PRU00193

General rule information [?]

Accession	PRU00193
Dates	12-DEC-2003 (Created) 19-NOV-2022 (Last updated, Version 14)

Data class

Domain

Predictors

PROSITE; PS50045; SIGMA54_INTERACT_4

Name	Sigma-54 factor interaction domain

Function

Undefined.

Propagated annotation [?]

Cross-references [?]

PROSITE	PS00688; SIGMA54_INTERACT_3; 1;
	PS00676; SIGMA54_INTERACT_2; 1;
	PS00675; SIGMA54_INTERACT_1; 1;

Gene Ontology [?]

GO:0005524; Molecular function: ATP binding.
GO:0000166; Molecular function: nucleotide binding.
GO:0006355; Biological process: regulation of DNA-templated transcription.
GO:0006351; Biological process: DNA-templated transcription.

Keywords [?]

ATP-binding
Nucleotide-binding
Transcription
Transcription regulation

Features [?]

From: PS50045

Key From To Description Tag Condition FTGroup

DOMAIN from to Sigma-54 factor interaction #

BINDING 29 36 /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616

BINDING 92 101 /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616

Additional information [?]

Size range	200-270 amino acids
Related rules	None
Repeats	1
Topology	Undefined
Example	P41789 (NTRC_SALTY)
Scope	Bacteria

PROSITE is copyrighted by the SIB Swiss Institute of Bioinformatics and distributed under the Creative Commons Attribution-NonCommercial-NoDerivatives (CC BY-NC-ND 4.0) License, see prosite_license.html.

View rule in raw text format (no links)

UniProtKB rule member sequences [?]

UniProtKB/Swiss-Prot sets

Bacteria [160]
Retrieve set of proteins with 3D structure for this domain