PROSITE logo
Black ribbon
We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE documentation PDOC00218
Phytochrome chromophore attachment site


View entry in original PROSITE document format
View entry in raw text format (no links)
PURL: https://purl.expasy.org/prosite/documentation/PDOC00218

Description

Phytochrome [1,2,3] is a plant protein that acts as a regulatory photoreceptor and which mediates red-light effects on a wide variety of physiological and molecular responses. Phytochrome can undergo a reversible photochemical conversion between a biologically inactive red light-absorbing form and the active far-red light-absorbing form. Phytochrome is a dimer of identical 124 Kd subunits, each of which contains a covalently attached linear tetrapyrrole chromophore.

The chromophore is attached to a cysteine which is located in a highly conserved region that can be used as a signature pattern.

Synechocystis strain PCC 6803 hypothetical protein slr0473 contains a domain similar to that of plants phytochrome and seems to also bind a chromophore.

Expert(s) to contact by email:

Partis M.D.

Last update:

November 1997 / Pattern and text revised; profile.

-------------------------------------------------------------------------------


Technical section

PROSITE methods (with tools and information) covered by this documentation:

PHYTOCHROME_2, PS50046; Phytochrome chromophore attachment site domain profile  (MATRIX)

PHYTOCHROME_1, PS00245; Phytochrome chromophore attachment site signature  (PATTERN)


References

1AuthorsSilverthorne J. Tobin E.M.
SourceBioEssays 7:18-23(1987).

2AuthorsQuail P.H.
TitlePhytochrome: a light-activated molecular switch that regulates plant gene expression.
SourceAnnu. Rev. Genet. 25:389-409(1991).
PubMed ID1812812
DOI10.1146/annurev.ge.25.120191.002133

3AuthorsQuail P.H.
TitleThe phytochromes: a biochemical mechanism of signaling in sight?
SourceBioEssays 19:571-579(1997).
PubMed ID9230690



PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.