PROSITE entry PS51801
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS51801 |
| Entry name [info] | ZF_CCHC_NOA |
| Accession [info] | PS51801 |
| Entry type [info] | MATRIX |
| Date [info] |
01-JUN-2016 CREATED;
13-FEB-2019 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51801 |
| Associated ProRule [info] | PRU01142 |
Name and characterization of the entry
| Description [info] | Zinc finger CCHC NOA-type profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=31; /DISJOINT: DEFINITION=PROTECT; N1=4; N2=28; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.3267822; R2=0.0114355; TEXT='-LogE'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3317.8935547; R2=0.5922078; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=1109; H_SCORE=3975; N_SCORE=15.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=365; H_SCORE=3534; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-102; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ...» more |
Numerical results [info]
| Total number of hits | 18 in 18 different sequences |
| Number of true positive hits | 18 in 18 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Feature key [info] | ZN_FING |
| Feature description [info] | CCHC NOA-type |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
18 sequences
NEMO_BOVIN (Q95KU9), NEMO_DROME (Q9GYV5), NEMO_HUMAN (Q9Y6K9),» more
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| PDB [Detailed view] |
5 PDB
2JVX; 2JVY; 2LO4; 5AAY; 5AAZ |