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| Entry: PS51906 |
General information about the entry
| Entry name [info] | ZF_UBZ2 |
| Accession [info] | PS51906 |
| Entry type [info] | MATRIX |
| Date [info] |
13-NOV-2019 CREATED;
07-APR-2021 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC51905 |
| Associated ProRule [info] | PRU01254 |
Name and characterization of the entry
| Description [info] | Zinc finger UBZ2-type profile. |
| Matrix / Profile [info] |
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=37; /DISJOINT: DEFINITION=PROTECT; N1=4; N2=34; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=3.0545666; R2=0.0077926; TEXT='-LogE'; /NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=3947.9506836; R2=0.6822177; PRIORITY=1; TEXT='Heuristic 5.0%'; /CUT_OFF: LEVEL=0; SCORE=956; H_SCORE=4600; N_SCORE=10.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=443; H_SCORE=4250; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: M0=-45; D=-100; I=-100; B1=-1000; E1=-1000; MI=-255; MD=-255; IM=-255; DM=-255; ... A C D E F G H I K L M N P Q R S T V W Y /I: B1=0; BI=-255; BD=-255; /M: SY='L'; M= -74, -78, -90, -83, -54, -93, -79, -43, -24, 71, -4, -87, -90, -78, -80, -81, -3, 4, -84, -65; /M: SY='Q'; M= -20, -88, 14, 8, -89, -77, -31, -82, -52, -44, -71, -28, -77, 81, 33, -12, -2, -48, -88, -74; /M: SY='S'; M= -15, 50, -70, -68, -81, -42, -57, -79, -68, -24, -74, -48, -78, 19, -48, 77, -6, -73, -92, -76; /M: SY='C'; M= -71, 144, -91, -91, -81, -87, -91, -88, -87, -79, -79, -77,-102, -95, -93, -74, -71, -76,-111, -92; /M: SY='P'; M= -76,-102, -77, -65, -96, -78, -80, -84, -73, -94, -80, -83, 118, -76, -85, -74, -69, -89, -89, -93; /M: SY='M'; M= -72, -80, -94, -85, -59, -88, -68, 15, -79, 13, 123, -82, -83, -71, -77, -82, -70, -49, -83, -61; /M: SY='C'; M= -71, 144, -91, -91, -81, -87, -91, -88, -87, -79, -79, -77,-102, -95, -93, -74, -71, -76,-111, -92; /M: SY='Q'; M= -48, -1, -74, -58, -74, -33, -66, -65, -62, 39, -55, -70, -83, 96, -62, -67, -72, -69, -82, -69; /M: SY='K'; M= 23, -80, -75, -19, -73, -79, 0, -12, 31, 4, 28, -71, -79, 24, -63, -66, -10, 12, -87, -71; /M: SY='D'; M= 4, -83, 41, 39, -83, -77, -70, -70, -27, -25, -71, -26, -17, 18, -44, -23, -2, 10, -93, -77; /M: SY='F'; M= -83, -79, -95, -91, 112, -91, -75, -55, -86, -16, -57, -85, -94, -96, -83, -82, -75, -61, -49, -28; /M: SY='P'; M= 38, -79, -14, 27, -81, -16, -41, -73, -63, -28, -69, -65, 73, -61, -59, 0, 6, -56, -84, -77; /M: SY='P'; M= 1, -81, -51, -43, -80, -15, -72, -70, -44, -33, -69, -66, 89, -65, -19, 33, 1, -15, -84, -78; /M: SY='G'; M= -58, -79, -64, -36, -82, 62, 30, -85, -14, -82, -8, -4, 2, -59, 29, 31, -13, -80, -83, -73; /I: I=-4; MD=-9; /M: SY='L'; M= -70, -75, -86, -77, 59, -84, -71, -43, -77, 60, 24, -80, -85, 4, -75, -16, -66, -6, 49, -30; D=-4; /I: I=-4; MI=0; MD=-9; IM=0; DM=-9; /M: SY='T'; M= 36, -68, -3, -62, -70, -61, -65, -68, -62, -71, -19, -53, -67, -60, -68, 57, 67, -61, -81, 14; D=-4; /I: I=-4; DM=-9; /M: SY='Q'; M= -64, -89, -61, -41, -90, -71, -54, -77, -47, -65, 4, -57, 47, 118, -48, -55, -65, -79, -77, -67; D=-4; /I: I=-4; DM=-9; /M: SY='M'; M= -68, -73, -88, -79, -47, -86, -68, 17, -77, 68, 94, -81, -82, -70, -75, -78, -65, -41, -75, -56; /M: SY='D'; M= -65, -80, 109, 43, -87, -65, -53, -85, -52, -83, -81, -38, -64, -50, -61, -9, -57, -81, -97, -71; /M: SY='I'; M= -62, 52, -76, -70, -58, -83, -74, 74, -16, -45, -28, -68, -75, -14, 46, -66, -14, 37, -79, -61; /M: SY='D'; M= -67, -81, 117, 7, -88, -65, -53, -86, -54, -84, -83, -36, -66, -53, -63, -56, -57, -83,-102, -71; /M: SY='S'; M= -13, -69, -59, -63, -77, 62, -63, -78, -59, -79, -71, -21, -66, -55, -12, 82, -47, -54, -79, -70; /M: SY='H'; M= -69, -81, -53, -53, -68, -71, 149, -86, -58, -68, -54, -43, -70, -47, -52, -59, -68, -86,-103, -37; /M: SY='L'; M= -67, -70, -85, -78, -42, -87, -71, 41, -78, 84, -29, -82, -82, -71, -76, -77, -62, -35, -71, -54; /M: SY='A'; M= 99, -61, -68, -60, -76, -49, -69, -65, -63, -67, -61, -62, -66, -59, -67, -41, -52, -52, -76, -71; /M: SY='Q'; M= 1, -79, -55, -2, -82, -66, -52, -71, 12, -70, -60, -8, -67, 106, 33, -3, -58, -18, -75, -63; /M: SY='C'; M= -61, 154, -81, -81, -71, -77, -81, -78, -77, -69, -69, -67, -92, -85, -83, -64, -61, -66,-101, -82; /M: SY='L'; M= -67, -69, -85, -77, -40, -86, -68, -32, -78, 92, -28, -84, -84, -71, -75, -77, -63, -39, -71, -53; /M: SY='S'; M= 67, -63, -60, -33, -75, -49, -63, -70, -59, -72, -66, -52, -65, -53, -64, 82, -43, -59, -79, -69; /M: SY='E'; M= -3, -77, 21, 90, -79, 18, -57, -78, -48, -22, -68, -54, -60, -3, -57, -8, -59, -72, -80, -71; /I: I=-30; MD=-77; /M: SY='S'; M= -9, -28, -64, -63, -68, -59, -62, -58, -60, -46, 74, -7, -69, -55, -21, 81, -3, 0, -83, -64; D=-30; /I: I=-30; MI=-77; IM=-77; DM=-77; /M: SY='T'; M= 24, -65, 20, -6, -73, -60, -59, -40, -54, -69, -64, 56, -64, -55, -23, 4, 80, -59, -87, -68; /M: SY='D'; M= -48, -76, 77, 63, -74, -14, -58, -61, -54, -50, 46, -50, -65, -50, -62, -57, -22, 23, -87, -68; /M: SY='D'; M= -67, -81, 117, 9, -88, -65, -53, -86, -54, -84, -83, -36, -66, -53, -63, -56, -57, -83,-102, -71; /M: SY='V'; M= -16, -68, -82, -76, -54, -30, -75, 20, -72, -23, 81, -74, -76, -71, -73, -66, -54, 82, -82, -59; /M: SY='M'; M= -35, -69, 1, -17, -61, -44, -69, -8, -62, -49, 61, -61, -69, 25, -66, -54, 60, 57, 43, -60; /M: SY='W'; M= -76, 33,-102, -82, -45, -76,-103, -76, -74, -73, -76, -94, -82, -75, -78, -82, -39, -88, 173, -32; /I: E1=0; IE=-255; DE=-255;» more |
Post-processing [info]
| COMPETES_HIT_WITH | PS50157; PS51801; PS51905; PS51907; PS51908 |
Numerical results [info]
| Total number of hits | 4 in 4 different sequences |
| Number of true positive hits | 4 in 4 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Matrix type [info] | protein_domain |
| Scaling database [info] | reversed |
| Author [info] | CJA_Sigrist |
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Feature key [info] | ZN_FING |
| Feature description [info] | UBZ2-type |
| Version [info] | 3 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
4 sequences
FAP20_BOVIN (A5PKK9 ), FAP20_HUMAN (Q6NZ36 ), FAP20_MOUSE (Q3UN58 ), FAP20_RAT (D4AAA5 )» more
|
| PDB [Detailed view] |
3 PDB
2MUQ; 2MUR; 3WWQ |
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