29, -99,-100, -90, -92, -93, -80,   2, -86, -66;
/M: SY='N'; M=  15, -91,   3,  46, -31, -22,  18, -48,   4, -57, -82,  49,  -4,  43, -17,  12, -26, -43, -98, -83;
/M: SY='Y'; M= -87, -92, -98, -93,  73, -99, -77,  -1,  -8,  41, -61, -94,-100, -88, -85, -89, -82, -21,  59,  81;
/M: SY='T'; M=  -7,  60, -87, -86, -76, -91, -91,  17, -84,  17, -66, -78, -88, -86, -89, -15,  78,  38,-101, -81;
/M: SY='E'; M=  -6, -91,  30,  35, -86, -31, -18,  -4,  28, -16,  18,  18, -84,  15, -17,  23,  -7, -27, -96, -18;
/M: SY='E'; M= -11, -94,  43,  58, -35, -86,  -2, -39,  37, -18, -10,  15, -83,  26,   7, -16, -75, -42, -97, -82;
/M: SY='M'; M=  29,  37, -93, -86,  -5, -46, -87,  44,  18,  34,  52, -86, -92, -21, -82, -80, -41,   4, -91, -75;
/M: SY='I'; M=  -8, -90,-101, -96,   8,-101, -93,  81, -94,  55,   4, -94, -95, -90, -95, -88, -35, -47, -88, -70;
/M: SY='E'; M= -78, -93,  17,  56,  10, -17, -74, -25,  19,   4, -13,  21, -84,  36,  14,  -8, -35, -42, -93, -78;
/M: SY='D'; M=  -4, -89,  40,  15, -33, -86, -78, -21,  26,  26,  -9,  23, -86,  -3, -34,  -3,  24, -10, -97, -80;
/M: SY='N'; M= -27,  -7,  83, -30,  -7, -78, -69, -39, -72, -53, -86,  84, -89, -25, -79, -20, -70, -22,-103,   1;
/M: SY='P'; M=  30,  -9, -82, -15,   6, -82, -85,   5, -79, -50, -78,  -1,  95,   1, -87,   0, -39, -26, -93, -85;
/M: SY='K'; M=   3, -93,   9,  25, -42, -23,  -9, -94,  68, -92, -83,  -2, -83,   7,  31,  17, -74, -89, -90,  16;
/M: SY='N'; M= -80,  -5,  11, -74,  16, -73,  39, -38, -70, -92, -83, 114, -91, -71, -77, -12, -67, -45,-106, -79;
/M: SY='Y'; M= -43, -96, -76,  14,  23, -89,  -4, -34, -76, -76, -72,  48, -29,  30, -77, -77, -79, -82, -60, 112;
/M: SY='H'; M= -41, -87, -74, -72, -89, -39,  82, -90, -73, -89, -81, -64, -82,  45, -75,  78,  49, -85,  44, -74;
/M: SY='A'; M=  59,  18, -91, -86, -25, -27, -92,  37, -86, -29, -68, -84,  -5, -85, -90,  -7,  -9,  48, -96, -82;
/M: SY='W'; M= -93,-118,-120, -98, -57, -91,-117, -91, -89, -88, -91,-113, -97, -89, -93,-100,-105,-105, 181,  -4;
/M: SY='H'; M= -45, -90,  -7, -72,  -4, -78,  94, -42, -69, -88, -79,  81, -88,  24,  -2,  26,   7, -89,-102, -16;
/M: SY='Y'; M= -87,  -5, -81, -80,  10, -92,  99, -35, -78, -75, -69, -22, -95,  34, -75, -80, -83, -84, -63, 110;
/M: SY='R'; M= -84, -98, -84, -73, -85, -96, -10, -34, -48,  16, -73, -77, -94, -62, 111, -80, -34, -83, -93, -78;
/M: SY='R'; M= -23,  18, -83, -72,  27, -90,  -9, -83,  20, -30,  -8, -76, -91,  47,  81, -20, -29, -23, -85,  15;
/M: SY='W'; M= -49, -13, -38, -18,  46,  21, -90,  -7, -15, -25, -77,  -6, -92,   1, -85, -41, -31,  -6, 128,   2;
/M: SY='V'; M= -25,  17,-100, -95,   3,-100, -93,  50, -93,  49, -55, -94, -96, -91, -94, -86, -12,  56, -91, -16;
/M: SY='L'; M=  -8, -10, -99, -92, -29, -99, -10,  42, -92,  65,   1, -94, -97, -20, -91, -87, -78,  27,  17,  -1;
/M: SY='E'; M= -26, -93,  -9,  44,   8, -13, -76, -22,  39, -53, -80, -27,  -2,  43,  20,   9,  10, -41, -92, -80;
/M: SY='N'; M= -22, -90,   2,  10, -33, -83,  44, -83,   5,   2, -10,  60, -87,  25,  30,   3,  14, -43,   7, -77;
/M: SY='F'; M=  -2, -88,   4, -42,  41, -46, -12,  14, -37,  40,  32,  -7, -92, -20, -10, -11,  13, -66, -85,   9;
/M: SY='P'; M= -26, -93,   9,   9, -30,  29,  31, -34,  33, -86,  31, -10,  42, -26, -34,  15, -14, -42, -92,   3;
/M: SY='D'; M= -27, -91,  25,  18, -87,  -4,  11, -78,  10,   2, -77,  14,  17,   1,   2,  19,   3,  15,  12, -82;
/I:         E1=0; IE=-105; DE=-105;

• UniProtKB/Swiss-Prot release number: 2013_05, total number of sequence entries in that release: 540052.
  
• Total number of hits in UniProtKB/Swiss-Prot: 134 hits in 25 different sequences
  
• Number of hits on proteins that are known to belong to the set under consideration: 134 hits in 25 different sequences
  
• Number of hits on proteins that could potentially belong to the set under consideration: 0 hits in 0 different sequences
  
• Number of false hits (on unrelated proteins): 0 hits in 0 different sequences
  
• Number of known missed hits: 0
  
• Number of partial sequences which belong to the set under consideration, but which are not hit by the pattern or profile because they are partial (fragment) sequences: 0
  
• Precision (true hits / (true hits + false positives)): 100.00 %
  
• Recall (true hits / (true hits + false negatives)): 100.00 %
  

• MATRIX_TYPE: protein_domain
  
• Scaling database: UniProtKB/Swiss-Prot: reversed
  
• Matrix author: PS_Langendijk_Genevaux
  
• Taxonomic range: Eukaryotes
  
• Maximum known number of repetitions of the pattern in a single protein: 6
  
• FT_KEY: REPEAT
  
• FT_DESC: PFTA
  
• VERSION: 1
  

FNTA_ARATH  (Q9LX33), FNTA_BOVIN  (P29702), FNTA_CANAX  (Q9Y765), 
FNTA_DICDI  (Q54RT9), FNTA_HUMAN  (P49354), FNTA_MOUSE  (Q61239), 
FNTA_PEA    (O24304), FNTA_RAT    (Q04631), FNTA_SCHPO  (O60052), 
FNTA_SOLLC  (P93227), FNTA_YEAST  (P29703), PGTA_BOVIN  (Q5EA80), 
PGTA_CANAX  (O93829), PGTA_DICDI  (Q55DQ4), PGTA_HUMAN  (Q92696), 
PGTA_MOUSE  (Q9JHK4), PGTA_PIG    (A5A779), PGTA_PONAB  (Q5NVK5), 
PGTA_RAT    (Q08602), PGTA_SCHPO  (O94412), PGTA_YEAST  (Q00618), 
PTAR1_DANRE (A3KPW7), PTAR1_HUMAN (Q7Z6K3), PTR1A_XENLA (Q0IHB3), 
PTR1B_XENLA (A1L3L1)

[Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format]

Retrieve the sequence logo from the alignment