PROSITE entry PS51905
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General information about the entry
| Entry name [info] | ZF_UBZ1 |
| Accession [info] | PS51905 |
| Entry type [info] | MATRIX |
| Date [info] |
13-NOV-2019 CREATED;
07-APR-2021 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51905 |
| Associated ProRule [info] | PRU01253 |
Name and characterization of the entry
| Description [info] | Zinc finger UBZ1-type profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=27; /DISJOINT: DEFINITION=PROTECT; N1=3; N2=25; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.2411482; R2=0.0073204; TEXT='-LogE'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=2682.5251465; R2=0.6256983; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=1197; H_SCORE=3431; N_SCORE=11.0; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=582; H_SCORE=3047; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-22; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='W'; M=-42, 43,-42, 14,-37,-48, 43, 4,-36,-44,-40, -9, 38, 34,-40,-20,-42,-46,120,-25; /M: SY='K'; M=-40,-52,-39,-26, 4,-50,-34,-40, 73, 5, 35,-31,-45,-21, 48,-37,-36,-40,-46,-33; /M: SY='V'; M=-31,-47,-29, 30,-45,-45,-36,-10, 19,-37,-33, 29,-43, 37,-13, 10, 18, 39,-58,-41; /M: SY='C'; M=-37,146,-57,-57,-47,-52,-57,-54,-53,-45,-45,-43,-68,-60,-59,-40,-37,-42,-77,-58; /M: SY='P'; M=-41,-66,-36, 25,-61,-45,-43,-51,-35,-59,-47,-46,114,-36,-47,-38,-35,-54,-55,-58; /M: SY='M'; M=-40,-48,-52, 6, 35,-59,-43, 48,-47, 36, 69,-50,-51,-42,-48,-48,-37, 5,-44,-24; /M: SY='C'; M=-37,146,-57,-57,-47,-52,-57,-54,-53,-45,-45,-43,-68,-60,-59,-40,-37,-42,-77,-58; /M: SY='Q'; M=-31,-53, 27, 28,-59, 30,-32,-56, 29,-54,-45, -9, -4, 58,-25, 24,-32,-53,-54,-44; /M: SY='E'; M= -2,-49,-25, 61,-44,-47,-36,-35, 38, 15,-32,-34,-40,-21,-25, 8,-32, 5,-53,-42; /M: SY='Q'; M=-35,-53,-38, 12,-43, 3,-35, 23,-25, -7, 34,-35,-45, 64, 33,-12,-14, 1,-51,-37; /M: SY='F'; M=-51,-48,-62,-58,108,-58,-39,-25,-53,-17,-26,-52,-62,-62,-50,-49,-43,-30,-15, 43; /M: SY='P'; M=-38,-63,-37, 12,-60,-42,-43,-50,-36,-59,-46,-44,111,-36,-47, 11,-32,-53,-55,-56; /I: I=-24; MD=-61; /M: SY='P'; M= 27,-53,-49,-41,-50,-44,-50,-33,-45, -8,-37,-48, 79,-44,-51, 11,-33, 19,-59,-51; D=-24; /I: I=-24; MD=-61; /M: SY='H'; M=-37,-54, 38, 15,-58, 5, 51,-58,-14,-56,-47, 31,-45, 30,-35, 22, 12,-54,-67,-43; D=-24; /I: I=-24; MD=-61; /M: SY='Y'; M=-50, 47,-63,-63, -1,-65,-46, 19,-58,-38,-39,-57,-68,-56,-59, 3,-46, 7,-40, 70; D=-24; /I: I=-24; MI=0; MD=-61; IM=0; DM=-61; /M: SY='D'; M=-33,-50, 66, 31,-57,-37,-31,-54,-28,-55,-49, 24, 24, 11,-36, 40, 7,-50,-64,-46; /M: SY='Q'; M=-40,-56, 17,-19, 42,-47,-29,-47, 39,-42,-36,-28,-46, 80, 32,-32,-38,-48,-42,-26; /M: SY='Q'; M=-32,-52, 42,-20,-58, 26,-30,-38,-26,-51,-42, 28,-42, 76,-30, 18, 11,-49,-57,-43; /M: SY='A'; M= 38,-46, 29,-32,-41,-30, 27, 21, 13, -3,-29,-33,-46, -2,-36,-10,-31, 20,-56,-38; /M: SY='F'; M=-48,-46,-59,-56, 98,-58,-41,-22,-52, 24,-22,-51,-59,-57,-50,-46, 1,-27,-21, 25; /M: SY='E'; M=-38,-55,-21, 75,-40,-54,-31, 6,-22, 8,-32,-37,-40, 29, 20,-36,-37,-36,-47, 15; /M: SY='D'; M=-19,-54, 56, 41,-56,-20,-31,-57, 33,-53,-46,-24,-41,-20, 51,-31, 4,-50,-58,-44; /M: SY='H'; M=-45,-57,-29,-29,-43,-47,138,-62,-34,-44,-29,-18,-46,-23,-28,-35,-44,-61,-79,-12; /M: SY='V'; M=-32,-44,-57,-52,-27,-59,-54, 39,-49, 18, 41,-51,-52,-49,-51,-42, 6, 69,-57,-34; /M: SY='H'; M=-41,-53, 43, 50, 46,-45, 50,-47,-28,-25,-39, 35,-44, 24,-33,-33,-36,-47,-49,-26; /M: SY='C'; M=-26, 78,-39,-41,-45, 8,-41,-41,-38,-40, 38,-27,-43,-36,-44, 53, 54,-35,-61,-43; /M: SY='H'; M=-45,-57,-29,-29,-43,-47,138,-62,-34,-44,-29,-18,-46,-23,-28,-35,-44,-61,-79,-12; /I: E1=0; IE=-255; DE=-255;» more |
Post-processing [info]
| COMPETES_HIT_WITH | PS50157; PS51801; PS51906; PS51907; PS51908 |
Numerical results [info]
| Total number of hits | 32 in 24 different sequences |
| Number of true positive hits | 32 in 24 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 2 |
| Feature key [info] | ZN_FING |
| Feature description [info] | UBZ1-type |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
24 sequences
CACO1_BOVIN (Q2KJ21), CACO1_HUMAN (Q9P1Z2), CACO1_MOUSE (Q8CGU1), CACO1_PONAB (Q5RD60), CACO1_RAT (Q66HR5), CACO2_BOVIN (O18737), CACO2_HUMAN (Q13137), CACO2_MACFA (Q4R914), CACO2_PONAB (Q5R7H1), CACO2_XENTR (Q6DF48), SPNF_DROME (Q9V9Y9), TANK_HUMAN (Q92844), TANK_MOUSE (P70347), TAXB1_BOVIN (Q2KJE0), TAXB1_HUMAN (Q86VP1), TAXB1_MOUSE (Q3UKC1), TAXB1_PONAB (Q5R4U3), TAXB1_RAT (Q66HA4), TAXB1_XENTR (Q6P3P1), TBKB1_HUMAN (A7MCY6), TBKB1_MOUSE (A2A9T0), TBKB1_RAT (Q6DG50), TXB1A_DANRE (Q1LWB0), TXB1B_DANRE (Q6P132)» more
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| PDB [Detailed view] |
9 PDB
2M7Q; 2MXP; 4BMJ; 4XKL; 4Z4K; 4Z4M; 5AAQ; 5AAS; 5YT6 |