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PROSITE entry PS00709


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PURL: https://purl.expasy.org/prosite/signature/PS00709

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_L30E_1
Accession [info] PS00709
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00588

Name and characterization of the entry

Description [info] Ribosomal protein L30e signature 1.
Pattern [info] 
[STA]-x(5)-G-x-[QKRN]-x(2)-[LIVMQ]-[KRQT]-x(2)-[KR]-x-[GS]-x(2)-[KQ]-x-
[LIVM](3).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 49 in 49 different sequences
Number of true positive hits 48 in 48 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 17
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 97.96 %
Recall (true positives / (true positives + false negatives)) 73.85 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 48 sequences 

RL301_ARATH (Q9C8F7), RL302_ARATH (Q8VZ19), RL303_ARATH (Q9LSA3), 

RL30A_SCHPO (P52808), RL30B_SCHPO (Q9UTP0), RL30E_AERPE (Q9YAU3), 
RL30E_ARCFU (O28389), RL30E_METJA (P54061), RL30E_METKA (Q8TXJ0), 
RL30E_METM5 (A4FWF4), RL30E_METM6 (A9A9U8), RL30E_METM7 (A6VGV1), 
RL30E_METMP (Q6LXI6), RL30E_METTH (O27127), RL30E_METVS (P14025), 
RL30E_PYRAB (Q9V112), RL30E_PYRFU (Q8U0M6), RL30E_PYRHO (O74018), 
RL30E_SACS2 (Q980R3), RL30E_SULAC (P11522), RL30E_SULTO (P58376), 
RL30E_THECE (P29160), RL30E_THESM (C6A1G2), RL30_BOVIN  (Q3T0D5), 
RL30_BRABE  (P58374), RL30_CANAL  (A0A1D8PM75), RL30_CANGA  (Q6FXZ0), 
RL30_CHICK  (P67883), RL30_DICDI  (Q55BS9), RL30_EREGS  (Q752U5), 
RL30_HUMAN  (P62888), RL30_ICTPU  (P58372), RL30_KLULA  (P38664), 
RL30_LEIMA  (P39095), RL30_LUPLU  (O49884), RL30_MACFA  (Q76KA2), 
RL30_MAIZE  (O48558), RL30_MOUSE  (P62889), RL30_NEUCR  (Q7S7F1), 
RL30_OPHHA  (P67884), RL30_ORYSJ  (Q9SDG6), RL30_RABIT  (G1TDL2), 
RL30_RAT(P62890), RL30_SPOFR  (P58375), RL30_TRYBB  (P49153), 
RL30_WHEAT  (Q5I7K9), RL30_YARLI  (Q6C4U7), RL30_YEAST  (P14120)
» more

UniProtKB/Swiss-Prot
False negative sequences		 17 sequences 

RL30E_CALMQ (A8MB78), RL30E_METAC (Q8TRB9), RL30E_METB6 (A7I9N4), 

RL30E_METHJ (Q2FPJ8), RL30E_METMA (Q8PUR3), RL30E_METPE (B8GDW0), 
RL30E_METS3 (A5ULN4), RL30E_METST (Q2NEK6), RL30E_METTP (A0B560), 
RL30E_PYRAE (Q8ZYQ6), RL30E_PYRCJ (A3MXZ2), RL30E_PYRIL (A1RSE6), 
RL30E_PYRNV (B1YC27), RL30E_THEGJ (C5A206), RL30E_THEKO (Q5JE35), 
RL30_EUPES  (Q9M5M6), RL30_TETTS  (P0DJ59)
» more

UniProtKB/Swiss-Prot
False positive sequences		 1 sequence 

RXL7_BACSU  (P46350)


				
	

	

		PDB
[Detailed view]		
		
			437 PDB
			


			pdb_00001ck2; pdb_00001cn7; pdb_00001go0; pdb_00001go1; pdb_00001h7m; pdb_00001nmu; pdb_00001t0k; pdb_00001w3e; pdb_00001w40; pdb_00001w41; pdb_00001w42; pdb_00001ysh; 
			
				pdb_00002bo1; pdb_00003cpq; pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003jct; pdb_00003lfo; pdb_00003n4y; pdb_00003n4z; pdb_00003ra5; pdb_00003ra6; 
				pdb_00003vi6; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; 
				pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v3p; pdb_00004v4n; pdb_00004v5z; pdb_00004v6i; pdb_00004v6u; 
				pdb_00004v6x; pdb_00004v7e; pdb_00004v7f; pdb_00004v7r; pdb_00004v88; pdb_00004v8t; pdb_00004v8y; pdb_00004v8z; pdb_00004v91; pdb_00005aj0; pdb_00005apn; pdb_00005apo; 
				pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005gak; pdb_00005h4p; pdb_00005i4l; pdb_00005it7; pdb_00005jcs; 
				pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005lks; pdb_00005lyb; pdb_00005lzs; pdb_00005lzt; pdb_00005lzu; pdb_00005lzv; pdb_00005lzw; 
				pdb_00005lzx; pdb_00005lzy; pdb_00005lzz; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005obm; pdb_00005on6; pdb_00005t2c; 
				pdb_00005t62; pdb_00005t6r; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00006cb1; pdb_00006d90; pdb_00006d9j; pdb_00006elz; pdb_00006em5; pdb_00006ft6; pdb_00006gq1; 
				pdb_00006gqb; pdb_00006gqv; pdb_00006hcf; pdb_00006hcj; pdb_00006hcm; pdb_00006hcq; pdb_00006hd7; pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; 
				pdb_00006lqm; pdb_00006lsr; pdb_00006lss; pdb_00006lu8; pdb_00006m62; pdb_00006mtb; pdb_00006mtc; pdb_00006mtd; pdb_00006mte; pdb_00006n8j; pdb_00006n8k; pdb_00006n8l; 
				pdb_00006n8m; pdb_00006n8n; pdb_00006n8o; pdb_00006oig; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; pdb_00006om7; pdb_00006p5i; 
				pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qik; pdb_00006qt0; pdb_00006qtz; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; pdb_00006r7q; pdb_00006r84; 
				pdb_00006r86; pdb_00006r87; pdb_00006ri5; pdb_00006rzz; pdb_00006s05; pdb_00006s47; pdb_00006sgc; pdb_00006snt; pdb_00006sv4; pdb_00006swa; pdb_00006t4q; pdb_00006t59; 
				pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006tnu; pdb_00006uz7; pdb_00006w6l; pdb_00006woo; pdb_00006xa1; pdb_00006xiq; pdb_00006xir; pdb_00006y0g; 
				pdb_00006y2l; pdb_00006y57; pdb_00006y6x; pdb_00006ylg; pdb_00006ylh; pdb_00006ylx; pdb_00006yly; pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; 
				pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zvk; pdb_00007a01; pdb_00007b7d; pdb_00007bhp; pdb_00007bt6; pdb_00007btb; pdb_00007cpu; pdb_00007cpv; 
				pdb_00007f5s; pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; pdb_00007mpi; pdb_00007mpj; pdb_00007n8b; pdb_00007nac; pdb_00007nad; pdb_00007nrc; pdb_00007nrd; pdb_00007nwg; 
				pdb_00007nwh; pdb_00007nwi; pdb_00007o7y; pdb_00007o7z; pdb_00007o80; pdb_00007o81; pdb_00007obr; pdb_00007of1; pdb_00007oh3; pdb_00007ohq; pdb_00007ohr; pdb_00007ow7; 
				pdb_00007oyd; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qgg; pdb_00007qvp; pdb_00007qwq; pdb_00007qwr; pdb_00007qws; pdb_00007r72; 
				pdb_00007r7a; pdb_00007r81; pdb_00007rr5; pdb_00007tm3; pdb_00007too; pdb_00007top; pdb_00007tor; pdb_00007tut; pdb_00007u0h; pdb_00007ucj; pdb_00007uck; pdb_00007ug6; 
				pdb_00007uoo; pdb_00007uqb; pdb_00007uqz; pdb_00007v08; pdb_00007xnx; pdb_00007xny; pdb_00007z34; pdb_00007zjw; pdb_00007zjx; pdb_00007zpq; pdb_00007zrs; pdb_00007zs5; 
				pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008a3d; pdb_00008aaf; pdb_00008agt; pdb_00008agu; pdb_00008agv; pdb_00008agw; pdb_00008agx; pdb_00008agz; pdb_00008b5l; 
				pdb_00008b6c; pdb_00008bhf; pdb_00008bip; pdb_00008bjq; pdb_00008bn3; pdb_00008bpo; pdb_00008bqd; pdb_00008bqx; pdb_00008btk; pdb_00008c3a; pdb_00008ccs; pdb_00008cdl; 
				pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008cq7; pdb_00008cqw; pdb_00008cre; pdb_00008esq; 
				pdb_00008esr; pdb_00008etc; pdb_00008etg; pdb_00008eub; pdb_00008eug; pdb_00008eui; pdb_00008evp; pdb_00008evq; pdb_00008evr; pdb_00008evs; pdb_00008evt; pdb_00008ewb; 
				pdb_00008ewc; pdb_00008fky; pdb_00008fkz; pdb_00008fl2; pdb_00008fl3; pdb_00008fl4; pdb_00008fl6; pdb_00008fl7; pdb_00008fl9; pdb_00008fla; pdb_00008flb; pdb_00008flc; 
				pdb_00008fld; pdb_00008fle; pdb_00008flf; pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; pdb_00008hfr; pdb_00008hku; pdb_00008hkv; 
				pdb_00008hky; pdb_00008hkz; pdb_00008hl1; pdb_00008hl2; pdb_00008hl3; pdb_00008hl4; pdb_00008hl5; pdb_00008idt; pdb_00008idy; pdb_00008ie3; pdb_00008ifd; pdb_00008ife; 
				pdb_00008ine; pdb_00008inf; pdb_00008ink; pdb_00008ip8; pdb_00008ipa; pdb_00008ipb; pdb_00008ipd; pdb_00008ipx; pdb_00008ipy; pdb_00008ir1; pdb_00008ir3; pdb_00008jdj; 
				pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008jiv; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008oeq; pdb_00008ogj; pdb_00008oh6; pdb_00008ohd; pdb_00008oi5; 
				pdb_00008oj0; pdb_00008oj3; pdb_00008oj5; pdb_00008oj8; pdb_00008ova; pdb_00008ove; pdb_00008p2k; pdb_00008p4v; pdb_00008p8m; pdb_00008p8n; pdb_00008p8u; pdb_00008p9a; 
				pdb_00008pfr; pdb_00008q5i; pdb_00008q7z; pdb_00008q87; pdb_00008qfd; pdb_00008qoi; pdb_00008qyx; pdb_00008rjb; pdb_00008rjc; pdb_00008rjd; pdb_00008rl2; pdb_00008scb; 
				pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008ukb; pdb_00008ut0; 
				pdb_00008uti; pdb_00008v87; pdb_00008vft; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; 
				pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00009axt; pdb_00009axu; pdb_00009axv; pdb_00009bdl; pdb_00009bdn; pdb_00009bdp; pdb_00009c3h; pdb_00009f1b; 
				pdb_00009f1c; pdb_00009f1d; pdb_00009f9s; pdb_00009g8m; pdb_00009gmo
			
			

			» more