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PROSITE entry PS51711


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51711
Entry name [info] G_FEOB
Accession [info] PS51711
Entry type [info] MATRIX
Date [info] 01-MAR-2014 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51711
Associated ProRule [info] PRU01048

Name and characterization of the entry

Description [info] FeoB-type guanine nucleotide-binding (G) domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=163;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=158;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4282746; R2=0.0096576; TEXT='-LogE';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=23336.6816406; R2=10.9981098; PRIORITY=1; TEXT='Heuristic 0.5%';
/CUT_OFF: LEVEL=0; SCORE=2338; H_SCORE=49050; N_SCORE=25.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=422; H_SCORE=27978; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-39; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255;
...
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Post-processing [info]

COMPETES_HIT_WITH PS51705; PS51706; PS51709; PS51710; PS51712; PS51713; PS51714; PS51715; PS51716; PS51717; PS51718; PS51719; PS51720; PS51721; PS51722

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 28 in 28 different sequences
Number of true positive hits 28 in 28 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] FeoB-type G
Version [info] 3

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
28 sequences

FEOAB_PORGI (Q7MV19), FEOB2_PORGI (Q7MVL1), FEOB_CAMJE  (Q9PMQ9), 
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PDB
[Detailed view]
13 PDB

2WJG; 2WJH; 2WJI; 2WJJ; 3HYR; 3HYT; 3I8S; 3I8X; 3I92; 3IBY; 4Q00; 4Q5I;
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