ProRule PRU00193
General rule information
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| Accession | PRU00193 |
| Dates | 12-DEC-2003 (Created)
19-NOV-2022 (Last updated, Version 14) |
| Data class | Domain; |
| Predictors |
PROSITE; PS50045; SIGMA54_INTERACT_4 |
Name | Sigma-54 factor interaction domain |
| Function | Undefined |
| Scope(s) |
Bacteria |
| Example(s) | P41789 (NTRC_SALTY); |
Propagated annotation
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Keywords
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Gene Ontology
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| GO:0005524; Molecular function:ATP binding |
| GO:0000166; Molecular function:nucleotide binding |
| GO:0006355; Biological process:regulation of DNA-templated transcription |
| GO:0006351; Biological process:DNA-templated transcription |
Cross-references
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| PROSITE | PS00688; SIGMA54_INTERACT_3; 1; |
| PROSITE | PS00676; SIGMA54_INTERACT_2; 1; |
| PROSITE | PS00675; SIGMA54_INTERACT_1; 1; |
Features
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| From: PS50045 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | /note="Sigma-54 factor interaction #" | |||||||||
| BINDING | 29 | 36 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
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| BINDING | 92 | 101 | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" |
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Additional information
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| Size range | 200-270 amino acids |
| Related rules |
None |
| Fusion | None |
| Repeats | 1 |
| Topology | Undefined |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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- UniProtKB/Swiss-Prot sets
Bacteria [160] All [ 160 ]
- Retrieve set of proteins with 3D structure for this domain