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| annotation rule: PRU00193 |
General rule information
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| Accession | PRU00193 |
| Dates | 12-DEC-2003 (Created) 16-DEC-2016 (Last updated, Version 10) |
| Data class | Domain |
| Predictors | PROSITE; PS50045; SIGMA54_INTERACT_4 |
| Name | Sigma-54 factor interaction domain |
| Function | Undefined. |
Propagated annotation
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Cross-references
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| PROSITE | PS00688; SIGMA54_INTERACT_3; 1; |
| PS00676; SIGMA54_INTERACT_2; 1; | |
| PS00675; SIGMA54_INTERACT_1; 1; |
Gene Ontology
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GO:0005524; Molecular function: ATP binding.
GO:0000166; Molecular function: nucleotide binding.
GO:0006355; Biological process: regulation of transcription, DNA-templated.
GO:0006351; Biological process: transcription, DNA-templated.
GO:0000166; Molecular function: nucleotide binding.
GO:0006355; Biological process: regulation of transcription, DNA-templated.
GO:0006351; Biological process: transcription, DNA-templated.
Keywords
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Features
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| From: PS50045 | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| DOMAIN | from | to | Sigma-54 factor interaction # | |||||||||
| NP_BIND | 29 | 36 | ATP | |||||||||
| NP_BIND | 92 | 101 | ATP | |||||||||
Additional information
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| Size range | 200-270 amino acids |
| Related rules | None |
| Repeats | 1 |
| Topology | Undefined |
| Example | P41789 (NTRC_SALTY) |
| Scope | Bacteria |
PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.
UniProtKB rule member sequences
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UniProtKB/Swiss-Prot sets
Bacteria [156]
- Retrieve set of proteins with 3D structure for this domain